RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 CRIP1P50238 77 aa2.58□□□□□ -2
COL9A1-206ENST00000470652 PPT1P50897 306 aa2.58□□□□□ -2
COL9A1-206ENST00000470652 TAS2R45P59539 299 aa2.58□□□□□ -2
COL9A1-206ENST00000470652 EIF5AP63241 154 aaKnown RBP2.58□□□□□ -2
COL9A1-206ENST00000470652 RPL19P84098 196 aaKnown RBP2.58□□□□□ -2
COL9A1-206ENST00000470652 OR5I1Q13606 314 aa2.58□□□□□ -2
COL9A1-206ENST00000470652 GUK1Q16774 197 aa2.58□□□□□ -2
COL9A1-206ENST00000470652 DEFB135Q30KP9 77 aa2.58□□□□□ -2
COL9A1-206ENST00000470652 DEFB121Q5J5C9 76 aa2.58□□□□□ -2
COL9A1-206ENST00000470652 ZNF767PQ75MW2 155 aa2.58□□□□□ -2
COL9A1-206ENST00000470652 Q86TA4 180 aa2.58□□□□□ -2
COL9A1-206ENST00000470652 ZFAND2AQ8N6M9 145 aa2.58□□□□□ -2
COL9A1-206ENST00000470652 OR8A1Q8NGG7 326 aa2.58□□□□□ -2
COL9A1-206ENST00000470652 NARS2Q96I59 477 aaKnown RBP2.58□□□□□ -2
COL9A1-206ENST00000470652 IGF2BP2-AS1Q96M15 143 aa2.58□□□□□ -2
COL9A1-206ENST00000470652 SAV1Q9H4B6 383 aaPredicted RBP2.58□□□□□ -2
COL9A1-206ENST00000470652 OTORQ9NRC9 128 aa2.58□□□□□ -2
COL9A1-206ENST00000470652 NAGKQ9UJ70 344 aa2.58□□□□□ -2
COL9A1-206ENST00000470652 TRAV1-1A0A0B4J248 108 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 TRAV12-3A0A0B4J271 114 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 TRAV25A0A0B4J276 109 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 MUC21A0A0G2JKD1 596 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 MUC21A0A140T8X8 626 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 ZNF705GA8MUZ8 300 aaPredicted RBP2.57□□□□□ -2
COL9A1-206ENST00000470652 M0R036 132 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 CA1P00915 261 aaPredicted RBP2.57□□□□□ -2
COL9A1-206ENST00000470652 IGLV2-8P01709 118 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 HLA-DRB4P13762 266 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 HTN1P15515 57 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 RNASE4P34096 147 aaKnown RBP2.57□□□□□ -2
COL9A1-206ENST00000470652 RPL35P42766 123 aaKnown RBP2.57□□□□□ -2
COL9A1-206ENST00000470652 RAB5CP51148 216 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 MEF2BQ02080 365 aaPredicted RBP2.57□□□□□ -2
COL9A1-206ENST00000470652 CENPWQ5EE01 88 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 CLLU1Q5K131 121 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 DPPA3Q6W0C5 159 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 C1orf158Q8N1D5 194 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 C5orf17Q8NAS9 161 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 FAM104AQ969W3 186 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 ZC2HC1AQ96GY0 325 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 FAM19A4Q96LR4 140 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 FAM210AQ96ND0 272 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 SLC50A1Q9BRV3 221 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 EIF5A2Q9GZV4 153 aaKnown RBP2.57□□□□□ -2
COL9A1-206ENST00000470652 TREM1Q9NP99 234 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 TMEM167BQ9NRX6 74 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 EPDR1Q9UM22 224 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 PSG8Q9UQ74 426 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 ARL2-SNX15V9GYD0 113 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 HLA-DRB4X5D2U9 266 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 ALMS1Q8TCU4 4167 aa2.57□□□□□ -2
COL9A1-206ENST00000470652 DNAH10Q8IVF4 4471 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 A0A1W2PRE2 83 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 GRIFINA4D1Z8 144 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 GNRH2O43555 120 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 HBE1P02100 147 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 CD5P06127 495 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 SFTA3P0C7M3 94 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 MGST1P10620 155 aaKnown RBP2.56□□□□□ -2
COL9A1-206ENST00000470652 BMI1P35226 326 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 INSL3P51460 131 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 ZNF138P52744 262 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 EMP1P54849 157 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 SNRPD3P62318 126 aaKnown RBP2.56□□□□□ -2
COL9A1-206ENST00000470652 PAFAH1B2P68402 229 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 PSG9Q00887 426 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 FLI1Q01543 452 aaPredicted RBP2.56□□□□□ -2
COL9A1-206ENST00000470652 PDE6HQ13956 83 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 TMEM183BQ1AE95 376 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 EIF5AL1Q6IS14 154 aaKnown RBP2.56□□□□□ -2
COL9A1-206ENST00000470652 FOXI2Q6ZQN5 318 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 OR2K2Q8NGT1 345 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 CMTM2Q8TAZ6 248 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 LINC00477Q96M19 166 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 GPR82Q96P67 336 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 RNASE7Q9H1E1 156 aaKnown RBP2.56□□□□□ -2
COL9A1-206ENST00000470652 TUBA4BQ9H853 241 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 MANBALQ9NQG1 85 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 MED9Q9NWA0 146 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 ZNF492Q9P255 531 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 VAX2Q9UIW0 290 aa2.56□□□□□ -2
COL9A1-206ENST00000470652 TIMM8BQ9Y5J9 83 aaPredicted RBP2.56□□□□□ -2
COL9A1-206ENST00000470652 DNAH2Q9P225 4427 aa2.55□□□□□ -2
COL9A1-206ENST00000470652 LOC102724200A0A096LPH7 203 aaPredicted RBP2.55□□□□□ -2
COL9A1-206ENST00000470652 TRAV2A0A0B4J234 112 aa2.55□□□□□ -2
COL9A1-206ENST00000470652 PLAC8L1A1L4L8 177 aa2.55□□□□□ -2
COL9A1-206ENST00000470652 LINC00862A6NCI5 91 aa2.55□□□□□ -2
COL9A1-206ENST00000470652 A8MTW9 85 aa2.55□□□□□ -2
COL9A1-206ENST00000470652 ZNF727A8MUV8 499 aa2.55□□□□□ -2
COL9A1-206ENST00000470652 SH2D1AO60880 128 aa2.55□□□□□ -2
COL9A1-206ENST00000470652 ZNF324O75467 553 aaPredicted RBP2.55□□□□□ -2
COL9A1-206ENST00000470652 SCO1O75880 301 aa2.55□□□□□ -2
COL9A1-206ENST00000470652 GCGP01275 180 aa2.55□□□□□ -2
COL9A1-206ENST00000470652 LTAP01374 205 aa2.55□□□□□ -2
COL9A1-206ENST00000470652 TCL1AP56279 114 aa2.55□□□□□ -2
COL9A1-206ENST00000470652 RAB14P61106 215 aa2.55□□□□□ -2
COL9A1-206ENST00000470652 EBLN2Q6P2I7 272 aa2.55□□□□□ -2
COL9A1-206ENST00000470652 BAGE2Q86Y30 109 aa2.55□□□□□ -2
COL9A1-206ENST00000470652 OR10J6PQ8NGY7 276 aa2.55□□□□□ -2
COL9A1-206ENST00000470652 KLF12Q9Y4X4 402 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms