RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 GAGE12JA6NER3 117 aa11.55□□□□□ -0.56
COMMD3-210ENST00000472610 SNAI2O43623 268 aa11.55□□□□□ -0.56
COMMD3-210ENST00000472610 OR5AL1P0C617 328 aa11.55□□□□□ -0.56
COMMD3-210ENST00000472610 BCL2P10415 239 aa11.55□□□□□ -0.56
COMMD3-210ENST00000472610 GAGE1Q13065 139 aa11.55□□□□□ -0.56
COMMD3-210ENST00000472610 GAGE4Q13068 117 aa11.55□□□□□ -0.56
COMMD3-210ENST00000472610 GAGE5Q13069 117 aa11.55□□□□□ -0.56
COMMD3-210ENST00000472610 GAGE13Q4V321 117 aa11.55□□□□□ -0.56
COMMD3-210ENST00000472610 CENPWQ5EE01 88 aa11.55□□□□□ -0.56
COMMD3-210ENST00000472610 LINC01556Q5JQF7 62 aa11.55□□□□□ -0.56
COMMD3-210ENST00000472610 DAZAP1Q96EP5 407 aaKnown RBP11.55□□□□□ -0.56
COMMD3-210ENST00000472610 SSBP4Q9BWG4 385 aaPredicted RBP11.55□□□□□ -0.56
COMMD3-210ENST00000472610 MED9Q9NWA0 146 aa11.55□□□□□ -0.56
COMMD3-210ENST00000472610 TNFRSF18Q9Y5U5 241 aa11.55□□□□□ -0.56
COMMD3-210ENST00000472610 A0A087WWL8 130 aa11.54□□□□□ -0.56
COMMD3-210ENST00000472610 EREGO14944 169 aa11.54□□□□□ -0.56
COMMD3-210ENST00000472610 LINC00694P0DN24 101 aa11.54□□□□□ -0.56
COMMD3-210ENST00000472610 GNG4P50150 75 aa11.54□□□□□ -0.56
COMMD3-210ENST00000472610 SPATA12Q7Z6I5 190 aa11.54□□□□□ -0.56
COMMD3-210ENST00000472610 C14orf178Q8N769 122 aaPredicted RBP11.54□□□□□ -0.56
COMMD3-210ENST00000472610 BIN3Q9NQY0 253 aa11.54□□□□□ -0.56
COMMD3-210ENST00000472610 A0A087WWC5 75 aa11.53□□□□□ -0.56
COMMD3-210ENST00000472610 ERVFC1-1P60608 527 aa11.53□□□□□ -0.56
COMMD3-210ENST00000472610 BLOC1S1P78537 153 aa11.53□□□□□ -0.56
COMMD3-210ENST00000472610 SPANXN1Q5VSR9 72 aa11.53□□□□□ -0.56
COMMD3-210ENST00000472610 OR10AG1Q8NH19 301 aa11.53□□□□□ -0.56
COMMD3-210ENST00000472610 TRBV10-1A0A0K0K1A3 114 aa11.52□□□□□ -0.57
COMMD3-210ENST00000472610 RAB19A4D1S5 217 aa11.52□□□□□ -0.57
COMMD3-210ENST00000472610 IGLV2-8P01709 118 aa11.52□□□□□ -0.57
COMMD3-210ENST00000472610 RPS20P60866 119 aaKnown RBP11.52□□□□□ -0.57
COMMD3-210ENST00000472610 IBA57-AS1B1ANH7 110 aa11.51□□□□□ -0.57
COMMD3-210ENST00000472610 RAB4BP61018 213 aa11.51□□□□□ -0.57
COMMD3-210ENST00000472610 Q9UF83 564 aa11.51□□□□□ -0.57
COMMD3-210ENST00000472610 PKHD1P08F94 4074 aa11.51□□□□□ -0.57
COMMD3-210ENST00000472610 XKRY2A2RUG3 117 aa11.5□□□□□ -0.57
COMMD3-210ENST00000472610 C19orf71A6NCJ1 209 aa11.5□□□□□ -0.57
COMMD3-210ENST00000472610 RPL36AP83881 106 aaKnown RBP11.5□□□□□ -0.57
COMMD3-210ENST00000472610 ALKAL2Q6UX46 152 aa11.5□□□□□ -0.57
COMMD3-210ENST00000472610 RPL36ALQ969Q0 106 aaKnown RBP11.5□□□□□ -0.57
COMMD3-210ENST00000472610 PGPEP1Q9NXJ5 209 aa11.5□□□□□ -0.57
COMMD3-210ENST00000472610 OR2D3Q8NGH3 330 aa11.49□□□□□ -0.57
COMMD3-210ENST00000472610 TRBV20OR9-2A0A075B6H5 130 aa11.48□□□□□ -0.57
COMMD3-210ENST00000472610 TRBV7-3A0A075B6L6 115 aa11.48□□□□□ -0.57
COMMD3-210ENST00000472610 P01737 135 aa11.48□□□□□ -0.57
COMMD3-210ENST00000472610 IGHV3-30P01768 117 aa11.48□□□□□ -0.57
COMMD3-210ENST00000472610 IGHV3-33P01772 117 aa11.48□□□□□ -0.57
COMMD3-210ENST00000472610 IGHV3-30-3P0DP02 117 aa11.48□□□□□ -0.57
COMMD3-210ENST00000472610 IGHV3-30-5P0DP03 117 aa11.48□□□□□ -0.57
COMMD3-210ENST00000472610 KRTAP10-2P60368 255 aa11.48□□□□□ -0.57
COMMD3-210ENST00000472610 ZNF56Q15929 161 aa11.48□□□□□ -0.57
COMMD3-210ENST00000472610 FER1L6-AS1Q8NA97 138 aa11.48□□□□□ -0.57
COMMD3-210ENST00000472610 DNAH11Q96DT5 4516 aa11.48□□□□□ -0.57
COMMD3-210ENST00000472610 A0A087WTM6 91 aa11.47□□□□□ -0.57
COMMD3-210ENST00000472610 MUC21A0A0G2JKD1 596 aa11.47□□□□□ -0.57
COMMD3-210ENST00000472610 MUC21A0A140T8X8 626 aa11.47□□□□□ -0.57
COMMD3-210ENST00000472610 CDK2AP2O75956 126 aa11.47□□□□□ -0.57
COMMD3-210ENST00000472610 IGLC6P0CF74 106 aa11.47□□□□□ -0.57
COMMD3-210ENST00000472610 SMIM17P0DL12 118 aa11.47□□□□□ -0.57
COMMD3-210ENST00000472610 LAGE3Q14657 143 aa11.47□□□□□ -0.57
COMMD3-210ENST00000472610 OR10G8Q8NGN5 311 aa11.47□□□□□ -0.57
COMMD3-210ENST00000472610 LYPD6BQ8NI32 183 aa11.47□□□□□ -0.57
COMMD3-210ENST00000472610 AP1S3Q96PC3 154 aa11.47□□□□□ -0.57
COMMD3-210ENST00000472610 DYNC1H1Q14204 4646 aaKnown RBP11.46□□□□□ -0.57
COMMD3-210ENST00000472610 HERC2O95714 4834 aa11.46□□□□□ -0.57
COMMD3-210ENST00000472610 RBFOX3A6NFN3 312 aa11.46□□□□□ -0.57
COMMD3-210ENST00000472610 F2Z2F3 143 aa11.46□□□□□ -0.57
COMMD3-210ENST00000472610 PSCAO43653 123 aa11.46□□□□□ -0.57
COMMD3-210ENST00000472610 UBE2D3P61077 147 aa11.46□□□□□ -0.57
COMMD3-210ENST00000472610 UBE2D2P62837 147 aa11.46□□□□□ -0.57
COMMD3-210ENST00000472610 CACNG7P62955 275 aa11.46□□□□□ -0.57
COMMD3-210ENST00000472610 CDPF1Q6NVV7 123 aa11.46□□□□□ -0.57
COMMD3-210ENST00000472610 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.46□□□□□ -0.57
COMMD3-210ENST00000472610 KIAA1109Q2LD37 5005 aa11.46□□□□□ -0.58
COMMD3-210ENST00000472610 F5H697 171 aa11.45□□□□□ -0.58
COMMD3-210ENST00000472610 TMEM250H0YL14 139 aa11.45□□□□□ -0.58
COMMD3-210ENST00000472610 GZMBP10144 247 aa11.45□□□□□ -0.58
COMMD3-210ENST00000472610 SSTP61278 116 aa11.45□□□□□ -0.58
COMMD3-210ENST00000472610 TOR2AQ5JU69 321 aa11.45□□□□□ -0.58
COMMD3-210ENST00000472610 TPPP3Q9BW30 176 aa11.45□□□□□ -0.58
COMMD3-210ENST00000472610 URGCP-MRPS24S4R325 110 aa11.45□□□□□ -0.58
COMMD3-210ENST00000472610 A0A1B0GVG6 124 aa11.44□□□□□ -0.58
COMMD3-210ENST00000472610 NUDT10Q8NFP7 164 aa11.44□□□□□ -0.58
COMMD3-210ENST00000472610 NUDT11Q96G61 164 aa11.44□□□□□ -0.58
COMMD3-210ENST00000472610 TM2D2Q9BX73 214 aa11.44□□□□□ -0.58
COMMD3-210ENST00000472610 Q9HAA7 133 aa11.44□□□□□ -0.58
COMMD3-210ENST00000472610 KIF25-AS1Q9Y6Z4 181 aa11.44□□□□□ -0.58
COMMD3-210ENST00000472610 TRAV8-3A0A0A6YYJ7 113 aa11.43□□□□□ -0.58
COMMD3-210ENST00000472610 NKX2-5P52952 324 aaPredicted RBP11.43□□□□□ -0.58
COMMD3-210ENST00000472610 NEXN-AS1Q8NBZ9 246 aa11.43□□□□□ -0.58
COMMD3-210ENST00000472610 OCC1Q8TAD7 63 aa11.43□□□□□ -0.58
COMMD3-210ENST00000472610 NDUFS6O75380 124 aaKnown RBP11.42□□□□□ -0.58
COMMD3-210ENST00000472610 WDR73Q6P4I2 378 aa11.42□□□□□ -0.58
COMMD3-210ENST00000472610 NIT1Q86X76 327 aa11.42□□□□□ -0.58
COMMD3-210ENST00000472610 CHCHD7Q9BUK0 85 aa11.42□□□□□ -0.58
COMMD3-210ENST00000472610 TRGC1P0CF51 173 aa11.41□□□□□ -0.58
COMMD3-210ENST00000472610 TMEM97Q5BJF2 176 aa11.41□□□□□ -0.58
COMMD3-210ENST00000472610 KCNIP4Q6PIL6 250 aa11.41□□□□□ -0.58
COMMD3-210ENST00000472610 LYZL1Q6UWQ5 148 aa11.41□□□□□ -0.58
COMMD3-210ENST00000472610 DAZ4Q86SG3 579 aaKnown RBP11.41□□□□□ -0.58
COMMD3-210ENST00000472610 DAZ3Q9NR90 486 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms