RNA–Protein interactions for RNA: ENST00000470179.5

PGAP1-208, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 2

Gene PGAP1, Length 2,874 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-208ENST00000470179 CENPVL3A0A0U1RRI6 287 aa12.65□□□□□ -0.38
PGAP1-208ENST00000470179 ZNF815PA8K554 130 aa12.65□□□□□ -0.38
PGAP1-208ENST00000470179 MT-ATP8P03928 68 aa12.65□□□□□ -0.38
PGAP1-208ENST00000470179 SRSF9Q13242 221 aaKnown RBP eCLIP12.65□□□□□ -0.38
PGAP1-208ENST00000470179 C16orf92Q96LL3 132 aa12.65□□□□□ -0.38
PGAP1-208ENST00000470179 NOTCH2Q04721 2471 aa12.65□□□□□ -0.38
PGAP1-208ENST00000470179 OOSP1A8MZH6 123 aa12.64□□□□□ -0.39
PGAP1-208ENST00000470179 A0A087WWL8 130 aa12.64□□□□□ -0.39
PGAP1-208ENST00000470179 S100A4P26447 101 aaKnown RBP12.64□□□□□ -0.39
PGAP1-208ENST00000470179 FLNAP21333 2647 aaKnown RBP12.64□□□□□ -0.39
PGAP1-208ENST00000470179 MYMXA0A1B0GTQ4 84 aa12.63□□□□□ -0.39
PGAP1-208ENST00000470179 ATP5LO75964 103 aa12.63□□□□□ -0.39
PGAP1-208ENST00000470179 RNASE4P34096 147 aaKnown RBP12.63□□□□□ -0.39
PGAP1-208ENST00000470179 AJUBAQ96IF1 538 aa12.63□□□□□ -0.39
PGAP1-208ENST00000470179 IGHV1-69DA0A0B4J2H0 117 aa12.63□□□□□ -0.39
PGAP1-208ENST00000470179 AVPP01185 164 aa12.63□□□□□ -0.39
PGAP1-208ENST00000470179 IGHV1-69P01742 117 aa12.63□□□□□ -0.39
PGAP1-208ENST00000470179 MXRA5Q9NR99 2828 aa12.63□□□□□ -0.39
PGAP1-208ENST00000470179 TRAV26-1A0A087WT03 109 aa12.63□□□□□ -0.39
PGAP1-208ENST00000470179 CIDEAO60543 219 aa12.63□□□□□ -0.39
PGAP1-208ENST00000470179 IGKV3-20P01619 116 aa12.63□□□□□ -0.39
PGAP1-208ENST00000470179 ANXA2RQ3ZCQ2 193 aa12.63□□□□□ -0.39
PGAP1-208ENST00000470179 C2orf66Q6UXQ4 117 aa12.63□□□□□ -0.39
PGAP1-208ENST00000470179 TEX29Q8N6K0 151 aa12.63□□□□□ -0.39
PGAP1-208ENST00000470179 SMIM2Q9BVW6 85 aa12.63□□□□□ -0.39
PGAP1-208ENST00000470179 HOXA3O43365 443 aaPredicted RBP12.62□□□□□ -0.39
PGAP1-208ENST00000470179 BAALCQ8WXS3 180 aa12.62□□□□□ -0.39
PGAP1-208ENST00000470179 F8VRH5 84 aa12.62□□□□□ -0.39
PGAP1-208ENST00000470179 F8W1H4 67 aa12.62□□□□□ -0.39
PGAP1-208ENST00000470179 NPFFO15130 113 aa12.61□□□□□ -0.39
PGAP1-208ENST00000470179 CKS1BP61024 79 aa12.61□□□□□ -0.39
PGAP1-208ENST00000470179 COX8CQ7Z4L0 72 aa12.61□□□□□ -0.39
PGAP1-208ENST00000470179 TSPEAR-AS2P59090 65 aa12.61□□□□□ -0.39
PGAP1-208ENST00000470179 SUMO2P61956 95 aaKnown RBP12.61□□□□□ -0.39
PGAP1-208ENST00000470179 BRD3OSQ6XYD6 125 aa12.61□□□□□ -0.39
PGAP1-208ENST00000470179 C9orf139Q6ZV77 190 aa12.61□□□□□ -0.39
PGAP1-208ENST00000470179 RAX2Q96IS3 184 aa12.61□□□□□ -0.39
PGAP1-208ENST00000470179 RNF5Q99942 180 aa12.61□□□□□ -0.39
PGAP1-208ENST00000470179 ZNF580Q9UK33 172 aa12.61□□□□□ -0.39
PGAP1-208ENST00000470179 LINC00477Q96M19 166 aa12.6□□□□□ -0.39
PGAP1-208ENST00000470179 H7C1H1 209 aa12.6□□□□□ -0.39
PGAP1-208ENST00000470179 SAA4P35542 130 aa12.6□□□□□ -0.39
PGAP1-208ENST00000470179 WNK1Q9H4A3 2382 aa12.6□□□□□ -0.39
PGAP1-208ENST00000470179 TEX15Q9BXT5 2789 aa12.6□□□□□ -0.39
PGAP1-208ENST00000470179 FAM74A4Q5TZK3 123 aa12.59□□□□□ -0.39
PGAP1-208ENST00000470179 ATP6V0BQ99437 205 aa12.59□□□□□ -0.39
PGAP1-208ENST00000470179 PHLDA3Q9Y5J5 127 aa12.59□□□□□ -0.39
PGAP1-208ENST00000470179 C11orf86A6NJI1 115 aa12.59□□□□□ -0.39
PGAP1-208ENST00000470179 TSPAN13O95857 204 aa12.59□□□□□ -0.39
PGAP1-208ENST00000470179 NF1P21359 2839 aa12.59□□□□□ -0.39
PGAP1-208ENST00000470179 LINC01546A6NGU7 62 aa12.59□□□□□ -0.39
PGAP1-208ENST00000470179 IGHV4-38-2P0DP08 117 aa12.59□□□□□ -0.39
PGAP1-208ENST00000470179 NEXN-AS1Q8NBZ9 246 aa12.59□□□□□ -0.39
PGAP1-208ENST00000470179 ADARB2-AS1A8MUL3 147 aa12.58□□□□□ -0.4
PGAP1-208ENST00000470179 TSHBP01222 138 aa12.58□□□□□ -0.4
PGAP1-208ENST00000470179 CRYGDP07320 174 aa12.58□□□□□ -0.4
PGAP1-208ENST00000470179 CRIP2P52943 208 aaPredicted RBP12.58□□□□□ -0.4
PGAP1-208ENST00000470179 XGP55808 180 aa12.58□□□□□ -0.4
PGAP1-208ENST00000470179 Q8N6K4 173 aa12.58□□□□□ -0.4
PGAP1-208ENST00000470179 LY6EQ16553 131 aa12.58□□□□□ -0.4
PGAP1-208ENST00000470179 CDIP1Q9H305 208 aa12.58□□□□□ -0.4
PGAP1-208ENST00000470179 PIFOQ8TCI5 191 aa12.57□□□□□ -0.4
PGAP1-208ENST00000470179 JMJD1CQ15652 2540 aa12.57□□□□□ -0.4
PGAP1-208ENST00000470179 FOXI1Q12951 378 aa12.57□□□□□ -0.4
PGAP1-208ENST00000470179 TMEM170BQ5T4T1 132 aa12.57□□□□□ -0.4
PGAP1-208ENST00000470179 GPHB5Q86YW7 130 aa12.57□□□□□ -0.4
PGAP1-208ENST00000470179 F5H697 171 aa12.56□□□□□ -0.4
PGAP1-208ENST00000470179 PLNP26678 52 aa12.56□□□□□ -0.4
PGAP1-208ENST00000470179 CARD19Q96LW7 228 aa12.56□□□□□ -0.4
PGAP1-208ENST00000470179 METTL26Q96S19 204 aa12.56□□□□□ -0.4
PGAP1-208ENST00000470179 ZNF256Q9Y2P7 627 aaPredicted RBP12.56□□□□□ -0.4
PGAP1-208ENST00000470179 SETXQ7Z333 2677 aaKnown RBP12.56□□□□□ -0.4
PGAP1-208ENST00000470179 TCL1BO95988 128 aa12.56□□□□□ -0.4
PGAP1-208ENST00000470179 EBI3Q14213 229 aa12.56□□□□□ -0.4
PGAP1-208ENST00000470179 SMPXQ9UHP9 88 aa12.56□□□□□ -0.4
PGAP1-208ENST00000470179 TP53TG1Q9Y2A0 90 aa12.56□□□□□ -0.4
PGAP1-208ENST00000470179 SPINK8P0C7L1 97 aa12.55□□□□□ -0.4
PGAP1-208ENST00000470179 TRPT1Q86TN4 253 aaKnown RBP12.55□□□□□ -0.4
PGAP1-208ENST00000470179 ZFAND2AQ8N6M9 145 aa12.55□□□□□ -0.4
PGAP1-208ENST00000470179 SPATA25Q9BR10 227 aa12.55□□□□□ -0.4
PGAP1-208ENST00000470179 PRM2P04554 102 aa12.55□□□□□ -0.4
PGAP1-208ENST00000470179 CFAP126Q5VTH2 177 aa12.55□□□□□ -0.4
PGAP1-208ENST00000470179 TRAV12-2A0A075B6T6 113 aa12.54□□□□□ -0.4
PGAP1-208ENST00000470179 ELANEP08246 267 aa12.54□□□□□ -0.4
PGAP1-208ENST00000470179 CRYBA4P53673 196 aa12.54□□□□□ -0.4
PGAP1-208ENST00000470179 TOMM6Q96B49 74 aa12.54□□□□□ -0.4
PGAP1-208ENST00000470179 CYSRT1A8MQ03 144 aa12.53□□□□□ -0.4
PGAP1-208ENST00000470179 RNASE13Q5GAN3 156 aaKnown RBP12.53□□□□□ -0.4
PGAP1-208ENST00000470179 SONP18583 2426 aaKnown RBP12.53□□□□□ -0.4
PGAP1-208ENST00000470179 ANK3Q12955 4377 aaKnown RBP12.53□□□□□ -0.4
PGAP1-208ENST00000470179 NPC2P61916 151 aa12.53□□□□□ -0.4
PGAP1-208ENST00000470179 ZNF48Q96MX3 618 aaPredicted RBP12.53□□□□□ -0.4
PGAP1-208ENST00000470179 RNASE3P12724 160 aaKnown RBP12.52□□□□□ -0.4
PGAP1-208ENST00000470179 ZNRF2Q8NHG8 242 aa12.52□□□□□ -0.4
PGAP1-208ENST00000470179 GEMIN7Q9H840 131 aaKnown RBP12.52□□□□□ -0.4
PGAP1-208ENST00000470179 ACANP16112 2415 aa12.52□□□□□ -0.4
PGAP1-208ENST00000470179 J3QR89 54 aa12.52□□□□□ -0.41
PGAP1-208ENST00000470179 LY6G6DO95868 133 aa12.52□□□□□ -0.41
PGAP1-208ENST00000470179 SCGB1C2P0DMR2 95 aa12.52□□□□□ -0.41
PGAP1-208ENST00000470179 HTN1P15515 57 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms