RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 COL5A1-AS1Q5SY13 56 aa6.37□□□□□ -1.39
SYNGAP1-205ENST00000470232 EBLN2Q6P2I7 272 aa6.37□□□□□ -1.39
SYNGAP1-205ENST00000470232 C16orf54Q6UWD8 224 aa6.37□□□□□ -1.39
SYNGAP1-205ENST00000470232 ATOH7Q8N100 152 aa6.37□□□□□ -1.39
SYNGAP1-205ENST00000470232 LYPD1Q8N2G4 141 aa6.37□□□□□ -1.39
SYNGAP1-205ENST00000470232 GTSF1Q8WW33 167 aa6.37□□□□□ -1.39
SYNGAP1-205ENST00000470232 CHCHD1Q96BP2 118 aaKnown RBP6.37□□□□□ -1.39
SYNGAP1-205ENST00000470232 RNF125Q96EQ8 232 aa6.37□□□□□ -1.39
SYNGAP1-205ENST00000470232 CLEC5AQ9NY25 188 aa6.37□□□□□ -1.39
SYNGAP1-205ENST00000470232 CELA1Q9UNI1 258 aa6.37□□□□□ -1.39
SYNGAP1-205ENST00000470232 ZFP30Q9Y2G7 519 aa6.37□□□□□ -1.39
SYNGAP1-205ENST00000470232 TRAV9-2A0A087WT02 112 aa6.36□□□□□ -1.39
SYNGAP1-205ENST00000470232 TEX48A0A1B0GUV7 120 aa6.36□□□□□ -1.39
SYNGAP1-205ENST00000470232 SPART-AS1P0CW21 52 aa6.36□□□□□ -1.39
SYNGAP1-205ENST00000470232 CSN1S1P47710 185 aa6.36□□□□□ -1.39
SYNGAP1-205ENST00000470232 FOXA3P55318 350 aaPredicted RBP6.36□□□□□ -1.39
SYNGAP1-205ENST00000470232 PSG3Q16557 428 aa6.36□□□□□ -1.39
SYNGAP1-205ENST00000470232 SIGLEC15Q6ZMC9 328 aa6.36□□□□□ -1.39
SYNGAP1-205ENST00000470232 C6orf223Q8N319 242 aa6.36□□□□□ -1.39
SYNGAP1-205ENST00000470232 ZC2HC1AQ96GY0 325 aa6.36□□□□□ -1.39
SYNGAP1-205ENST00000470232 C17orf77Q96MU5 243 aa6.36□□□□□ -1.39
SYNGAP1-205ENST00000470232 C1QTNF4Q9BXJ3 329 aa6.36□□□□□ -1.39
SYNGAP1-205ENST00000470232 MS4A6AQ9H2W1 248 aa6.36□□□□□ -1.39
SYNGAP1-205ENST00000470232 AGRNO00468 2067 aa6.35□□□□□ -1.39
SYNGAP1-205ENST00000470232 A0A1B0GUT8 65 aa6.35□□□□□ -1.39
SYNGAP1-205ENST00000470232 A0A1B0GW15 77 aa6.35□□□□□ -1.39
SYNGAP1-205ENST00000470232 TMEM189A5PLL7 270 aa6.35□□□□□ -1.39
SYNGAP1-205ENST00000470232 F8W735 103 aaPredicted RBP6.35□□□□□ -1.39
SYNGAP1-205ENST00000470232 IGLV2-11P01706 119 aa6.35□□□□□ -1.39
SYNGAP1-205ENST00000470232 GIG44P09565 113 aaPredicted RBP6.35□□□□□ -1.39
SYNGAP1-205ENST00000470232 CT45A10P0DMU9 189 aa6.35□□□□□ -1.39
SYNGAP1-205ENST00000470232 SPATA12Q7Z6I5 190 aa6.35□□□□□ -1.39
SYNGAP1-205ENST00000470232 TRPT1Q86TN4 253 aaKnown RBP6.35□□□□□ -1.39
SYNGAP1-205ENST00000470232 URB1-AS1Q96HZ7 61 aa6.35□□□□□ -1.39
SYNGAP1-205ENST00000470232 ZNF414Q96IQ9 312 aa6.35□□□□□ -1.39
SYNGAP1-205ENST00000470232 TMEM70Q9BUB7 260 aa6.35□□□□□ -1.39
SYNGAP1-205ENST00000470232 AAMDCQ9H7C9 122 aa6.35□□□□□ -1.39
SYNGAP1-205ENST00000470232 RABAC1Q9UI14 185 aa6.35□□□□□ -1.39
SYNGAP1-205ENST00000470232 SRRM2Q9UQ35 2752 aaKnown RBP6.34□□□□□ -1.39
SYNGAP1-205ENST00000470232 IGHV3-49A0A0A0MS15 119 aa6.34□□□□□ -1.39
SYNGAP1-205ENST00000470232 IGHV1-24A0A0C4DH33 117 aa6.34□□□□□ -1.39
SYNGAP1-205ENST00000470232 SERTM2A0A1B0GWG4 89 aa6.34□□□□□ -1.39
SYNGAP1-205ENST00000470232 MRPS12O15235 138 aaKnown RBP6.34□□□□□ -1.39
SYNGAP1-205ENST00000470232 DLEU1O43261 78 aa6.34□□□□□ -1.39
SYNGAP1-205ENST00000470232 LEPROTL1O95214 131 aa6.34□□□□□ -1.39
SYNGAP1-205ENST00000470232 CTSGP08311 255 aa6.34□□□□□ -1.39
SYNGAP1-205ENST00000470232 OR5AL1P0C617 328 aa6.34□□□□□ -1.39
SYNGAP1-205ENST00000470232 ARMS2P0C7Q2 107 aa6.34□□□□□ -1.39
SYNGAP1-205ENST00000470232 LINC00614P0C842 121 aa6.34□□□□□ -1.39
SYNGAP1-205ENST00000470232 S100A7P31151 101 aa6.34□□□□□ -1.39
SYNGAP1-205ENST00000470232 PSG9Q00887 426 aa6.34□□□□□ -1.39
SYNGAP1-205ENST00000470232 Q6AWC8 147 aa6.34□□□□□ -1.39
SYNGAP1-205ENST00000470232 FA2HQ7L5A8 372 aa6.34□□□□□ -1.39
SYNGAP1-205ENST00000470232 GATD1Q8NB37 220 aa6.34□□□□□ -1.39
SYNGAP1-205ENST00000470232 NDFIP1Q9BT67 221 aa6.34□□□□□ -1.39
SYNGAP1-205ENST00000470232 TMEM191AQ9H0A3 160 aa6.34□□□□□ -1.39
SYNGAP1-205ENST00000470232 IGHV3OR16-13A0A075B7E8 117 aa6.33□□□□□ -1.4
SYNGAP1-205ENST00000470232 IGHV3-74A0A0B4J1X5 117 aa6.33□□□□□ -1.4
SYNGAP1-205ENST00000470232 NBDYA0A0U1RRE5 68 aa6.33□□□□□ -1.4
SYNGAP1-205ENST00000470232 SMIM9A6NGZ8 99 aa6.33□□□□□ -1.4
SYNGAP1-205ENST00000470232 APOHP02749 345 aaPredicted RBP6.33□□□□□ -1.4
SYNGAP1-205ENST00000470232 PRB4P10163 310 aaPredicted RBP6.33□□□□□ -1.4
SYNGAP1-205ENST00000470232 GAGE1Q13065 139 aa6.33□□□□□ -1.4
SYNGAP1-205ENST00000470232 PDE6HQ13956 83 aa6.33□□□□□ -1.4
SYNGAP1-205ENST00000470232 MAJINQ3KP22 176 aa6.33□□□□□ -1.4
SYNGAP1-205ENST00000470232 PET117Q6UWS5 81 aa6.33□□□□□ -1.4
SYNGAP1-205ENST00000470232 LINC00173Q6ZV60 143 aa6.33□□□□□ -1.4
SYNGAP1-205ENST00000470232 C15orf53Q8NAA6 179 aa6.33□□□□□ -1.4
SYNGAP1-205ENST00000470232 CSNK1G2-AS1Q8NCQ2 148 aa6.33□□□□□ -1.4
SYNGAP1-205ENST00000470232 C8orf49Q96NF6 230 aa6.33□□□□□ -1.4
SYNGAP1-205ENST00000470232 TMEM208Q9BTX3 173 aa6.33□□□□□ -1.4
SYNGAP1-205ENST00000470232 MAP1LC3CQ9BXW4 147 aa6.33□□□□□ -1.4
SYNGAP1-205ENST00000470232 HSPB8Q9UJY1 196 aa6.33□□□□□ -1.4
SYNGAP1-205ENST00000470232 LAMTOR2Q9Y2Q5 125 aa6.33□□□□□ -1.4
SYNGAP1-205ENST00000470232 MRPS16Q9Y3D3 137 aaKnown RBP6.33□□□□□ -1.4
SYNGAP1-205ENST00000470232 GOLT1BQ9Y3E0 138 aa6.33□□□□□ -1.4
SYNGAP1-205ENST00000470232 VPS13BQ7Z7G8 4022 aa6.33□□□□□ -1.4
SYNGAP1-205ENST00000470232 FAT1Q14517 4588 aa6.32□□□□□ -1.4
SYNGAP1-205ENST00000470232 MYCBP2O75592 4640 aa6.32□□□□□ -1.4
SYNGAP1-205ENST00000470232 TMSB15BA0A087X1C1 80 aa6.32□□□□□ -1.4
SYNGAP1-205ENST00000470232 HSBP1L1C9JCN9 74 aa6.32□□□□□ -1.4
SYNGAP1-205ENST00000470232 FAM229AH3BQW9 127 aa6.32□□□□□ -1.4
SYNGAP1-205ENST00000470232 SYS1-DBNDD2H3BUS1 97 aa6.32□□□□□ -1.4
SYNGAP1-205ENST00000470232 M0R3E3 92 aa6.32□□□□□ -1.4
SYNGAP1-205ENST00000470232 SH2D1AO60880 128 aa6.32□□□□□ -1.4
SYNGAP1-205ENST00000470232 RPL7P18124 248 aaKnown RBP6.32□□□□□ -1.4
SYNGAP1-205ENST00000470232 TSPOP30536 169 aa6.32□□□□□ -1.4
SYNGAP1-205ENST00000470232 HINT1P49773 126 aaPredicted RBP6.32□□□□□ -1.4
SYNGAP1-205ENST00000470232 RPS20P60866 119 aaKnown RBP6.32□□□□□ -1.4
SYNGAP1-205ENST00000470232 TPPP3Q9BW30 176 aa6.32□□□□□ -1.4
SYNGAP1-205ENST00000470232 ST20Q9HBF5 79 aa6.32□□□□□ -1.4
SYNGAP1-205ENST00000470232 TIMM8BQ9Y5J9 83 aaPredicted RBP6.32□□□□□ -1.4
SYNGAP1-205ENST00000470232 NACAE9PAV3 2078 aa6.31□□□□□ -1.4
SYNGAP1-205ENST00000470232 IGKV2-40A0A087WW87 121 aaPredicted RBP6.31□□□□□ -1.4
SYNGAP1-205ENST00000470232 FBLL1A6NHQ2 334 aaKnown RBP6.31□□□□□ -1.4
SYNGAP1-205ENST00000470232 KNCNA6PVL3 124 aa6.31□□□□□ -1.4
SYNGAP1-205ENST00000470232 IGKV2D-40P01614 121 aaPredicted RBP6.31□□□□□ -1.4
SYNGAP1-205ENST00000470232 HTN3P15516 51 aa6.31□□□□□ -1.4
SYNGAP1-205ENST00000470232 EMP1P54849 157 aa6.31□□□□□ -1.4
SYNGAP1-205ENST00000470232 SAPCD1Q5SSQ6 148 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms