RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 RHODO00212 210 aa12.02□□□□□ -0.49
SORT1-203ENST00000471996 S100A4P26447 101 aaKnown RBP12.02□□□□□ -0.49
SORT1-203ENST00000471996 KRTAP10-8P60410 259 aa12.02□□□□□ -0.49
SORT1-203ENST00000471996 MIAQ16674 131 aa12.02□□□□□ -0.49
SORT1-203ENST00000471996 SERTM2A0A1B0GWG4 89 aa12.01□□□□□ -0.49
SORT1-203ENST00000471996 PHOX2AO14813 284 aa12.01□□□□□ -0.49
SORT1-203ENST00000471996 ANGP03950 147 aaKnown RBP12.01□□□□□ -0.49
SORT1-203ENST00000471996 SMUG1Q53HV7 270 aa12.01□□□□□ -0.49
SORT1-203ENST00000471996 MPV17L2Q567V2 206 aa12.01□□□□□ -0.49
SORT1-203ENST00000471996 HSPB11Q9Y547 144 aa12.01□□□□□ -0.49
SORT1-203ENST00000471996 IGKV3D-20A0A0C4DH25 116 aa12□□□□□ -0.49
SORT1-203ENST00000471996 PTTG1O95997 202 aa12□□□□□ -0.49
SORT1-203ENST00000471996 RPL12P30050 165 aaKnown RBP12□□□□□ -0.49
SORT1-203ENST00000471996 CNBPP62633 177 aaKnown RBP12□□□□□ -0.49
SORT1-203ENST00000471996 CLRN3Q8NCR9 226 aa12□□□□□ -0.49
SORT1-203ENST00000471996 PSG8Q9UQ74 426 aa12□□□□□ -0.49
SORT1-203ENST00000471996 UBE2D3P61077 147 aa11.99□□□□□ -0.49
SORT1-203ENST00000471996 UBE2D2P62837 147 aa11.99□□□□□ -0.49
SORT1-203ENST00000471996 ZFP69Q49AA0 526 aa11.99□□□□□ -0.49
SORT1-203ENST00000471996 WDR73Q6P4I2 378 aa11.99□□□□□ -0.49
SORT1-203ENST00000471996 KRTAP26-1Q6PEX3 210 aa11.99□□□□□ -0.49
SORT1-203ENST00000471996 PQLC2Q6ZP29 291 aa11.99□□□□□ -0.49
SORT1-203ENST00000471996 C7orf33Q8WU49 177 aa11.99□□□□□ -0.49
SORT1-203ENST00000471996 KIF25-AS1Q9Y6Z4 181 aa11.99□□□□□ -0.49
SORT1-203ENST00000471996 TRBV6-8A0A0A6YYG3 113 aa11.98□□□□□ -0.49
SORT1-203ENST00000471996 TRBV10-1A0A0K0K1A3 114 aa11.98□□□□□ -0.49
SORT1-203ENST00000471996 TCRAP04437 139 aa11.98□□□□□ -0.49
SORT1-203ENST00000471996 CHTF8P0CG12 524 aa11.98□□□□□ -0.49
SORT1-203ENST00000471996 RPL36AP83881 106 aaKnown RBP11.98□□□□□ -0.49
SORT1-203ENST00000471996 FAM74A4Q5TZK3 123 aa11.98□□□□□ -0.49
SORT1-203ENST00000471996 SCGB1C1Q8TD33 95 aa11.98□□□□□ -0.49
SORT1-203ENST00000471996 SPACA4Q8TDM5 124 aa11.98□□□□□ -0.49
SORT1-203ENST00000471996 RPL36ALQ969Q0 106 aaKnown RBP11.98□□□□□ -0.49
SORT1-203ENST00000471996 PLAC8Q9NZF1 115 aa11.98□□□□□ -0.49
SORT1-203ENST00000471996 IL36BQ9NZH7 164 aa11.98□□□□□ -0.49
SORT1-203ENST00000471996 IGHV3-64A0A075B6Q5 118 aa11.97□□□□□ -0.49
SORT1-203ENST00000471996 TRBV7-3A0A075B6L6 115 aa11.96□□□□□ -0.49
SORT1-203ENST00000471996 K7EQM0 130 aa11.96□□□□□ -0.49
SORT1-203ENST00000471996 FLI1Q01543 452 aaPredicted RBP11.96□□□□□ -0.49
SORT1-203ENST00000471996 PRNTQ86SH4 94 aa11.96□□□□□ -0.49
SORT1-203ENST00000471996 C5orf17Q8NAS9 161 aa11.96□□□□□ -0.49
SORT1-203ENST00000471996 PRR34Q9NV39 138 aa11.96□□□□□ -0.49
SORT1-203ENST00000471996 ALG5Q9Y673 324 aa11.96□□□□□ -0.49
SORT1-203ENST00000471996 A0A087WWL8 130 aa11.95□□□□□ -0.5
SORT1-203ENST00000471996 H3BVH4 76 aa11.94□□□□□ -0.5
SORT1-203ENST00000471996 PKIAP61925 76 aa11.94□□□□□ -0.5
SORT1-203ENST00000471996 PRR3P79522 188 aaKnown RBP11.94□□□□□ -0.5
SORT1-203ENST00000471996 SAPCD1Q5SSQ6 148 aa11.94□□□□□ -0.5
SORT1-203ENST00000471996 SFRP2Q96HF1 295 aa11.94□□□□□ -0.5
SORT1-203ENST00000471996 A0A1W2PPV4 95 aa11.93□□□□□ -0.5
SORT1-203ENST00000471996 hDV102S1A0JD36 115 aa11.93□□□□□ -0.5
SORT1-203ENST00000471996 OR11H4Q8NGC9 324 aa11.93□□□□□ -0.5
SORT1-203ENST00000471996 OR10G8Q8NGN5 311 aa11.93□□□□□ -0.5
SORT1-203ENST00000471996 CHCHD5Q9BSY4 110 aa11.93□□□□□ -0.5
SORT1-203ENST00000471996 MED28Q9H204 178 aa11.93□□□□□ -0.5
SORT1-203ENST00000471996 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.92□□□□□ -0.5
SORT1-203ENST00000471996 FABP5P3A8MUU1 101 aa11.92□□□□□ -0.5
SORT1-203ENST00000471996 HMGB3O15347 200 aaKnown RBP11.92□□□□□ -0.5
SORT1-203ENST00000471996 SLPIP03973 132 aa11.92□□□□□ -0.5
SORT1-203ENST00000471996 ARMS2P0C7Q2 107 aa11.92□□□□□ -0.5
SORT1-203ENST00000471996 REG3GQ6UW15 175 aa11.92□□□□□ -0.5
SORT1-203ENST00000471996 CLPSL2Q6UWE3 100 aa11.92□□□□□ -0.5
SORT1-203ENST00000471996 SMIM3Q9BZL3 60 aa11.92□□□□□ -0.5
SORT1-203ENST00000471996 DNLZQ5SXM8 178 aa11.91□□□□□ -0.5
SORT1-203ENST00000471996 LINC00269Q8N2A0 174 aa11.91□□□□□ -0.5
SORT1-203ENST00000471996 GTSF1Q8WW33 167 aa11.91□□□□□ -0.5
SORT1-203ENST00000471996 AP5S1Q9NUS5 200 aa11.91□□□□□ -0.5
SORT1-203ENST00000471996 MUC2Q02817 5179 aa11.91□□□□□ -0.5
SORT1-203ENST00000471996 B4DEV8 164 aa11.9□□□□□ -0.5
SORT1-203ENST00000471996 SPINK6Q6UWN8 80 aa11.9□□□□□ -0.5
SORT1-203ENST00000471996 WFDC1Q9HC57 220 aa11.9□□□□□ -0.5
SORT1-203ENST00000471996 EPDR1Q9UM22 224 aa11.9□□□□□ -0.5
SORT1-203ENST00000471996 ARL14EPLP0DKL9 152 aa11.89□□□□□ -0.51
SORT1-203ENST00000471996 RAB2AP61019 212 aa11.89□□□□□ -0.51
SORT1-203ENST00000471996 AQP10Q96PS8 301 aa11.89□□□□□ -0.51
SORT1-203ENST00000471996 GIPP09681 153 aaPredicted RBP11.88□□□□□ -0.51
SORT1-203ENST00000471996 RBX1P62877 108 aa11.88□□□□□ -0.51
SORT1-203ENST00000471996 SUMO1P63165 101 aaKnown RBP11.88□□□□□ -0.51
SORT1-203ENST00000471996 SUN5Q8TC36 379 aa11.88□□□□□ -0.51
SORT1-203ENST00000471996 PHLDA3Q9Y5J5 127 aa11.88□□□□□ -0.51
SORT1-203ENST00000471996 KRBOX1C9JBD0 128 aa11.87□□□□□ -0.51
SORT1-203ENST00000471996 M0R381 172 aa11.87□□□□□ -0.51
SORT1-203ENST00000471996 NEXN-AS1Q8NBZ9 246 aa11.87□□□□□ -0.51
SORT1-203ENST00000471996 PSMG3Q9BT73 122 aaPredicted RBP11.87□□□□□ -0.51
SORT1-203ENST00000471996 IGLV10-54A0A075B6I4 117 aa11.86□□□□□ -0.51
SORT1-203ENST00000471996 GRIFINA4D1Z8 144 aa11.86□□□□□ -0.51
SORT1-203ENST00000471996 MBP02144 154 aa11.86□□□□□ -0.51
SORT1-203ENST00000471996 SERF2P84101 59 aa11.86□□□□□ -0.51
SORT1-203ENST00000471996 ARL2-SNX15V9GYD0 113 aa11.86□□□□□ -0.51
SORT1-203ENST00000471996 KRTAP9-6A0A140TA67 174 aa11.85□□□□□ -0.51
SORT1-203ENST00000471996 STAG3L2P0CL84 134 aa11.85□□□□□ -0.51
SORT1-203ENST00000471996 STAG3L3P0CL85 134 aa11.85□□□□□ -0.51
SORT1-203ENST00000471996 TPT1P13693 172 aaKnown RBP11.85□□□□□ -0.51
SORT1-203ENST00000471996 NTM-AS1Q6ZSK4 140 aa11.85□□□□□ -0.51
SORT1-203ENST00000471996 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.85□□□□□ -0.51
SORT1-203ENST00000471996 INO80EQ8NBZ0 244 aaPredicted RBP11.85□□□□□ -0.51
SORT1-203ENST00000471996 TRAV34A0A0B4J273 112 aa11.84□□□□□ -0.51
SORT1-203ENST00000471996 M0R036 132 aa11.84□□□□□ -0.51
SORT1-203ENST00000471996 RAB4BP61018 213 aa11.84□□□□□ -0.51
SORT1-203ENST00000471996 COX6A2Q02221 97 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms