RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 IL15RAQ13261 267 aa5.81□□□□□ -1.48
CCDC171-204ENST00000470191 ZFP69Q49AA0 526 aa5.81□□□□□ -1.48
CCDC171-204ENST00000470191 SMUG1Q53HV7 270 aa5.81□□□□□ -1.48
CCDC171-204ENST00000470191 ATRAIDQ6UW56 229 aa5.81□□□□□ -1.48
CCDC171-204ENST00000470191 HSD17B11Q8NBQ5 300 aa5.81□□□□□ -1.48
CCDC171-204ENST00000470191 OR10G9Q8NGN4 311 aa5.81□□□□□ -1.48
CCDC171-204ENST00000470191 PTH2Q96A98 100 aa5.81□□□□□ -1.48
CCDC171-204ENST00000470191 SDHCQ99643 169 aaPredicted RBP5.81□□□□□ -1.48
CCDC171-204ENST00000470191 NUDT15Q9NV35 164 aa5.81□□□□□ -1.48
CCDC171-204ENST00000470191 H3BVH4 76 aa5.8□□□□□ -1.48
CCDC171-204ENST00000470191 PHOX2AO14813 284 aa5.8□□□□□ -1.48
CCDC171-204ENST00000470191 IL7P13232 177 aa5.8□□□□□ -1.48
CCDC171-204ENST00000470191 ANKRD39Q53RE8 183 aa5.8□□□□□ -1.48
CCDC171-204ENST00000470191 MPV17L2Q567V2 206 aa5.8□□□□□ -1.48
CCDC171-204ENST00000470191 DGAT2L7PQ6IED9 249 aa5.8□□□□□ -1.48
CCDC171-204ENST00000470191 UFSP1Q6NVU6 142 aa5.8□□□□□ -1.48
CCDC171-204ENST00000470191 SDIM1Q6ZPB5 146 aa5.8□□□□□ -1.48
CCDC171-204ENST00000470191 OR10G7Q8NGN6 311 aa5.8□□□□□ -1.48
CCDC171-204ENST00000470191 SMIM3Q9BZL3 60 aa5.8□□□□□ -1.48
CCDC171-204ENST00000470191 PSG8Q9UQ74 426 aa5.8□□□□□ -1.48
CCDC171-204ENST00000470191 A0A087WYN8 130 aa5.79□□□□□ -1.48
CCDC171-204ENST00000470191 A0A1W2PPV4 95 aa5.79□□□□□ -1.48
CCDC171-204ENST00000470191 PLA2G10O15496 165 aa5.79□□□□□ -1.48
CCDC171-204ENST00000470191 LYRM1O43325 122 aa5.79□□□□□ -1.48
CCDC171-204ENST00000470191 CNPY1Q3B7I2 92 aa5.79□□□□□ -1.48
CCDC171-204ENST00000470191 SCGB1C1Q8TD33 95 aa5.79□□□□□ -1.48
CCDC171-204ENST00000470191 CHCHD5Q9BSY4 110 aa5.79□□□□□ -1.48
CCDC171-204ENST00000470191 CHCHD7Q9BUK0 85 aa5.79□□□□□ -1.48
CCDC171-204ENST00000470191 KIF25-AS1Q9Y6Z4 181 aa5.79□□□□□ -1.48
CCDC171-204ENST00000470191 IGLV10-54A0A075B6I4 117 aa5.78□□□□□ -1.48
CCDC171-204ENST00000470191 IGKV3D-20A0A0C4DH25 116 aa5.78□□□□□ -1.48
CCDC171-204ENST00000470191 hDV102S1A0JD36 115 aa5.78□□□□□ -1.48
CCDC171-204ENST00000470191 GRIFINA4D1Z8 144 aa5.78□□□□□ -1.48
CCDC171-204ENST00000470191 K7EQM0 130 aa5.78□□□□□ -1.48
CCDC171-204ENST00000470191 TCRAP04437 139 aa5.78□□□□□ -1.48
CCDC171-204ENST00000470191 RAB2AP61019 212 aa5.78□□□□□ -1.48
CCDC171-204ENST00000470191 RPL36AP83881 106 aaKnown RBP5.78□□□□□ -1.48
CCDC171-204ENST00000470191 RPL19P84098 196 aaKnown RBP5.78□□□□□ -1.48
CCDC171-204ENST00000470191 FLI1Q01543 452 aaPredicted RBP5.78□□□□□ -1.48
CCDC171-204ENST00000470191 RPL36ALQ969Q0 106 aaKnown RBP5.78□□□□□ -1.48
CCDC171-204ENST00000470191 LINC01600Q96MT4 127 aa5.78□□□□□ -1.48
CCDC171-204ENST00000470191 KRTAP9-8Q9BYQ0 159 aa5.78□□□□□ -1.48
CCDC171-204ENST00000470191 TRAV34A0A0B4J273 112 aa5.77□□□□□ -1.49
CCDC171-204ENST00000470191 B4DEV8 164 aa5.77□□□□□ -1.49
CCDC171-204ENST00000470191 H0YIZ8 118 aa5.77□□□□□ -1.49
CCDC171-204ENST00000470191 M0R036 132 aa5.77□□□□□ -1.49
CCDC171-204ENST00000470191 M0R381 172 aa5.77□□□□□ -1.49
CCDC171-204ENST00000470191 RHODO00212 210 aa5.77□□□□□ -1.49
CCDC171-204ENST00000470191 PTTG1O95997 202 aa5.77□□□□□ -1.49
CCDC171-204ENST00000470191 ARMS2P0C7Q2 107 aa5.77□□□□□ -1.49
CCDC171-204ENST00000470191 ARL14EPLP0DKL9 152 aa5.77□□□□□ -1.49
CCDC171-204ENST00000470191 UBE2D3P61077 147 aa5.77□□□□□ -1.49
CCDC171-204ENST00000470191 UBE2D2P62837 147 aa5.77□□□□□ -1.49
CCDC171-204ENST00000470191 PQLC2Q6ZP29 291 aa5.77□□□□□ -1.49
CCDC171-204ENST00000470191 ARL6IP6Q8N6S5 226 aa5.77□□□□□ -1.49
CCDC171-204ENST00000470191 OR11H4Q8NGC9 324 aa5.77□□□□□ -1.49
CCDC171-204ENST00000470191 C7orf33Q8WU49 177 aa5.77□□□□□ -1.49
CCDC171-204ENST00000470191 GTSF1Q8WW33 167 aa5.77□□□□□ -1.49
CCDC171-204ENST00000470191 TRBV7-3A0A075B6L6 115 aa5.76□□□□□ -1.49
CCDC171-204ENST00000470191 IGHV3-64A0A075B6Q5 118 aa5.76□□□□□ -1.49
CCDC171-204ENST00000470191 TMSB15BA0A087X1C1 80 aa5.76□□□□□ -1.49
CCDC171-204ENST00000470191 TRBV6-8A0A0A6YYG3 113 aa5.76□□□□□ -1.49
CCDC171-204ENST00000470191 RAB5CP51148 216 aa5.76□□□□□ -1.49
CCDC171-204ENST00000470191 SUMO1P63165 101 aaKnown RBP5.76□□□□□ -1.49
CCDC171-204ENST00000470191 GAGE6Q13070 117 aa5.76□□□□□ -1.49
CCDC171-204ENST00000470191 MIAQ16674 131 aa5.76□□□□□ -1.49
CCDC171-204ENST00000470191 LINC00269Q8N2A0 174 aa5.76□□□□□ -1.49
CCDC171-204ENST00000470191 C5orf17Q8NAS9 161 aa5.76□□□□□ -1.49
CCDC171-204ENST00000470191 LYPD6BQ8NI32 183 aa5.76□□□□□ -1.49
CCDC171-204ENST00000470191 IL36BQ9NZH7 164 aa5.76□□□□□ -1.49
CCDC171-204ENST00000470191 SERTM2A0A1B0GWG4 89 aa5.75□□□□□ -1.49
CCDC171-204ENST00000470191 FABP5P3A8MUU1 101 aa5.75□□□□□ -1.49
CCDC171-204ENST00000470191 CIRBPQ14011 172 aaKnown RBP5.75□□□□□ -1.49
CCDC171-204ENST00000470191 PIK3CD-AS1Q5SR53 167 aa5.75□□□□□ -1.49
CCDC171-204ENST00000470191 WDR73Q6P4I2 378 aa5.75□□□□□ -1.49
CCDC171-204ENST00000470191 SFRP2Q96HF1 295 aa5.75□□□□□ -1.49
CCDC171-204ENST00000470191 EPDR1Q9UM22 224 aa5.75□□□□□ -1.49
CCDC171-204ENST00000470191 HSPB11Q9Y547 144 aa5.75□□□□□ -1.49
CCDC171-204ENST00000470191 PHLDA3Q9Y5J5 127 aa5.75□□□□□ -1.49
CCDC171-204ENST00000470191 ARL2-SNX15V9GYD0 113 aa5.75□□□□□ -1.49
CCDC171-204ENST00000470191 IGKV2-24A0A0C4DH68 120 aa5.74□□□□□ -1.49
CCDC171-204ENST00000470191 A0A0J9YXV3 536 aa5.74□□□□□ -1.49
CCDC171-204ENST00000470191 TPT1P13693 172 aaKnown RBP5.74□□□□□ -1.49
CCDC171-204ENST00000470191 CDC34P49427 236 aaPredicted RBP5.74□□□□□ -1.49
CCDC171-204ENST00000470191 DEFA3P59666 94 aa5.74□□□□□ -1.49
CCDC171-204ENST00000470191 ZNF56Q15929 161 aa5.74□□□□□ -1.49
CCDC171-204ENST00000470191 SAPCD1Q5SSQ6 148 aa5.74□□□□□ -1.49
CCDC171-204ENST00000470191 LCE5AQ5TCM9 118 aa5.74□□□□□ -1.49
CCDC171-204ENST00000470191 KRTAP26-1Q6PEX3 210 aa5.74□□□□□ -1.49
CCDC171-204ENST00000470191 NEXN-AS1Q8NBZ9 246 aa5.74□□□□□ -1.49
CCDC171-204ENST00000470191 SPACA4Q8TDM5 124 aa5.74□□□□□ -1.49
CCDC171-204ENST00000470191 RNF185Q96GF1 192 aa5.74□□□□□ -1.49
CCDC171-204ENST00000470191 WFDC1Q9HC57 220 aa5.74□□□□□ -1.49
CCDC171-204ENST00000470191 AP5S1Q9NUS5 200 aa5.74□□□□□ -1.49
CCDC171-204ENST00000470191 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.73□□□□□ -1.49
CCDC171-204ENST00000470191 MUC21A0A0G2JKD1 596 aa5.73□□□□□ -1.49
CCDC171-204ENST00000470191 TRBV10-1A0A0K0K1A3 114 aa5.73□□□□□ -1.49
CCDC171-204ENST00000470191 FAM240BA0A1B0GVZ2 78 aa5.73□□□□□ -1.49
CCDC171-204ENST00000470191 KRBOX1C9JBD0 128 aa5.73□□□□□ -1.49
CCDC171-204ENST00000470191 SLPIP03973 132 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms