RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ARL14EPLP0DKL9 152 aa5.94□□□□□ -1.46
VCL-204ENST00000472585 FLI1Q01543 452 aaPredicted RBP5.94□□□□□ -1.46
VCL-204ENST00000472585 FAM74A1Q5RGS3 127 aa5.94□□□□□ -1.46
VCL-204ENST00000472585 PQLC2Q6ZP29 291 aa5.94□□□□□ -1.46
VCL-204ENST00000472585 PRNTQ86SH4 94 aa5.94□□□□□ -1.46
VCL-204ENST00000472585 C9orf163Q8N9P6 203 aa5.94□□□□□ -1.46
VCL-204ENST00000472585 PPP1R1CQ8WVI7 109 aa5.94□□□□□ -1.46
VCL-204ENST00000472585 EPDR1Q9UM22 224 aa5.94□□□□□ -1.46
VCL-204ENST00000472585 A0A087WWL8 130 aa5.93□□□□□ -1.46
VCL-204ENST00000472585 TRAV34A0A0B4J273 112 aa5.93□□□□□ -1.46
VCL-204ENST00000472585 FAM240BA0A1B0GVZ2 78 aa5.93□□□□□ -1.46
VCL-204ENST00000472585 USP17L23D6RBM5 183 aa5.93□□□□□ -1.46
VCL-204ENST00000472585 FGF8P55075 233 aaPredicted RBP5.93□□□□□ -1.46
VCL-204ENST00000472585 SUMO1P63165 101 aaKnown RBP5.93□□□□□ -1.46
VCL-204ENST00000472585 SMUG1Q53HV7 270 aa5.93□□□□□ -1.46
VCL-204ENST00000472585 PIK3CD-AS1Q5SR53 167 aa5.93□□□□□ -1.46
VCL-204ENST00000472585 C5orf17Q8NAS9 161 aa5.93□□□□□ -1.46
VCL-204ENST00000472585 OR10G7Q8NGN6 311 aa5.93□□□□□ -1.46
VCL-204ENST00000472585 GRIFINA4D1Z8 144 aa5.92□□□□□ -1.46
VCL-204ENST00000472585 MPC2O95563 127 aa5.92□□□□□ -1.46
VCL-204ENST00000472585 SLPIP03973 132 aa5.92□□□□□ -1.46
VCL-204ENST00000472585 ARMS2P0C7Q2 107 aa5.92□□□□□ -1.46
VCL-204ENST00000472585 STAG3L2P0CL84 134 aa5.92□□□□□ -1.46
VCL-204ENST00000472585 STAG3L3P0CL85 134 aa5.92□□□□□ -1.46
VCL-204ENST00000472585 RPL12P30050 165 aaKnown RBP5.92□□□□□ -1.46
VCL-204ENST00000472585 UBE2D3P61077 147 aa5.92□□□□□ -1.46
VCL-204ENST00000472585 UBE2D2P62837 147 aa5.92□□□□□ -1.46
VCL-204ENST00000472585 MPV17L2Q567V2 206 aa5.92□□□□□ -1.46
VCL-204ENST00000472585 OR10G9Q8NGN4 311 aa5.92□□□□□ -1.46
VCL-204ENST00000472585 OR2G3Q8NGZ4 309 aa5.92□□□□□ -1.46
VCL-204ENST00000472585 SCGB1C1Q8TD33 95 aa5.92□□□□□ -1.46
VCL-204ENST00000472585 RAB24Q969Q5 203 aa5.92□□□□□ -1.46
VCL-204ENST00000472585 DPH3Q96FX2 82 aa5.92□□□□□ -1.46
VCL-204ENST00000472585 ZC2HC1AQ96GY0 325 aa5.92□□□□□ -1.46
VCL-204ENST00000472585 NDFIP1Q9BT67 221 aa5.92□□□□□ -1.46
VCL-204ENST00000472585 IL36BQ9NZH7 164 aa5.92□□□□□ -1.46
VCL-204ENST00000472585 A0A087WX48 190 aa5.91□□□□□ -1.46
VCL-204ENST00000472585 SERTM2A0A1B0GWG4 89 aa5.91□□□□□ -1.46
VCL-204ENST00000472585 A0A1W2PPV4 95 aa5.91□□□□□ -1.46
VCL-204ENST00000472585 KRBOX1C9JBD0 128 aa5.91□□□□□ -1.46
VCL-204ENST00000472585 H3BVH4 76 aa5.91□□□□□ -1.46
VCL-204ENST00000472585 GCHFRP30047 84 aa5.91□□□□□ -1.46
VCL-204ENST00000472585 IFITM3Q01628 133 aa5.91□□□□□ -1.46
VCL-204ENST00000472585 Q0VG73 95 aa5.91□□□□□ -1.46
VCL-204ENST00000472585 CIRBPQ14011 172 aaKnown RBP5.91□□□□□ -1.46
VCL-204ENST00000472585 DNLZQ5SXM8 178 aa5.91□□□□□ -1.46
VCL-204ENST00000472585 FAM74A4Q5TZK3 123 aa5.91□□□□□ -1.46
VCL-204ENST00000472585 KCNIP4Q6PIL6 250 aa5.91□□□□□ -1.46
VCL-204ENST00000472585 C15orf54Q8N8G6 183 aa5.91□□□□□ -1.46
VCL-204ENST00000472585 SFRP2Q96HF1 295 aa5.91□□□□□ -1.46
VCL-204ENST00000472585 LINC01600Q96MT4 127 aa5.91□□□□□ -1.46
VCL-204ENST00000472585 CHCHD7Q9BUK0 85 aa5.91□□□□□ -1.46
VCL-204ENST00000472585 TRBV6-8A0A0A6YYG3 113 aa5.9□□□□□ -1.46
VCL-204ENST00000472585 KRTAP4-8A0A0G2JLE6 195 aa5.9□□□□□ -1.46
VCL-204ENST00000472585 FABP5P3A8MUU1 101 aa5.9□□□□□ -1.46
VCL-204ENST00000472585 TMEM262E9PQX1 116 aa5.9□□□□□ -1.46
VCL-204ENST00000472585 S100A4P26447 101 aaKnown RBP5.9□□□□□ -1.46
VCL-204ENST00000472585 CYCSP99999 105 aaKnown RBP5.9□□□□□ -1.46
VCL-204ENST00000472585 ELOBQ15370 118 aa5.9□□□□□ -1.46
VCL-204ENST00000472585 DGAT2L7PQ6IED9 249 aa5.9□□□□□ -1.46
VCL-204ENST00000472585 NTM-AS1Q6ZSK4 140 aa5.9□□□□□ -1.46
VCL-204ENST00000472585 CCDC32Q9BV29 185 aa5.9□□□□□ -1.46
VCL-204ENST00000472585 C1orf43Q9BWL3 253 aa5.9□□□□□ -1.46
VCL-204ENST00000472585 NDUFA13Q9P0J0 144 aa5.9□□□□□ -1.46
VCL-204ENST00000472585 ARL2-SNX15V9GYD0 113 aa5.9□□□□□ -1.46
VCL-204ENST00000472585 B4DEV8 164 aa5.89□□□□□ -1.47
VCL-204ENST00000472585 M0R036 132 aa5.89□□□□□ -1.47
VCL-204ENST00000472585 HLA-DQA1P01909 254 aa5.89□□□□□ -1.47
VCL-204ENST00000472585 CHTF8P0CG12 524 aa5.89□□□□□ -1.47
VCL-204ENST00000472585 CDC34P49427 236 aaPredicted RBP5.89□□□□□ -1.47
VCL-204ENST00000472585 SAPCD1Q5SSQ6 148 aa5.89□□□□□ -1.47
VCL-204ENST00000472585 NEXN-AS1Q8NBZ9 246 aa5.89□□□□□ -1.47
VCL-204ENST00000472585 TRBV7-3A0A075B6L6 115 aa5.88□□□□□ -1.47
VCL-204ENST00000472585 A0A087WYN8 130 aa5.88□□□□□ -1.47
VCL-204ENST00000472585 A0A0U1RQV1 116 aa5.88□□□□□ -1.47
VCL-204ENST00000472585 RHODO00212 210 aa5.88□□□□□ -1.47
VCL-204ENST00000472585 ANGP03950 147 aaKnown RBP5.88□□□□□ -1.47
VCL-204ENST00000472585 OR10G8Q8NGN5 311 aa5.88□□□□□ -1.47
VCL-204ENST00000472585 PRR34Q9NV39 138 aa5.88□□□□□ -1.47
VCL-204ENST00000472585 LPAP08519 4548 aa5.87□□□□□ -1.47
VCL-204ENST00000472585 TMSB15BA0A087X1C1 80 aa5.87□□□□□ -1.47
VCL-204ENST00000472585 TRBV10-1A0A0K0K1A3 114 aa5.87□□□□□ -1.47
VCL-204ENST00000472585 INMT-MINDY4F8WBC2 141 aa5.87□□□□□ -1.47
VCL-204ENST00000472585 K7EQM0 130 aa5.87□□□□□ -1.47
VCL-204ENST00000472585 M0R381 172 aa5.87□□□□□ -1.47
VCL-204ENST00000472585 SH2D1AO60880 128 aa5.87□□□□□ -1.47
VCL-204ENST00000472585 ATP6V0CP27449 155 aa5.87□□□□□ -1.47
VCL-204ENST00000472585 ZNF726P1Q15940 193 aa5.87□□□□□ -1.47
VCL-204ENST00000472585 ZFP69Q49AA0 526 aa5.87□□□□□ -1.47
VCL-204ENST00000472585 PRR27Q6MZM9 219 aa5.87□□□□□ -1.47
VCL-204ENST00000472585 MZT2BQ6NZ67 158 aa5.87□□□□□ -1.47
VCL-204ENST00000472585 CLPSL2Q6UWE3 100 aa5.87□□□□□ -1.47
VCL-204ENST00000472585 COX8CQ7Z4L0 72 aa5.87□□□□□ -1.47
VCL-204ENST00000472585 OR11H4Q8NGC9 324 aa5.87□□□□□ -1.47
VCL-204ENST00000472585 C7orf33Q8WU49 177 aa5.87□□□□□ -1.47
VCL-204ENST00000472585 A0A0J9YXV3 536 aa5.86□□□□□ -1.47
VCL-204ENST00000472585 A0A1W2PRE2 83 aa5.86□□□□□ -1.47
VCL-204ENST00000472585 PTTG1O95997 202 aa5.86□□□□□ -1.47
VCL-204ENST00000472585 CRPP02741 224 aa5.86□□□□□ -1.47
VCL-204ENST00000472585 KRTAP10-8P60410 259 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms