RNA–Protein interactions for RNA: ENST00000470826.5

FGFR1-217, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 2,281 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-217ENST00000470826 PMVKQ15126 192 aa15.56■□□□□ 0.08
FGFR1-217ENST00000470826 KIR2DL4Q99706 377 aa15.56■□□□□ 0.08
FGFR1-217ENST00000470826 SDHAF1A6NFY7 115 aa15.56■□□□□ 0.08
FGFR1-217ENST00000470826 LGALS9O00182 355 aa15.56■□□□□ 0.08
FGFR1-217ENST00000470826 SCGB1D4Q6XE38 83 aa15.56■□□□□ 0.08
FGFR1-217ENST00000470826 C9orf85Q96MD7 179 aa15.56■□□□□ 0.08
FGFR1-217ENST00000470826 TRBV27A0A0K0K1C4 114 aa15.55■□□□□ 0.08
FGFR1-217ENST00000470826 F5H697 171 aa15.55■□□□□ 0.08
FGFR1-217ENST00000470826 EMP1P54849 157 aa15.55■□□□□ 0.08
FGFR1-217ENST00000470826 PAPPA-AS1Q5QFB9 102 aa15.55■□□□□ 0.08
FGFR1-217ENST00000470826 TMEM141Q96I45 108 aa15.55■□□□□ 0.08
FGFR1-217ENST00000470826 TIMM17AQ99595 171 aa15.55■□□□□ 0.08
FGFR1-217ENST00000470826 PRO0461Q9UI25 63 aa15.55■□□□□ 0.08
FGFR1-217ENST00000470826 IGHV3-16A0A0C4DH30 117 aa15.55■□□□□ 0.08
FGFR1-217ENST00000470826 TRBV6-5A0A0K0K1A5 114 aa15.55■□□□□ 0.08
FGFR1-217ENST00000470826 ODF3Q96PU9 254 aa15.55■□□□□ 0.08
FGFR1-217ENST00000470826 ZNF688P0C7X2 276 aa15.54■□□□□ 0.08
FGFR1-217ENST00000470826 UBE2D1P51668 147 aa15.54■□□□□ 0.08
FGFR1-217ENST00000470826 CRYBG3Q68DQ2 2970 aa15.54■□□□□ 0.08
FGFR1-217ENST00000470826 MDFICQ9P1T7 246 aa15.54■□□□□ 0.08
FGFR1-217ENST00000470826 C10orf99Q6UWK7 81 aa15.53■□□□□ 0.08
FGFR1-217ENST00000470826 PGPEP1Q9NXJ5 209 aa15.53■□□□□ 0.08
FGFR1-217ENST00000470826 MAP1AP78559 2803 aaPredicted RBP15.53■□□□□ 0.08
FGFR1-217ENST00000470826 A0A0J9YX75 114 aa15.52■□□□□ 0.08
FGFR1-217ENST00000470826 TMEM238LA0A1B0GVL6 79 aa15.52■□□□□ 0.08
FGFR1-217ENST00000470826 A6NJY4 79 aa15.52■□□□□ 0.08
FGFR1-217ENST00000470826 GAGE13Q4V321 117 aa15.52■□□□□ 0.08
FGFR1-217ENST00000470826 TRAV12-2A0A075B6T6 113 aa15.52■□□□□ 0.07
FGFR1-217ENST00000470826 FAM74A4Q5TZK3 123 aa15.52■□□□□ 0.07
FGFR1-217ENST00000470826 SH2D6Q7Z4S9 175 aa15.52■□□□□ 0.07
FGFR1-217ENST00000470826 B4DSR2 109 aa15.51■□□□□ 0.07
FGFR1-217ENST00000470826 HERVK_113P61574 105 aa15.51■□□□□ 0.07
FGFR1-217ENST00000470826 SRSF9Q13242 221 aaKnown RBP eCLIP15.51■□□□□ 0.07
FGFR1-217ENST00000470826 ETDBQ3ZM63 59 aa15.51■□□□□ 0.07
FGFR1-217ENST00000470826 A0A0J9YY99 117 aa15.51■□□□□ 0.07
FGFR1-217ENST00000470826 IGHV4-59P01825 116 aa15.51■□□□□ 0.07
FGFR1-217ENST00000470826 ZNF876PQ49A33 203 aa15.51■□□□□ 0.07
FGFR1-217ENST00000470826 Q8N1Y9 231 aa15.51■□□□□ 0.07
FGFR1-217ENST00000470826 MTURNQ8N3F0 131 aa15.51■□□□□ 0.07
FGFR1-217ENST00000470826 ZNRF2Q8NHG8 242 aa15.51■□□□□ 0.07
FGFR1-217ENST00000470826 M0QY20 66 aa15.5■□□□□ 0.07
FGFR1-217ENST00000470826 IGKV3-20P01619 116 aa15.5■□□□□ 0.07
FGFR1-217ENST00000470826 TSPEAR-AS2P59090 65 aa15.5■□□□□ 0.07
FGFR1-217ENST00000470826 MRPL16Q9NX20 251 aaKnown RBP15.5■□□□□ 0.07
FGFR1-217ENST00000470826 K7EQG2 157 aa15.49■□□□□ 0.07
FGFR1-217ENST00000470826 SNRPD3P62318 126 aaKnown RBP15.49■□□□□ 0.07
FGFR1-217ENST00000470826 TMEM238C9JI98 176 aa15.48■□□□□ 0.07
FGFR1-217ENST00000470826 ZNF256Q9Y2P7 627 aaPredicted RBP15.48■□□□□ 0.07
FGFR1-217ENST00000470826 DEFB112Q30KQ8 113 aa15.48■□□□□ 0.07
FGFR1-217ENST00000470826 SYT8Q8NBV8 401 aa15.48■□□□□ 0.07
FGFR1-217ENST00000470826 ZNF56Q15929 161 aa15.47■□□□□ 0.07
FGFR1-217ENST00000470826 TMEM170BQ5T4T1 132 aa15.47■□□□□ 0.07
FGFR1-217ENST00000470826 TSPAN13O95857 204 aa15.47■□□□□ 0.07
FGFR1-217ENST00000470826 NSUN5P1Q3KNT7 163 aa15.47■□□□□ 0.07
FGFR1-217ENST00000470826 SPAG8Q99932 426 aaPredicted RBP15.47■□□□□ 0.07
FGFR1-217ENST00000470826 CSMD2Q7Z408 3487 aa15.47■□□□□ 0.07
FGFR1-217ENST00000470826 IGHV1OR15-1A0A075B7D0 117 aa15.46■□□□□ 0.07
FGFR1-217ENST00000470826 TMEM89A2RUT3 159 aa15.46■□□□□ 0.07
FGFR1-217ENST00000470826 SPINK13Q1W4C9 94 aa15.46■□□□□ 0.07
FGFR1-217ENST00000470826 AMELXQ99217 191 aa15.46■□□□□ 0.07
FGFR1-217ENST00000470826 GATA3P23771 443 aa15.46■□□□□ 0.06
FGFR1-217ENST00000470826 TSSC4Q9Y5U2 329 aaPredicted RBP15.46■□□□□ 0.06
FGFR1-217ENST00000470826 J3QR89 54 aa15.45■□□□□ 0.06
FGFR1-217ENST00000470826 RHOHQ15669 191 aa15.45■□□□□ 0.06
FGFR1-217ENST00000470826 IGHV3-30P01768 117 aa15.45■□□□□ 0.06
FGFR1-217ENST00000470826 P0DMU3 169 aa15.45■□□□□ 0.06
FGFR1-217ENST00000470826 FAM231AP0DMU4 169 aa15.45■□□□□ 0.06
FGFR1-217ENST00000470826 FAM231CP0DMU5 169 aa15.45■□□□□ 0.06
FGFR1-217ENST00000470826 IGHV3-30-5P0DP03 117 aa15.45■□□□□ 0.06
FGFR1-217ENST00000470826 SLC25A29Q8N8R3 303 aa15.45■□□□□ 0.06
FGFR1-217ENST00000470826 TRPT1Q86TN4 253 aaKnown RBP15.44■□□□□ 0.06
FGFR1-217ENST00000470826 NFE4Q86UQ8 179 aa15.44■□□□□ 0.06
FGFR1-217ENST00000470826 NDUFA11Q86Y39 141 aa15.44■□□□□ 0.06
FGFR1-217ENST00000470826 OPRPNQ99935 248 aaPredicted RBP15.44■□□□□ 0.06
FGFR1-217ENST00000470826 SYNJ2BPP57105 145 aa15.43■□□□□ 0.06
FGFR1-217ENST00000470826 UBE2D3P61077 147 aa15.43■□□□□ 0.06
FGFR1-217ENST00000470826 UBE2D2P62837 147 aa15.43■□□□□ 0.06
FGFR1-217ENST00000470826 DLX4Q92988 240 aaPredicted RBP15.43■□□□□ 0.06
FGFR1-217ENST00000470826 CFAP46Q8IYW2 2715 aa15.43■□□□□ 0.06
FGFR1-217ENST00000470826 GAGE12HA6NDE8 117 aa15.43■□□□□ 0.06
FGFR1-217ENST00000470826 APOMO95445 188 aa15.43■□□□□ 0.06
FGFR1-217ENST00000470826 CFAP126Q5VTH2 177 aa15.43■□□□□ 0.06
FGFR1-217ENST00000470826 J3QQQ9 107 aa15.42■□□□□ 0.06
FGFR1-217ENST00000470826 INSL3P51460 131 aa15.42■□□□□ 0.06
FGFR1-217ENST00000470826 SPG11Q96JI7 2443 aa15.42■□□□□ 0.06
FGFR1-217ENST00000470826 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.42■□□□□ 0.067e-7■■■■□ 19.5
FGFR1-217ENST00000470826 SMCPP49901 116 aaPredicted RBP15.42■□□□□ 0.06
FGFR1-217ENST00000470826 SPATA25Q9BR10 227 aa15.42■□□□□ 0.06
FGFR1-217ENST00000470826 RNF152Q8N8N0 203 aa15.41■□□□□ 0.06
FGFR1-217ENST00000470826 NRGNQ92686 78 aa15.41■□□□□ 0.06
FGFR1-217ENST00000470826 GTSF1LQ9H1H1 148 aa15.41■□□□□ 0.06
FGFR1-217ENST00000470826 CFC1BP0CG36 223 aa15.41■□□□□ 0.06
FGFR1-217ENST00000470826 CFC1P0CG37 223 aa15.41■□□□□ 0.06
FGFR1-217ENST00000470826 AZU1P20160 251 aa15.41■□□□□ 0.06
FGFR1-217ENST00000470826 SFTA2Q6UW10 78 aa15.41■□□□□ 0.06
FGFR1-217ENST00000470826 C20orf203Q8NBC4 194 aa15.41■□□□□ 0.06
FGFR1-217ENST00000470826 SIGMAR1Q99720 223 aa15.41■□□□□ 0.06
FGFR1-217ENST00000470826 LOC107984156A0A0G2JMH3 177 aa15.4■□□□□ 0.06
FGFR1-217ENST00000470826 ARL17AQ8IVW1 177 aa15.4■□□□□ 0.06
FGFR1-217ENST00000470826 TMEM223A0PJW6 202 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms