RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 SMIM3Q9BZL3 60 aa5.98□□□□□ -1.45
CPSF4-211ENST00000471455 NDUFA13Q9P0J0 144 aa5.98□□□□□ -1.45
CPSF4-211ENST00000471455 MPC2O95563 127 aa5.97□□□□□ -1.45
CPSF4-211ENST00000471455 IGLV2-11P01706 119 aa5.97□□□□□ -1.45
CPSF4-211ENST00000471455 ARL14EPLP0DKL9 152 aa5.97□□□□□ -1.45
CPSF4-211ENST00000471455 RNASE3P12724 160 aaKnown RBP5.97□□□□□ -1.45
CPSF4-211ENST00000471455 ZNF80P51504 273 aaPredicted RBP5.97□□□□□ -1.45
CPSF4-211ENST00000471455 RAB2AP61019 212 aa5.97□□□□□ -1.45
CPSF4-211ENST00000471455 LINC01620Q4KN68 170 aa5.97□□□□□ -1.45
CPSF4-211ENST00000471455 LINC00299Q6ZSB3 139 aa5.97□□□□□ -1.45
CPSF4-211ENST00000471455 PRNTQ86SH4 94 aa5.97□□□□□ -1.45
CPSF4-211ENST00000471455 NIT1Q86X76 327 aa5.97□□□□□ -1.45
CPSF4-211ENST00000471455 TMEM75Q8N9X5 138 aa5.97□□□□□ -1.45
CPSF4-211ENST00000471455 OR2T35Q8NGX2 323 aa5.97□□□□□ -1.45
CPSF4-211ENST00000471455 CIRBP-AS1Q8TBR5 109 aa5.97□□□□□ -1.45
CPSF4-211ENST00000471455 S100ZQ8WXG8 99 aa5.97□□□□□ -1.45
CPSF4-211ENST00000471455 UBE2WQ96B02 151 aa5.97□□□□□ -1.45
CPSF4-211ENST00000471455 SGK494Q96LW2 274 aa5.97□□□□□ -1.45
CPSF4-211ENST00000471455 C1orf43Q9BWL3 253 aa5.97□□□□□ -1.45
CPSF4-211ENST00000471455 TMEM167BQ9NRX6 74 aa5.97□□□□□ -1.45
CPSF4-211ENST00000471455 C11orf21Q9P2W6 132 aa5.97□□□□□ -1.45
CPSF4-211ENST00000471455 KLK12Q9UKR0 248 aa5.97□□□□□ -1.45
CPSF4-211ENST00000471455 HMGB3O15347 200 aaKnown RBP5.96□□□□□ -1.46
CPSF4-211ENST00000471455 SSNA1O43805 119 aa5.96□□□□□ -1.46
CPSF4-211ENST00000471455 EIF3GO75821 320 aaKnown RBP eCLIP5.96□□□□□ -1.46
CPSF4-211ENST00000471455 MBP02144 154 aa5.96□□□□□ -1.46
CPSF4-211ENST00000471455 CRPP02741 224 aa5.96□□□□□ -1.46
CPSF4-211ENST00000471455 STAG3L2P0CL84 134 aa5.96□□□□□ -1.46
CPSF4-211ENST00000471455 STAG3L3P0CL85 134 aa5.96□□□□□ -1.46
CPSF4-211ENST00000471455 RPL37AP61513 92 aaKnown RBP5.96□□□□□ -1.46
CPSF4-211ENST00000471455 PKIAP61925 76 aa5.96□□□□□ -1.46
CPSF4-211ENST00000471455 OR11H4Q8NGC9 324 aa5.96□□□□□ -1.46
CPSF4-211ENST00000471455 LINC00479Q96M42 142 aa5.96□□□□□ -1.46
CPSF4-211ENST00000471455 IL36BQ9NZH7 164 aa5.96□□□□□ -1.46
CPSF4-211ENST00000471455 EPDR1Q9UM22 224 aa5.96□□□□□ -1.46
CPSF4-211ENST00000471455 TRBV10-1A0A0K0K1A3 114 aa5.95□□□□□ -1.46
CPSF4-211ENST00000471455 FABP5P3A8MUU1 101 aa5.95□□□□□ -1.46
CPSF4-211ENST00000471455 INMT-MINDY4F8WBC2 141 aa5.95□□□□□ -1.46
CPSF4-211ENST00000471455 GCHFRP30047 84 aa5.95□□□□□ -1.46
CPSF4-211ENST00000471455 H2BFSP57053 126 aa5.95□□□□□ -1.46
CPSF4-211ENST00000471455 RPL36AP83881 106 aaKnown RBP5.95□□□□□ -1.46
CPSF4-211ENST00000471455 ATRAIDQ6UW56 229 aa5.95□□□□□ -1.46
CPSF4-211ENST00000471455 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.95□□□□□ -1.46
CPSF4-211ENST00000471455 CLRN3Q8NCR9 226 aa5.95□□□□□ -1.46
CPSF4-211ENST00000471455 OR2G3Q8NGZ4 309 aa5.95□□□□□ -1.46
CPSF4-211ENST00000471455 RPL36ALQ969Q0 106 aaKnown RBP5.95□□□□□ -1.46
CPSF4-211ENST00000471455 B4DEV8 164 aa5.94□□□□□ -1.46
CPSF4-211ENST00000471455 H3BVH4 76 aa5.94□□□□□ -1.46
CPSF4-211ENST00000471455 CXorf1O96002 111 aa5.94□□□□□ -1.46
CPSF4-211ENST00000471455 KRTAP10-4P60372 401 aaPredicted RBP5.94□□□□□ -1.46
CPSF4-211ENST00000471455 FAM74A4Q5TZK3 123 aa5.94□□□□□ -1.46
CPSF4-211ENST00000471455 UFSP1Q6NVU6 142 aa5.94□□□□□ -1.46
CPSF4-211ENST00000471455 C14orf178Q8N769 122 aaPredicted RBP5.94□□□□□ -1.46
CPSF4-211ENST00000471455 SUN5Q8TC36 379 aa5.94□□□□□ -1.46
CPSF4-211ENST00000471455 RAB24Q969Q5 203 aa5.94□□□□□ -1.46
CPSF4-211ENST00000471455 PSMG3Q9BT73 122 aaPredicted RBP5.94□□□□□ -1.46
CPSF4-211ENST00000471455 SAMD10Q9BYL1 202 aa5.94□□□□□ -1.46
CPSF4-211ENST00000471455 UBR4Q5T4S7 5183 aa5.94□□□□□ -1.46
CPSF4-211ENST00000471455 LRP1Q07954 4544 aaKnown RBP5.93□□□□□ -1.46
CPSF4-211ENST00000471455 IGKV3D-20A0A0C4DH25 116 aa5.93□□□□□ -1.46
CPSF4-211ENST00000471455 A0A1W2PRE2 83 aa5.93□□□□□ -1.46
CPSF4-211ENST00000471455 TMEM262E9PQX1 116 aa5.93□□□□□ -1.46
CPSF4-211ENST00000471455 IFNA7P01567 189 aa5.93□□□□□ -1.46
CPSF4-211ENST00000471455 TPT1P13693 172 aaKnown RBP5.93□□□□□ -1.46
CPSF4-211ENST00000471455 PTTG1IPP53801 180 aa5.93□□□□□ -1.46
CPSF4-211ENST00000471455 SERF2P84101 59 aa5.93□□□□□ -1.46
CPSF4-211ENST00000471455 ACTR3CQ9C0K3 210 aaPredicted RBP5.93□□□□□ -1.46
CPSF4-211ENST00000471455 PHLDA3Q9Y5J5 127 aa5.93□□□□□ -1.46
CPSF4-211ENST00000471455 ARL2-SNX15V9GYD0 113 aa5.93□□□□□ -1.46
CPSF4-211ENST00000471455 TRBV7-3A0A075B6L6 115 aa5.92□□□□□ -1.46
CPSF4-211ENST00000471455 UPK1BO75841 260 aa5.92□□□□□ -1.46
CPSF4-211ENST00000471455 DEFA1P59665 94 aa5.92□□□□□ -1.46
CPSF4-211ENST00000471455 DEFA3P59666 94 aa5.92□□□□□ -1.46
CPSF4-211ENST00000471455 DNLZQ5SXM8 178 aa5.92□□□□□ -1.46
CPSF4-211ENST00000471455 DGAT2L7PQ6IED9 249 aa5.92□□□□□ -1.46
CPSF4-211ENST00000471455 ZFP82Q8N141 532 aa5.92□□□□□ -1.46
CPSF4-211ENST00000471455 HSD17B11Q8NBQ5 300 aa5.92□□□□□ -1.46
CPSF4-211ENST00000471455 ZC2HC1AQ96GY0 325 aa5.92□□□□□ -1.46
CPSF4-211ENST00000471455 SFRP2Q96HF1 295 aa5.92□□□□□ -1.46
CPSF4-211ENST00000471455 NKX6-2Q9C056 277 aaPredicted RBP5.92□□□□□ -1.46
CPSF4-211ENST00000471455 WFDC1Q9HC57 220 aa5.92□□□□□ -1.46
CPSF4-211ENST00000471455 FAT3Q8TDW7 4589 aa5.91□□□□□ -1.46
CPSF4-211ENST00000471455 A0A087WWL8 130 aa5.91□□□□□ -1.46
CPSF4-211ENST00000471455 A0A0D9SG52 128 aa5.91□□□□□ -1.46
CPSF4-211ENST00000471455 HLA-DQA1P01909 254 aa5.91□□□□□ -1.46
CPSF4-211ENST00000471455 ARMS2P0C7Q2 107 aa5.91□□□□□ -1.46
CPSF4-211ENST00000471455 UBE2D3P61077 147 aa5.91□□□□□ -1.46
CPSF4-211ENST00000471455 UBE2D2P62837 147 aa5.91□□□□□ -1.46
CPSF4-211ENST00000471455 MIAQ16674 131 aa5.91□□□□□ -1.46
CPSF4-211ENST00000471455 TMEM97Q5BJF2 176 aa5.91□□□□□ -1.46
CPSF4-211ENST00000471455 FAM162BQ5T6X4 162 aa5.91□□□□□ -1.46
CPSF4-211ENST00000471455 Q86TA4 180 aa5.91□□□□□ -1.46
CPSF4-211ENST00000471455 HIST1H2BAQ96A08 127 aa5.91□□□□□ -1.46
CPSF4-211ENST00000471455 MARVELD1Q9BSK0 173 aa5.91□□□□□ -1.46
CPSF4-211ENST00000471455 JPT2Q9H910 190 aa5.91□□□□□ -1.46
CPSF4-211ENST00000471455 TNFSF18Q9UNG2 199 aa5.91□□□□□ -1.46
CPSF4-211ENST00000471455 TRBV6-8A0A0A6YYG3 113 aa5.9□□□□□ -1.46
CPSF4-211ENST00000471455 KRBOX1C9JBD0 128 aa5.9□□□□□ -1.46
CPSF4-211ENST00000471455 USP17L23D6RBM5 183 aa5.9□□□□□ -1.46
CPSF4-211ENST00000471455 M0R036 132 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms