RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 DUX4L9Q6RFH8 374 aaPredicted RBP7.73□□□□□ -1.17
APTX-216ENST00000472896 RNF125Q96EQ8 232 aa7.73□□□□□ -1.17
APTX-216ENST00000472896 KIR2DL4Q99706 377 aa7.73□□□□□ -1.17
APTX-216ENST00000472896 ASCL2Q99929 193 aa7.73□□□□□ -1.17
APTX-216ENST00000472896 RAB1BQ9H0U4 201 aa7.73□□□□□ -1.17
APTX-216ENST00000472896 H3BVH4 76 aa7.72□□□□□ -1.17
APTX-216ENST00000472896 SPRNQ5BIV9 151 aa7.72□□□□□ -1.17
APTX-216ENST00000472896 SCGB1D4Q6XE38 83 aa7.72□□□□□ -1.17
APTX-216ENST00000472896 C10orf126Q8N4M7 172 aa7.72□□□□□ -1.17
APTX-216ENST00000472896 FAM216BQ8N7L0 139 aa7.72□□□□□ -1.17
APTX-216ENST00000472896 ZNF491Q8N8L2 437 aa7.72□□□□□ -1.17
APTX-216ENST00000472896 NRACQ8N912 160 aa7.72□□□□□ -1.17
APTX-216ENST00000472896 NEXN-AS1Q8NBZ9 246 aa7.72□□□□□ -1.17
APTX-216ENST00000472896 TOMM6Q96B49 74 aa7.72□□□□□ -1.17
APTX-216ENST00000472896 PRADC1Q9BSG0 188 aa7.72□□□□□ -1.17
APTX-216ENST00000472896 ESM1Q9NQ30 184 aa7.72□□□□□ -1.17
APTX-216ENST00000472896 TPSG1Q9NRR2 321 aa7.72□□□□□ -1.17
APTX-216ENST00000472896 HIF1ANQ9NWT6 349 aa7.72□□□□□ -1.17
APTX-216ENST00000472896 DSCAML1Q8TD84 2053 aa7.72□□□□□ -1.17
APTX-216ENST00000472896 IGLV3-9A0A075B6K5 115 aa7.71□□□□□ -1.17
APTX-216ENST00000472896 IGHV3-21A0A0B4J1V1 117 aa7.71□□□□□ -1.17
APTX-216ENST00000472896 B4DSR2 109 aa7.71□□□□□ -1.17
APTX-216ENST00000472896 TEX22C9J3V5 150 aa7.71□□□□□ -1.17
APTX-216ENST00000472896 ORM1P02763 201 aa7.71□□□□□ -1.17
APTX-216ENST00000472896 RPL13AP40429 203 aaKnown RBP7.71□□□□□ -1.17
APTX-216ENST00000472896 HERVK_113P61574 105 aa7.71□□□□□ -1.17
APTX-216ENST00000472896 TNFAIP6P98066 277 aaPredicted RBP7.71□□□□□ -1.17
APTX-216ENST00000472896 FAM201AQ5SY85 155 aa7.71□□□□□ -1.17
APTX-216ENST00000472896 MSRB1Q9NZV6 116 aa7.71□□□□□ -1.17
APTX-216ENST00000472896 TRAV8-4A0A0B4J246 113 aa7.71□□□□□ -1.18
APTX-216ENST00000472896 TRAV4A0A0B4J268 109 aa7.71□□□□□ -1.18
APTX-216ENST00000472896 GAS8-AS1O95177 125 aa7.71□□□□□ -1.18
APTX-216ENST00000472896 P0DMU3 169 aa7.71□□□□□ -1.18
APTX-216ENST00000472896 FAM231AP0DMU4 169 aa7.71□□□□□ -1.18
APTX-216ENST00000472896 FAM231CP0DMU5 169 aa7.71□□□□□ -1.18
APTX-216ENST00000472896 RPL7P18124 248 aaKnown RBP7.71□□□□□ -1.18
APTX-216ENST00000472896 MSMPQ1L6U9 139 aa7.71□□□□□ -1.18
APTX-216ENST00000472896 ZNF575Q86XF7 245 aa7.71□□□□□ -1.18
APTX-216ENST00000472896 SCGB3A1Q96QR1 104 aa7.71□□□□□ -1.18
APTX-216ENST00000472896 PRO1854Q9UHT4 67 aa7.71□□□□□ -1.18
APTX-216ENST00000472896 SIGLEC9Q9Y336 463 aa7.71□□□□□ -1.18
APTX-216ENST00000472896 IGHV4-4A0A075B6R2 117 aa7.7□□□□□ -1.18
APTX-216ENST00000472896 ENSAO43768 121 aaKnown RBP7.7□□□□□ -1.18
APTX-216ENST00000472896 BRI3O95415 125 aa7.7□□□□□ -1.18
APTX-216ENST00000472896 ZNF80P51504 273 aaPredicted RBP7.7□□□□□ -1.18
APTX-216ENST00000472896 ERCC8Q13216 396 aa7.7□□□□□ -1.18
APTX-216ENST00000472896 HIST2H2BDQ6DRA6 164 aa7.7□□□□□ -1.18
APTX-216ENST00000472896 DEFB108BQ8NET1 73 aa7.7□□□□□ -1.18
APTX-216ENST00000472896 ONECUT1Q9UBC0 465 aa7.7□□□□□ -1.18
APTX-216ENST00000472896 TRRAPQ9Y4A5 3859 aa7.7□□□□□ -1.18
APTX-216ENST00000472896 IGKV2-40A0A087WW87 121 aaPredicted RBP7.69□□□□□ -1.18
APTX-216ENST00000472896 IGKV2D-40P01614 121 aaPredicted RBP7.69□□□□□ -1.18
APTX-216ENST00000472896 GATA1P15976 413 aaPredicted RBP7.69□□□□□ -1.18
APTX-216ENST00000472896 MEIG1Q5JSS6 88 aa7.69□□□□□ -1.18
APTX-216ENST00000472896 TMEM200BQ69YZ2 307 aa7.69□□□□□ -1.18
APTX-216ENST00000472896 FAM159AQ6UWV7 190 aa7.69□□□□□ -1.18
APTX-216ENST00000472896 RNF5Q99942 180 aa7.69□□□□□ -1.18
APTX-216ENST00000472896 SMIM2Q9BVW6 85 aa7.69□□□□□ -1.18
APTX-216ENST00000472896 SPANXCQ9NY87 97 aa7.69□□□□□ -1.18
APTX-216ENST00000472896 A0A0J9YY99 117 aa7.69□□□□□ -1.18
APTX-216ENST00000472896 RBAKDNA6NC62 111 aa7.69□□□□□ -1.18
APTX-216ENST00000472896 MSMBP08118 114 aa7.69□□□□□ -1.18
APTX-216ENST00000472896 CFC1BP0CG36 223 aa7.69□□□□□ -1.18
APTX-216ENST00000472896 CFC1P0CG37 223 aa7.69□□□□□ -1.18
APTX-216ENST00000472896 PRTN3P24158 256 aa7.69□□□□□ -1.18
APTX-216ENST00000472896 LMO4P61968 165 aa7.69□□□□□ -1.18
APTX-216ENST00000472896 RASL10AQ92737 203 aa7.69□□□□□ -1.18
APTX-216ENST00000472896 PLEKHB2Q96CS7 222 aa7.69□□□□□ -1.18
APTX-216ENST00000472896 TIMD4Q96H15 378 aa7.69□□□□□ -1.18
APTX-216ENST00000472896 SLC50A1Q9BRV3 221 aa7.69□□□□□ -1.18
APTX-216ENST00000472896 VWFP04275 2813 aa7.68□□□□□ -1.18
APTX-216ENST00000472896 LINC01548A6NM66 108 aa7.68□□□□□ -1.18
APTX-216ENST00000472896 C9JAW5 83 aa7.68□□□□□ -1.18
APTX-216ENST00000472896 K7EIM0 57 aa7.68□□□□□ -1.18
APTX-216ENST00000472896 IGHV1-46P01743 117 aa7.68□□□□□ -1.18
APTX-216ENST00000472896 IGHV3-30P01768 117 aa7.68□□□□□ -1.18
APTX-216ENST00000472896 IGHV3-30-5P0DP03 117 aa7.68□□□□□ -1.18
APTX-216ENST00000472896 CCL3L1P16619 93 aa7.68□□□□□ -1.18
APTX-216ENST00000472896 ATXN8Q156A1 80 aa7.68□□□□□ -1.18
APTX-216ENST00000472896 Q8N1Y9 231 aa7.68□□□□□ -1.18
APTX-216ENST00000472896 VPREB3Q9UKI3 123 aa7.68□□□□□ -1.18
APTX-216ENST00000472896 ZFP36P26651 326 aaKnown RBP7.67□□□□□ -1.18
APTX-216ENST00000472896 SLC25A29Q8N8R3 303 aa7.67□□□□□ -1.18
APTX-216ENST00000472896 C15orf53Q8NAA6 179 aa7.67□□□□□ -1.18
APTX-216ENST00000472896 NUP37Q8NFH4 326 aa7.67□□□□□ -1.18
APTX-216ENST00000472896 BAALCQ8WXS3 180 aa7.67□□□□□ -1.18
APTX-216ENST00000472896 ODF3Q96PU9 254 aa7.67□□□□□ -1.18
APTX-216ENST00000472896 A0A0B4J2C4 111 aa7.66□□□□□ -1.18
APTX-216ENST00000472896 FAM240AA0A1B0GVK7 77 aa7.66□□□□□ -1.18
APTX-216ENST00000472896 SCGB2A1O75556 95 aa7.66□□□□□ -1.18
APTX-216ENST00000472896 DYNLRB1Q9NP97 96 aa7.66□□□□□ -1.18
APTX-216ENST00000472896 TNCP24821 2201 aa7.66□□□□□ -1.18
APTX-216ENST00000472896 ARHGAP32A7KAX9 2087 aa7.66□□□□□ -1.18
APTX-216ENST00000472896 TRAV2A0A0B4J234 112 aa7.66□□□□□ -1.18
APTX-216ENST00000472896 IGHV1-69DA0A0B4J2H0 117 aa7.66□□□□□ -1.18
APTX-216ENST00000472896 TRBV10-2A0A0K0K1G8 114 aa7.66□□□□□ -1.18
APTX-216ENST00000472896 PPP1R17O96001 155 aa7.66□□□□□ -1.18
APTX-216ENST00000472896 ANXA2RQ3ZCQ2 193 aa7.66□□□□□ -1.18
APTX-216ENST00000472896 SFTA2Q6UW10 78 aa7.66□□□□□ -1.18
APTX-216ENST00000472896 NTN5Q8WTR8 489 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms