RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 GATA1P15976 413 aaPredicted RBP8.84□□□□□ -0.99
SPTLC1-204ENST00000469778 FAM3BP58499 235 aaPredicted RBP8.84□□□□□ -0.99
SPTLC1-204ENST00000469778 RAB4BP61018 213 aa8.84□□□□□ -0.99
SPTLC1-204ENST00000469778 MRPL23Q16540 153 aaKnown RBP8.84□□□□□ -0.99
SPTLC1-204ENST00000469778 RNF212Q495C1 297 aa8.84□□□□□ -0.99
SPTLC1-204ENST00000469778 LGALS9CQ6DKI2 356 aa8.84□□□□□ -0.99
SPTLC1-204ENST00000469778 UFSP1Q6NVU6 142 aa8.84□□□□□ -0.99
SPTLC1-204ENST00000469778 NAT8BQ9UHF3 227 aa8.84□□□□□ -0.99
SPTLC1-204ENST00000469778 TRBV10-1A0A0K0K1A3 114 aa8.83□□□□□ -1
SPTLC1-204ENST00000469778 A0A1B0GW15 77 aa8.83□□□□□ -1
SPTLC1-204ENST00000469778 SMIM27A0A1W2PRY6 76 aa8.83□□□□□ -1
SPTLC1-204ENST00000469778 HIGD1CA8MV81 97 aa8.83□□□□□ -1
SPTLC1-204ENST00000469778 NTF3P20783 257 aa8.83□□□□□ -1
SPTLC1-204ENST00000469778 RHOHQ15669 191 aa8.83□□□□□ -1
SPTLC1-204ENST00000469778 TWIST1Q15672 202 aa8.83□□□□□ -1
SPTLC1-204ENST00000469778 NDUFA5Q16718 116 aa8.83□□□□□ -1
SPTLC1-204ENST00000469778 C10orf91Q5T1B1 145 aa8.83□□□□□ -1
SPTLC1-204ENST00000469778 FRZBQ92765 325 aa8.83□□□□□ -1
SPTLC1-204ENST00000469778 VSIG2Q96IQ7 327 aa8.83□□□□□ -1
SPTLC1-204ENST00000469778 A0A1B0GUT8 65 aa8.82□□□□□ -1
SPTLC1-204ENST00000469778 RIGQ13278 110 aa8.82□□□□□ -1
SPTLC1-204ENST00000469778 SLC25A29Q8N8R3 303 aa8.82□□□□□ -1
SPTLC1-204ENST00000469778 IMMP2LQ96T52 175 aa8.82□□□□□ -1
SPTLC1-204ENST00000469778 CTDSP1Q9GZU7 261 aa8.82□□□□□ -1
SPTLC1-204ENST00000469778 CARHSP1Q9Y2V2 147 aaKnown RBP8.82□□□□□ -1
SPTLC1-204ENST00000469778 ICOSQ9Y6W8 199 aa8.82□□□□□ -1
SPTLC1-204ENST00000469778 CSMD3Q7Z407 3707 aa8.82□□□□□ -1
SPTLC1-204ENST00000469778 TENM2Q9NT68 2774 aa8.81□□□□□ -1
SPTLC1-204ENST00000469778 NUDT3O95989 172 aa8.81□□□□□ -1
SPTLC1-204ENST00000469778 S100A8P05109 93 aa8.81□□□□□ -1
SPTLC1-204ENST00000469778 CCL18P55774 89 aa8.81□□□□□ -1
SPTLC1-204ENST00000469778 FAM74A4Q5TZK3 123 aa8.81□□□□□ -1
SPTLC1-204ENST00000469778 C14orf178Q8N769 122 aaPredicted RBP8.81□□□□□ -1
SPTLC1-204ENST00000469778 PGLYRP4Q96LB8 373 aa8.81□□□□□ -1
SPTLC1-204ENST00000469778 SAMD10Q9BYL1 202 aa8.81□□□□□ -1
SPTLC1-204ENST00000469778 DPH3P1Q9H4G8 78 aa8.81□□□□□ -1
SPTLC1-204ENST00000469778 TMEM242Q9NWH2 141 aa8.81□□□□□ -1
SPTLC1-204ENST00000469778 KIF25-AS1Q9Y6Z4 181 aa8.81□□□□□ -1
SPTLC1-204ENST00000469778 A0A087WWL8 130 aa8.8□□□□□ -1
SPTLC1-204ENST00000469778 MUC21A0A0G2JKD1 596 aa8.8□□□□□ -1
SPTLC1-204ENST00000469778 A0A0J9YY99 117 aa8.8□□□□□ -1
SPTLC1-204ENST00000469778 MUC21A0A140T8X8 626 aa8.8□□□□□ -1
SPTLC1-204ENST00000469778 H7C1H1 209 aa8.8□□□□□ -1
SPTLC1-204ENST00000469778 TIRAPP58753 221 aa8.8□□□□□ -1
SPTLC1-204ENST00000469778 NEGR1Q7Z3B1 354 aa8.8□□□□□ -1
SPTLC1-204ENST00000469778 NUP35Q8NFH5 326 aa8.8□□□□□ -1
SPTLC1-204ENST00000469778 JPT2Q9H910 190 aa8.8□□□□□ -1
SPTLC1-204ENST00000469778 A0A096LPF7 62 aa8.79□□□□□ -1
SPTLC1-204ENST00000469778 IGHV3-73A0A0B4J1V6 119 aa8.79□□□□□ -1
SPTLC1-204ENST00000469778 LCE6AA0A183 80 aa8.79□□□□□ -1
SPTLC1-204ENST00000469778 K7EQD1 137 aa8.79□□□□□ -1
SPTLC1-204ENST00000469778 GYPEP15421 78 aa8.79□□□□□ -1
SPTLC1-204ENST00000469778 ADCYAP1P18509 176 aa8.79□□□□□ -1
SPTLC1-204ENST00000469778 SRIP30626 198 aa8.79□□□□□ -1
SPTLC1-204ENST00000469778 MSRB1Q9NZV6 116 aa8.79□□□□□ -1
SPTLC1-204ENST00000469778 STARD9Q9P2P6 4700 aa8.78□□□□□ -1
SPTLC1-204ENST00000469778 F5H697 171 aa8.78□□□□□ -1
SPTLC1-204ENST00000469778 EVI2AP22794 236 aa8.78□□□□□ -1
SPTLC1-204ENST00000469778 LINC00315P59091 139 aa8.78□□□□□ -1
SPTLC1-204ENST00000469778 SSTP61278 116 aa8.78□□□□□ -1
SPTLC1-204ENST00000469778 RHEBQ15382 184 aa8.78□□□□□ -1
SPTLC1-204ENST00000469778 ATP5L2Q7Z4Y8 100 aa8.78□□□□□ -1
SPTLC1-204ENST00000469778 SVBPQ8N300 66 aa8.78□□□□□ -1
SPTLC1-204ENST00000469778 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.78□□□□□ -1
SPTLC1-204ENST00000469778 LINC00476Q8WZB0 136 aa8.78□□□□□ -1
SPTLC1-204ENST00000469778 DNAJC30Q96LL9 226 aa8.78□□□□□ -1
SPTLC1-204ENST00000469778 TMEM191AQ9H0A3 160 aa8.78□□□□□ -1
SPTLC1-204ENST00000469778 DYNC2H1Q8NCM8 4307 aaKnown RBP8.78□□□□□ -1
SPTLC1-204ENST00000469778 A0A087WWC5 75 aa8.77□□□□□ -1.01
SPTLC1-204ENST00000469778 RPL36AP83881 106 aaKnown RBP8.77□□□□□ -1.01
SPTLC1-204ENST00000469778 Q6ZSN1 163 aa8.77□□□□□ -1.01
SPTLC1-204ENST00000469778 RPL36ALQ969Q0 106 aaKnown RBP8.77□□□□□ -1.01
SPTLC1-204ENST00000469778 TRBV7-3A0A075B6L6 115 aa8.76□□□□□ -1.01
SPTLC1-204ENST00000469778 TRAV9-1A0A075B6T8 112 aa8.76□□□□□ -1.01
SPTLC1-204ENST00000469778 SNAPINO95295 136 aa8.76□□□□□ -1.01
SPTLC1-204ENST00000469778 ZNF56Q15929 161 aa8.76□□□□□ -1.01
SPTLC1-204ENST00000469778 KCNIP4Q6PIL6 250 aa8.76□□□□□ -1.01
SPTLC1-204ENST00000469778 UBE2DNLQ8IWF7 75 aa8.76□□□□□ -1.01
SPTLC1-204ENST00000469778 CLRN3Q8NCR9 226 aa8.76□□□□□ -1.01
SPTLC1-204ENST00000469778 BTF3L4Q96K17 158 aa8.76□□□□□ -1.01
SPTLC1-204ENST00000469778 C7orf77A4D0Y5 90 aa8.75□□□□□ -1.01
SPTLC1-204ENST00000469778 M0QY20 66 aa8.75□□□□□ -1.01
SPTLC1-204ENST00000469778 LY6G6CO95867 125 aa8.75□□□□□ -1.01
SPTLC1-204ENST00000469778 PPP1R17O96001 155 aa8.75□□□□□ -1.01
SPTLC1-204ENST00000469778 RASL11AQ6T310 242 aa8.75□□□□□ -1.01
SPTLC1-204ENST00000469778 LYPD5Q6UWN5 251 aa8.75□□□□□ -1.01
SPTLC1-204ENST00000469778 ATP6V0E2Q8NHE4 81 aa8.75□□□□□ -1.01
SPTLC1-204ENST00000469778 UPK3BQ9BT76 320 aa8.75□□□□□ -1.01
SPTLC1-204ENST00000469778 NACAE9PAV3 2078 aa8.75□□□□□ -1.01
SPTLC1-204ENST00000469778 K7EP13 123 aa8.74□□□□□ -1.01
SPTLC1-204ENST00000469778 APOC3P02656 99 aa8.74□□□□□ -1.01
SPTLC1-204ENST00000469778 MGPP08493 103 aa8.74□□□□□ -1.01
SPTLC1-204ENST00000469778 S100PP25815 95 aa8.74□□□□□ -1.01
SPTLC1-204ENST00000469778 HBBP68871 147 aa8.74□□□□□ -1.01
SPTLC1-204ENST00000469778 ESRGQ1W209 222 aa8.74□□□□□ -1.01
SPTLC1-204ENST00000469778 TMEM97Q5BJF2 176 aa8.74□□□□□ -1.01
SPTLC1-204ENST00000469778 MRAP2Q96G30 205 aa8.74□□□□□ -1.01
SPTLC1-204ENST00000469778 GTSF1LQ9H1H1 148 aa8.74□□□□□ -1.01
SPTLC1-204ENST00000469778 NIT2Q9NQR4 276 aa8.74□□□□□ -1.01
SPTLC1-204ENST00000469778 MRPS16Q9Y3D3 137 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms