RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 RPL13AP40429 203 aaKnown RBP14.01□□□□□ -0.17
ECHDC1-214ENST00000474289 TCF15Q12870 199 aa14.01□□□□□ -0.17
ECHDC1-214ENST00000474289 ATXN8Q156A1 80 aa14.01□□□□□ -0.17
ECHDC1-214ENST00000474289 PRR30Q53SZ7 412 aaPredicted RBP14.01□□□□□ -0.17
ECHDC1-214ENST00000474289 VMO1Q7Z5L0 202 aa14.01□□□□□ -0.17
ECHDC1-214ENST00000474289 C15orf53Q8NAA6 179 aa14.01□□□□□ -0.17
ECHDC1-214ENST00000474289 ITLN2Q8WWU7 325 aaPredicted RBP14.01□□□□□ -0.17
ECHDC1-214ENST00000474289 TIMM17AQ99595 171 aa14.01□□□□□ -0.17
ECHDC1-214ENST00000474289 GNRH2O43555 120 aa14.01□□□□□ -0.17
ECHDC1-214ENST00000474289 IGHV4-39P01824 125 aa14.01□□□□□ -0.17
ECHDC1-214ENST00000474289 RNASE3P12724 160 aaKnown RBP14.01□□□□□ -0.17
ECHDC1-214ENST00000474289 EBI3Q14213 229 aa14.01□□□□□ -0.17
ECHDC1-214ENST00000474289 CD3EP07766 207 aa14□□□□□ -0.17
ECHDC1-214ENST00000474289 POLR2KP53803 58 aaKnown RBP14□□□□□ -0.17
ECHDC1-214ENST00000474289 LINC00315P59091 139 aa14□□□□□ -0.17
ECHDC1-214ENST00000474289 DEFB1P60022 68 aa14□□□□□ -0.17
ECHDC1-214ENST00000474289 Q1RN00 199 aa14□□□□□ -0.17
ECHDC1-214ENST00000474289 POM121L12Q8N7R1 296 aa14□□□□□ -0.17
ECHDC1-214ENST00000474289 Q8NA96 180 aa14□□□□□ -0.17
ECHDC1-214ENST00000474289 U3KQE9 123 aa14□□□□□ -0.17
ECHDC1-214ENST00000474289 MUSTN1Q8IVN3 82 aa14□□□□□ -0.17
ECHDC1-214ENST00000474289 M0R1W7 72 aa13.99□□□□□ -0.17
ECHDC1-214ENST00000474289 ATP6V0E1O15342 81 aa13.99□□□□□ -0.17
ECHDC1-214ENST00000474289 MED14OSP0DP75 135 aa13.99□□□□□ -0.17
ECHDC1-214ENST00000474289 LINC01560Q8TB33 94 aa13.99□□□□□ -0.17
ECHDC1-214ENST00000474289 LINC00477Q96M19 166 aa13.99□□□□□ -0.17
ECHDC1-214ENST00000474289 TTC28Q96AY4 2481 aa13.99□□□□□ -0.17
ECHDC1-214ENST00000474289 IGHV4OR15-8A0A075B7B6 117 aa13.99□□□□□ -0.17
ECHDC1-214ENST00000474289 A0A087WW49 117 aa13.99□□□□□ -0.17
ECHDC1-214ENST00000474289 C9orf139Q6ZV77 190 aa13.99□□□□□ -0.17
ECHDC1-214ENST00000474289 LINC01600Q96MT4 127 aa13.99□□□□□ -0.17
ECHDC1-214ENST00000474289 KIF25-AS1Q9Y6Z4 181 aa13.99□□□□□ -0.17
ECHDC1-214ENST00000474289 BEX4Q9NWD9 120 aaPredicted RBP13.98□□□□□ -0.17
ECHDC1-214ENST00000474289 TRBV10-2A0A0K0K1G8 114 aa13.98□□□□□ -0.17
ECHDC1-214ENST00000474289 MED13LQ71F56 2210 aa13.97□□□□□ -0.17
ECHDC1-214ENST00000474289 ASH1LQ9NR48 2969 aaKnown RBP13.97□□□□□ -0.17
ECHDC1-214ENST00000474289 G3V318 75 aa13.97□□□□□ -0.17
ECHDC1-214ENST00000474289 H3BMM0 161 aa13.97□□□□□ -0.17
ECHDC1-214ENST00000474289 RNASE4P34096 147 aaKnown RBP13.97□□□□□ -0.17
ECHDC1-214ENST00000474289 UBE2WQ96B02 151 aa13.97□□□□□ -0.17
ECHDC1-214ENST00000474289 ZFHX3Q15911 3703 aa13.97□□□□□ -0.17
ECHDC1-214ENST00000474289 OR10J6PQ8NGY7 276 aa13.96□□□□□ -0.17
ECHDC1-214ENST00000474289 LGALS9O00182 355 aa13.96□□□□□ -0.17
ECHDC1-214ENST00000474289 LEPROTO15243 131 aa13.96□□□□□ -0.17
ECHDC1-214ENST00000474289 KLK9Q2XQG4 91 aa13.96□□□□□ -0.17
ECHDC1-214ENST00000474289 SUMO4Q6EEV6 95 aa13.96□□□□□ -0.17
ECHDC1-214ENST00000474289 C1orf122Q6ZSJ8 110 aa13.96□□□□□ -0.17
ECHDC1-214ENST00000474289 JPT2Q9H910 190 aa13.96□□□□□ -0.17
ECHDC1-214ENST00000474289 KLK9Q9UKQ9 250 aa13.96□□□□□ -0.17
ECHDC1-214ENST00000474289 IGHV3-64A0A075B6Q5 118 aa13.95□□□□□ -0.18
ECHDC1-214ENST00000474289 TMEM223A0PJW6 202 aa13.95□□□□□ -0.18
ECHDC1-214ENST00000474289 VCYO14598 125 aa13.95□□□□□ -0.18
ECHDC1-214ENST00000474289 TRIAP1O43715 76 aa13.95□□□□□ -0.18
ECHDC1-214ENST00000474289 EEF1AKMT3Q96AZ1 226 aa13.95□□□□□ -0.18
ECHDC1-214ENST00000474289 ZNF292O60281 2723 aa13.95□□□□□ -0.18
ECHDC1-214ENST00000474289 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.95□□□□□ -0.18
ECHDC1-214ENST00000474289 SDHAF1A6NFY7 115 aa13.95□□□□□ -0.18
ECHDC1-214ENST00000474289 NXPH4O95158 308 aa13.95□□□□□ -0.18
ECHDC1-214ENST00000474289 GRNP28799 593 aaKnown RBP13.94□□□□□ -0.18
ECHDC1-214ENST00000474289 OPRPNQ99935 248 aaPredicted RBP13.94□□□□□ -0.18
ECHDC1-214ENST00000474289 ANKHD1Q8IWZ3 2542 aaKnown RBP13.94□□□□□ -0.18
ECHDC1-214ENST00000474289 SPTBN2O15020 2390 aa13.94□□□□□ -0.18
ECHDC1-214ENST00000474289 TRBV30A0A0K0K1B3 111 aa13.94□□□□□ -0.18
ECHDC1-214ENST00000474289 OOSP1A8MZH6 123 aa13.94□□□□□ -0.18
ECHDC1-214ENST00000474289 TRBV7-1A0A0A6YYK4 115 aa13.93□□□□□ -0.18
ECHDC1-214ENST00000474289 MEIG1Q5JSS6 88 aa13.93□□□□□ -0.18
ECHDC1-214ENST00000474289 MDFICQ9P1T7 246 aa13.93□□□□□ -0.18
ECHDC1-214ENST00000474289 A0A087WWL8 130 aa13.92□□□□□ -0.18
ECHDC1-214ENST00000474289 F6UB75 175 aa13.92□□□□□ -0.18
ECHDC1-214ENST00000474289 C2orf82Q6UX34 121 aa13.92□□□□□ -0.18
ECHDC1-214ENST00000474289 FAM19A4Q96LR4 140 aa13.92□□□□□ -0.18
ECHDC1-214ENST00000474289 TRBV27A0A0K0K1C4 114 aa13.92□□□□□ -0.18
ECHDC1-214ENST00000474289 OVOL1O14753 267 aa13.92□□□□□ -0.18
ECHDC1-214ENST00000474289 ZNF580Q9UK33 172 aa13.92□□□□□ -0.18
ECHDC1-214ENST00000474289 M0R2P5 195 aa13.91□□□□□ -0.18
ECHDC1-214ENST00000474289 FOXC1Q12948 553 aa13.91□□□□□ -0.18
ECHDC1-214ENST00000474289 MINOS1Q5TGZ0 78 aa13.91□□□□□ -0.18
ECHDC1-214ENST00000474289 MINOS1-NBL1R4GNA1 71 aa13.91□□□□□ -0.18
ECHDC1-214ENST00000474289 F5H697 171 aa13.91□□□□□ -0.18
ECHDC1-214ENST00000474289 H7C423 109 aa13.91□□□□□ -0.18
ECHDC1-214ENST00000474289 ZNF22P17026 224 aaPredicted RBP13.91□□□□□ -0.18
ECHDC1-214ENST00000474289 SOCS3O14543 225 aa13.9□□□□□ -0.18
ECHDC1-214ENST00000474289 SPANXA1Q9NS26 97 aa13.9□□□□□ -0.18
ECHDC1-214ENST00000474289 ZNF256Q9Y2P7 627 aaPredicted RBP13.9□□□□□ -0.18
ECHDC1-214ENST00000474289 A0A0J9YXY3 114 aa13.9□□□□□ -0.18
ECHDC1-214ENST00000474289 APRG1Q8IVJ8 170 aa13.9□□□□□ -0.18
ECHDC1-214ENST00000474289 HRNRQ86YZ3 2850 aaPredicted RBP13.89□□□□□ -0.19
ECHDC1-214ENST00000474289 A0A0J9YX75 114 aa13.89□□□□□ -0.19
ECHDC1-214ENST00000474289 IGHV1-69P01742 117 aa13.89□□□□□ -0.19
ECHDC1-214ENST00000474289 CHCHD5Q9BSY4 110 aa13.88□□□□□ -0.19
ECHDC1-214ENST00000474289 BRI3O95415 125 aa13.88□□□□□ -0.19
ECHDC1-214ENST00000474289 ZNF56Q15929 161 aa13.88□□□□□ -0.19
ECHDC1-214ENST00000474289 MRPL23Q16540 153 aaKnown RBP13.88□□□□□ -0.19
ECHDC1-214ENST00000474289 UNQ9165/PRO28630Q6UXU0 137 aa13.88□□□□□ -0.19
ECHDC1-214ENST00000474289 ICOSQ9Y6W8 199 aa13.88□□□□□ -0.19
ECHDC1-214ENST00000474289 RIF1Q5UIP0 2472 aaKnown RBP13.87□□□□□ -0.19
ECHDC1-214ENST00000474289 ADARB2-AS1A8MUL3 147 aa13.87□□□□□ -0.19
ECHDC1-214ENST00000474289 UBE2E1P51965 193 aa13.87□□□□□ -0.19
ECHDC1-214ENST00000474289 LITAFQ99732 161 aa13.86□□□□□ -0.19
ECHDC1-214ENST00000474289 A0A0J9YXV3 536 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms