RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 A0A0J9YX75 114 aa4.78□□□□□ -1.64
CCDC144A-212ENST00000470068 HOXB4P17483 251 aaPredicted RBP4.78□□□□□ -1.64
CCDC144A-212ENST00000470068 COL8A2P25067 703 aa4.78□□□□□ -1.64
CCDC144A-212ENST00000470068 LINC00479Q96M42 142 aa4.78□□□□□ -1.64
CCDC144A-212ENST00000470068 SCRT2Q9NQ03 307 aa4.78□□□□□ -1.64
CCDC144A-212ENST00000470068 MED13Q9UHV7 2174 aa4.78□□□□□ -1.64
CCDC144A-212ENST00000470068 A0A1B0GW54 56 aa4.77□□□□□ -1.65
CCDC144A-212ENST00000470068 COX7A2LO14548 114 aa4.77□□□□□ -1.65
CCDC144A-212ENST00000470068 TRBV12-3P01733 135 aa4.77□□□□□ -1.65
CCDC144A-212ENST00000470068 IGF1P05019 195 aa4.77□□□□□ -1.65
CCDC144A-212ENST00000470068 IGLL1P15814 213 aa4.77□□□□□ -1.65
CCDC144A-212ENST00000470068 CCL18P55774 89 aa4.77□□□□□ -1.65
CCDC144A-212ENST00000470068 SPRY4Q9C004 299 aa4.77□□□□□ -1.65
CCDC144A-212ENST00000470068 PRSS29PA6NIE9 313 aa4.77□□□□□ -1.65
CCDC144A-212ENST00000470068 BUB3O43684 328 aa4.77□□□□□ -1.65
CCDC144A-212ENST00000470068 IGKV3-20P01619 116 aa4.77□□□□□ -1.65
CCDC144A-212ENST00000470068 IGLV1-47P01700 117 aa4.77□□□□□ -1.65
CCDC144A-212ENST00000470068 MRPL35Q9NZE8 188 aaKnown RBP4.77□□□□□ -1.65
CCDC144A-212ENST00000470068 hDV102S1A0JD36 115 aa4.77□□□□□ -1.65
CCDC144A-212ENST00000470068 C19orf71A6NCJ1 209 aa4.77□□□□□ -1.65
CCDC144A-212ENST00000470068 KNCNA6PVL3 124 aa4.77□□□□□ -1.65
CCDC144A-212ENST00000470068 IGHV3-23P01764 117 aa4.77□□□□□ -1.65
CCDC144A-212ENST00000470068 IGKV1-16P04430 117 aa4.77□□□□□ -1.65
CCDC144A-212ENST00000470068 RSPO1Q2MKA7 263 aaPredicted RBP4.77□□□□□ -1.65
CCDC144A-212ENST00000470068 NLRC5Q86WI3 1866 aa4.77□□□□□ -1.65
CCDC144A-212ENST00000470068 PRR31Q5SQ13 230 aa4.77□□□□□ -1.65
CCDC144A-212ENST00000470068 CFHR4Q92496 578 aa4.77□□□□□ -1.65
CCDC144A-212ENST00000470068 NUP214P35658 2090 aaPredicted RBP4.77□□□□□ -1.65
CCDC144A-212ENST00000470068 GCN1Q92616 2671 aaKnown RBP4.77□□□□□ -1.65
CCDC144A-212ENST00000470068 IGLL5B9A064 214 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 FSHBP01225 129 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 C10orf55Q5SWW7 151 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 C11orf53Q8IXP5 236 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 C1orf43Q9BWL3 253 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 RSPO3Q9BXY4 272 aaPredicted RBP4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 KIAA1671Q9BY89 1806 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 SYNJ2BPP57105 145 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 Q6Q795 121 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 C10orf105Q8TEF2 133 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 TMEM263Q8WUH6 116 aaKnown RBP4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 AGPAT4-IT1Q9H0P7 198 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 ARFGEF3Q5TH69 2177 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 IGHV4-4A0A075B6R2 117 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 IGKV3OR2-268A0A0C4DH90 116 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 BCE1O60756 84 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 C5orf24Q7Z6I8 188 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 COX7B2Q8TF08 81 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 TRBV7-3A0A075B6L6 115 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 A0A1B0GXF2 115 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 LINC01548A6NM66 108 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 IBA57-AS1B1ANH7 110 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 SNAI2O43623 268 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 BAALC-AS2P0C853 105 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 CDPF1Q6NVV7 123 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 NFE4Q86UQ8 179 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 NDUFA11Q86Y39 141 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 FAM215AQ9Y5M1 114 aa4.76□□□□□ -1.65
CCDC144A-212ENST00000470068 IGHV3-66A0A0C4DH42 116 aa4.75□□□□□ -1.65
CCDC144A-212ENST00000470068 COX17Q14061 63 aa4.75□□□□□ -1.65
CCDC144A-212ENST00000470068 WDR86Q86TI4 376 aa4.75□□□□□ -1.65
CCDC144A-212ENST00000470068 ZNF503Q96F45 646 aa4.75□□□□□ -1.65
CCDC144A-212ENST00000470068 ZNF706Q9Y5V0 76 aaPredicted RBP4.75□□□□□ -1.65
CCDC144A-212ENST00000470068 FER1L5A0AVI2 2057 aa4.75□□□□□ -1.65
CCDC144A-212ENST00000470068 ETDCA0A1B0GVM5 59 aa4.75□□□□□ -1.65
CCDC144A-212ENST00000470068 LYPD2Q6UXB3 125 aa4.75□□□□□ -1.65
CCDC144A-212ENST00000470068 WWC2-AS2Q96NR7 200 aa4.75□□□□□ -1.65
CCDC144A-212ENST00000470068 U3KQK5 164 aa4.75□□□□□ -1.65
CCDC144A-212ENST00000470068 FAM240AA0A1B0GVK7 77 aa4.75□□□□□ -1.65
CCDC144A-212ENST00000470068 ZNRF2Q8NHG8 242 aa4.75□□□□□ -1.65
CCDC144A-212ENST00000470068 HELZP42694 1942 aaKnown RBP4.75□□□□□ -1.65
CCDC144A-212ENST00000470068 TRAV13-1A0A0B4J241 112 aa4.75□□□□□ -1.65
CCDC144A-212ENST00000470068 SNRPCP09234 159 aaKnown RBP4.75□□□□□ -1.65
CCDC144A-212ENST00000470068 SS18L2Q9UHA2 77 aa4.75□□□□□ -1.65
CCDC144A-212ENST00000470068 ODF3BA8MYP8 253 aa4.74□□□□□ -1.65
CCDC144A-212ENST00000470068 TAX1BP3O14907 124 aa4.74□□□□□ -1.65
CCDC144A-212ENST00000470068 IGHV3-48P01763 117 aa4.74□□□□□ -1.65
CCDC144A-212ENST00000470068 EGR2P11161 476 aaPredicted RBP4.74□□□□□ -1.65
CCDC144A-212ENST00000470068 GFI1BQ5VTD9 330 aa4.74□□□□□ -1.65
CCDC144A-212ENST00000470068 DIRC1Q969H9 104 aa4.74□□□□□ -1.65
CCDC144A-212ENST00000470068 FAM167A-AS1Q96KT0 104 aa4.74□□□□□ -1.65
CCDC144A-212ENST00000470068 NBEAL1Q6ZS30 2694 aa4.74□□□□□ -1.65
CCDC144A-212ENST00000470068 B5MCH6 92 aa4.74□□□□□ -1.65
CCDC144A-212ENST00000470068 C5orf56Q8N8D9 126 aa4.74□□□□□ -1.65
CCDC144A-212ENST00000470068 LINC00467Q9BRT7 94 aa4.74□□□□□ -1.65
CCDC144A-212ENST00000470068 USP24Q9UPU5 2620 aa4.74□□□□□ -1.65
CCDC144A-212ENST00000470068 C20orf203Q8NBC4 194 aa4.74□□□□□ -1.65
CCDC144A-212ENST00000470068 IGHV3-49A0A0A0MS15 119 aa4.74□□□□□ -1.65
CCDC144A-212ENST00000470068 IGHV7-81A0A0B4J1V7 117 aa4.74□□□□□ -1.65
CCDC144A-212ENST00000470068 TMEM213A2RRL7 107 aa4.74□□□□□ -1.65
CCDC144A-212ENST00000470068 A6NDX4 124 aa4.74□□□□□ -1.65
CCDC144A-212ENST00000470068 NDUFC2-KCTD14E9PQ53 114 aa4.74□□□□□ -1.65
CCDC144A-212ENST00000470068 NPC2P61916 151 aa4.74□□□□□ -1.65
CCDC144A-212ENST00000470068 DAND5Q8N907 189 aa4.74□□□□□ -1.65
CCDC144A-212ENST00000470068 FAM110AQ9BQ89 295 aa4.74□□□□□ -1.65
CCDC144A-212ENST00000470068 FGF23Q9GZV9 251 aaPredicted RBP4.74□□□□□ -1.65
CCDC144A-212ENST00000470068 PRO0255Q9UI72 69 aa4.74□□□□□ -1.65
CCDC144A-212ENST00000470068 IGHV3OR16-13A0A075B7E8 117 aa4.73□□□□□ -1.65
CCDC144A-212ENST00000470068 IGHV3-74A0A0B4J1X5 117 aa4.73□□□□□ -1.65
CCDC144A-212ENST00000470068 CCL24O00175 119 aa4.73□□□□□ -1.65
CCDC144A-212ENST00000470068 IGKV1-17P01599 117 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms