RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 NHP2Q9NX24 153 aaKnown RBP2.43□□□□□ -2.02
BRCA1-212ENST00000473961 HIGD1AQ9Y241 93 aa2.43□□□□□ -2.02
BRCA1-212ENST00000473961 THADAQ6YHU6 1953 aa2.43□□□□□ -2.02
BRCA1-212ENST00000473961 SPTBP11277 2137 aa2.42□□□□□ -2.02
BRCA1-212ENST00000473961 IGKV1D-43A0A0B4J1Z2 117 aa2.42□□□□□ -2.02
BRCA1-212ENST00000473961 HIGD1CA8MV81 97 aa2.42□□□□□ -2.02
BRCA1-212ENST00000473961 A8MWV9 139 aa2.42□□□□□ -2.02
BRCA1-212ENST00000473961 C8orf87E5RJ46 101 aa2.42□□□□□ -2.02
BRCA1-212ENST00000473961 F5H768 121 aa2.42□□□□□ -2.02
BRCA1-212ENST00000473961 FSTL3O95633 263 aa2.42□□□□□ -2.02
BRCA1-212ENST00000473961 IGHG2P01859 326 aa2.42□□□□□ -2.02
BRCA1-212ENST00000473961 RBP4P02753 201 aa2.42□□□□□ -2.02
BRCA1-212ENST00000473961 SCTP09683 121 aa2.42□□□□□ -2.02
BRCA1-212ENST00000473961 CD52P31358 61 aa2.42□□□□□ -2.02
BRCA1-212ENST00000473961 GLRXP35754 106 aa2.42□□□□□ -2.02
BRCA1-212ENST00000473961 DSCR4P56555 118 aaPredicted RBP2.42□□□□□ -2.02
BRCA1-212ENST00000473961 TNFAIP6P98066 277 aaPredicted RBP2.42□□□□□ -2.02
BRCA1-212ENST00000473961 HES1Q14469 280 aa2.42□□□□□ -2.02
BRCA1-212ENST00000473961 EDDM3AQ14507 147 aa2.42□□□□□ -2.02
BRCA1-212ENST00000473961 PIGYQ3MUY2 71 aa2.42□□□□□ -2.02
BRCA1-212ENST00000473961 FAM19A5Q7Z5A7 132 aaPredicted RBP2.42□□□□□ -2.02
BRCA1-212ENST00000473961 LYPD1Q8N2G4 141 aa2.42□□□□□ -2.02
BRCA1-212ENST00000473961 C1orf64Q8NEQ6 169 aa2.42□□□□□ -2.02
BRCA1-212ENST00000473961 OR11H6Q8NGC7 330 aa2.42□□□□□ -2.02
BRCA1-212ENST00000473961 OR4C13Q8NGP0 309 aa2.42□□□□□ -2.02
BRCA1-212ENST00000473961 SPTSSAQ969W0 71 aa2.42□□□□□ -2.02
BRCA1-212ENST00000473961 CARD19Q96LW7 228 aa2.42□□□□□ -2.02
BRCA1-212ENST00000473961 PRADC1Q9BSG0 188 aa2.42□□□□□ -2.02
BRCA1-212ENST00000473961 TP53TG1Q9Y2A0 90 aa2.42□□□□□ -2.02
BRCA1-212ENST00000473961 SVILO95425 2214 aa2.42□□□□□ -2.02
BRCA1-212ENST00000473961 NCOA6Q14686 2063 aaPredicted RBP2.41□□□□□ -2.02
BRCA1-212ENST00000473961 KIAA1549Q9HCM3 1950 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 FREM3P0C091 2139 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 TRBV25-1A0A075B6N4 114 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 IGHV3OR15-7A0A075B7D8 119 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 TRAV4A0A0B4J268 109 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 IGKV1-12A0A0C4DH73 117 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 MYMXA0A1B0GTQ4 84 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 C5orf49A4QMS7 147 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 H0YGG7 62 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 K7ERJ3 54 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 UQCRQO14949 82 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 NPFFO15130 113 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 OR2H2O95918 312 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 NCR2O95944 276 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 IGKV1D-12P01611 117 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 IGHV3-53P01767 116 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 ATP5G1P05496 136 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 C8orf88P0DMB2 117 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 LINC00694P0DN24 101 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 RPL7P18124 248 aaKnown RBP2.41□□□□□ -2.02
BRCA1-212ENST00000473961 EMP1P54849 157 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 FOXA3P55318 350 aaPredicted RBP2.41□□□□□ -2.02
BRCA1-212ENST00000473961 DAD1P61803 113 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 CST6Q15828 149 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 SPRNQ5BIV9 151 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 PRR9Q5T870 116 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 MIC13Q5XKP0 118 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 AMTNQ6UX39 209 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 OR1L8Q8NGR8 309 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 IFI27L1Q96BM0 104 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 LINC01600Q96MT4 127 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 MGST2Q99735 147 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 OR2H1Q9GZK4 316 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 IMUPQ9GZP8 106 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 ZNF492Q9P255 531 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 ICOSQ9Y6W8 199 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 CACNA1CQ13936 2221 aa2.41□□□□□ -2.02
BRCA1-212ENST00000473961 MPDZO75970 2070 aa2.4□□□□□ -2.02
BRCA1-212ENST00000473961 M0R135 149 aa2.4□□□□□ -2.03
BRCA1-212ENST00000473961 M0R2P5 195 aa2.4□□□□□ -2.03
BRCA1-212ENST00000473961 NPYP01303 97 aa2.4□□□□□ -2.03
BRCA1-212ENST00000473961 HBDP02042 147 aa2.4□□□□□ -2.03
BRCA1-212ENST00000473961 DEFA4P12838 97 aa2.4□□□□□ -2.03
BRCA1-212ENST00000473961 FKBP2P26885 142 aaKnown RBP2.4□□□□□ -2.03
BRCA1-212ENST00000473961 UBE2D3P61077 147 aa2.4□□□□□ -2.03
BRCA1-212ENST00000473961 FGF12P61328 243 aa2.4□□□□□ -2.03
BRCA1-212ENST00000473961 UBE2D2P62837 147 aa2.4□□□□□ -2.03
BRCA1-212ENST00000473961 NNATQ16517 81 aa2.4□□□□□ -2.03
BRCA1-212ENST00000473961 C10orf128Q5T292 105 aa2.4□□□□□ -2.03
BRCA1-212ENST00000473961 MED12LQ86YW9 2145 aa2.4□□□□□ -2.03
BRCA1-212ENST00000473961 LINC00526Q96FQ7 95 aa2.4□□□□□ -2.03
BRCA1-212ENST00000473961 LINC00527Q9UJ94 153 aa2.4□□□□□ -2.03
BRCA1-212ENST00000473961 AMMECR1Q9Y4X0 333 aaPredicted RBP2.4□□□□□ -2.03
BRCA1-212ENST00000473961 COL4A6Q14031 1691 aa2.4□□□□□ -2.03
BRCA1-212ENST00000473961 TRBV7-3A0A075B6L6 115 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 TRAV2A0A0B4J234 112 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 TRBV7-7A0A0K0K1E9 115 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 A0A1B0GUT8 65 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 C19orf71A6NCJ1 209 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 H3BQ85 93 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 LTAP01374 205 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 IGKCP01834 107 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 CLPSP04118 112 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 CRYGDP07320 174 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 LGALS1P09382 135 aaKnown RBP2.39□□□□□ -2.03
BRCA1-212ENST00000473961 IGLC6P0CF74 106 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 CYBAP13498 195 aa2.39□□□□□ -2.03
BRCA1-212ENST00000473961 HSPE1P61604 102 aaKnown RBP2.39□□□□□ -2.03
BRCA1-212ENST00000473961 HERVK_113P63121 156 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms