RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 Q9HAA7 133 aa12.18□□□□□ -0.46
BRAT1-204ENST00000469750 G3V4G9 280 aa12.18□□□□□ -0.46
BRAT1-204ENST00000469750 ICOSQ9Y6W8 199 aa12.18□□□□□ -0.46
BRAT1-204ENST00000469750 ACYP1P07311 99 aa12.18□□□□□ -0.46
BRAT1-204ENST00000469750 MSRB1Q9NZV6 116 aa12.18□□□□□ -0.46
BRAT1-204ENST00000469750 MYCNOSP40205 109 aa12.17□□□□□ -0.46
BRAT1-204ENST00000469750 PRAC2D3DTV9 90 aa12.17□□□□□ -0.46
BRAT1-204ENST00000469750 C9orf47Q6ZRZ4 202 aa12.17□□□□□ -0.46
BRAT1-204ENST00000469750 SH2D6Q7Z4S9 175 aa12.17□□□□□ -0.46
BRAT1-204ENST00000469750 C5orf38Q86SI9 138 aa12.17□□□□□ -0.46
BRAT1-204ENST00000469750 KMT2EQ8IZD2 1858 aa12.17□□□□□ -0.46
BRAT1-204ENST00000469750 HERV-K104P63124 156 aa12.16□□□□□ -0.46
BRAT1-204ENST00000469750 E7EUB6 86 aa12.16□□□□□ -0.46
BRAT1-204ENST00000469750 DAZ2Q13117 558 aaKnown RBP12.16□□□□□ -0.46
BRAT1-204ENST00000469750 DAZ4Q86SG3 579 aaKnown RBP12.16□□□□□ -0.46
BRAT1-204ENST00000469750 DAZ3Q9NR90 486 aaKnown RBP12.16□□□□□ -0.46
BRAT1-204ENST00000469750 PLCE1Q9P212 2302 aa12.16□□□□□ -0.46
BRAT1-204ENST00000469750 DSCR8Q96T75 97 aa12.15□□□□□ -0.46
BRAT1-204ENST00000469750 PLA2G2EQ9NZK7 142 aa12.15□□□□□ -0.46
BRAT1-204ENST00000469750 ZFP2Q6ZN57 461 aa12.15□□□□□ -0.46
BRAT1-204ENST00000469750 Q8N1Y9 231 aa12.15□□□□□ -0.46
BRAT1-204ENST00000469750 UBE2BP63146 152 aa12.15□□□□□ -0.46
BRAT1-204ENST00000469750 MRPL36Q9P0J6 103 aaKnown RBP12.15□□□□□ -0.46
BRAT1-204ENST00000469750 C4orf3Q8WVX3 66 aa12.15□□□□□ -0.46
BRAT1-204ENST00000469750 COL4A3Q01955 1670 aa12.15□□□□□ -0.47
BRAT1-204ENST00000469750 HAMPP81172 84 aa12.14□□□□□ -0.47
BRAT1-204ENST00000469750 CLPSL1A2RUU4 121 aa12.14□□□□□ -0.47
BRAT1-204ENST00000469750 A6NDX4 124 aa12.14□□□□□ -0.47
BRAT1-204ENST00000469750 LTBP2Q14767 1821 aa12.14□□□□□ -0.47
BRAT1-204ENST00000469750 CCL18P55774 89 aa12.14□□□□□ -0.47
BRAT1-204ENST00000469750 HIVEP2P31629 2446 aa12.13□□□□□ -0.47
BRAT1-204ENST00000469750 IGLL5B9A064 214 aa12.13□□□□□ -0.47
BRAT1-204ENST00000469750 PCP2Q8IVA1 136 aa12.13□□□□□ -0.47
BRAT1-204ENST00000469750 CACNA1AO00555 2505 aa12.13□□□□□ -0.47
BRAT1-204ENST00000469750 ADAMTS9Q9P2N4 1935 aa12.13□□□□□ -0.47
BRAT1-204ENST00000469750 FREM1Q5H8C1 2179 aa12.13□□□□□ -0.47
BRAT1-204ENST00000469750 CFC1BP0CG36 223 aa12.13□□□□□ -0.47
BRAT1-204ENST00000469750 CFC1P0CG37 223 aa12.13□□□□□ -0.47
BRAT1-204ENST00000469750 FANCD2OSQ96PS1 177 aa12.13□□□□□ -0.47
BRAT1-204ENST00000469750 ATOX1O00244 68 aa12.12□□□□□ -0.47
BRAT1-204ENST00000469750 LOXL1Q08397 574 aaPredicted RBP12.12□□□□□ -0.47
BRAT1-204ENST00000469750 PRORYQ9H606 182 aa12.12□□□□□ -0.47
BRAT1-204ENST00000469750 GTSF1Q8WW33 167 aa12.12□□□□□ -0.47
BRAT1-204ENST00000469750 A0A0J9YXV3 536 aa12.11□□□□□ -0.47
BRAT1-204ENST00000469750 MED14OSP0DP75 135 aa12.11□□□□□ -0.47
BRAT1-204ENST00000469750 TAX1BP3O14907 124 aa12.11□□□□□ -0.47
BRAT1-204ENST00000469750 CAMK2N2Q96S95 79 aa12.11□□□□□ -0.47
BRAT1-204ENST00000469750 PKIGQ9Y2B9 76 aa12.11□□□□□ -0.47
BRAT1-204ENST00000469750 TRAV4A0A0B4J268 109 aa12.11□□□□□ -0.47
BRAT1-204ENST00000469750 TNFRSF13BO14836 293 aaPredicted RBP12.11□□□□□ -0.47
BRAT1-204ENST00000469750 LMO4P61968 165 aa12.11□□□□□ -0.47
BRAT1-204ENST00000469750 CSPG4Q6UVK1 2322 aa12.11□□□□□ -0.47
BRAT1-204ENST00000469750 ZNF503Q96F45 646 aa12.11□□□□□ -0.47
BRAT1-204ENST00000469750 IGLV10-54A0A075B6I4 117 aa12.1□□□□□ -0.47
BRAT1-204ENST00000469750 COX7A2LO14548 114 aa12.1□□□□□ -0.47
BRAT1-204ENST00000469750 OTOGLQ3ZCN5 2332 aa12.1□□□□□ -0.47
BRAT1-204ENST00000469750 UNQ9165/PRO28630Q6UXU0 137 aa12.1□□□□□ -0.47
BRAT1-204ENST00000469750 PRO3102Q9H379 93 aa12.1□□□□□ -0.47
BRAT1-204ENST00000469750 IGHV3-30P01768 117 aa12.1□□□□□ -0.47
BRAT1-204ENST00000469750 IGHV3-33P01772 117 aa12.1□□□□□ -0.47
BRAT1-204ENST00000469750 IGHV3-30-3P0DP02 117 aa12.1□□□□□ -0.47
BRAT1-204ENST00000469750 IGHV3-30-5P0DP03 117 aa12.1□□□□□ -0.47
BRAT1-204ENST00000469750 C5orf47Q569G3 176 aa12.1□□□□□ -0.47
BRAT1-204ENST00000469750 ESM1Q9NQ30 184 aa12.1□□□□□ -0.47
BRAT1-204ENST00000469750 TRBV7-3A0A075B6L6 115 aa12.09□□□□□ -0.47
BRAT1-204ENST00000469750 TEN1Q86WV5 123 aa12.09□□□□□ -0.47
BRAT1-204ENST00000469750 TRBV12-3P01733 135 aa12.09□□□□□ -0.47
BRAT1-204ENST00000469750 TMEM61Q8N0U2 210 aa12.09□□□□□ -0.47
BRAT1-204ENST00000469750 TRBV6-1A0A0K0K1D8 114 aa12.09□□□□□ -0.47
BRAT1-204ENST00000469750 ODF3BA8MYP8 253 aa12.09□□□□□ -0.47
BRAT1-204ENST00000469750 LINC00574Q9H8X3 128 aa12.09□□□□□ -0.47
BRAT1-204ENST00000469750 HHLA3Q9XRX5 114 aa12.08□□□□□ -0.48
BRAT1-204ENST00000469750 CTRLP40313 264 aa12.08□□□□□ -0.48
BRAT1-204ENST00000469750 DEFB1P60022 68 aa12.08□□□□□ -0.48
BRAT1-204ENST00000469750 FOXI1Q12951 378 aa12.08□□□□□ -0.48
BRAT1-204ENST00000469750 TINCRA0A1B0GVN0 87 aa12.08□□□□□ -0.48
BRAT1-204ENST00000469750 RPL18AQ02543 176 aaKnown RBP12.08□□□□□ -0.48
BRAT1-204ENST00000469750 DEFB135Q30KP9 77 aa12.08□□□□□ -0.48
BRAT1-204ENST00000469750 LINC01545Q5VT33 79 aa12.08□□□□□ -0.48
BRAT1-204ENST00000469750 ATRXP46100 2492 aa12.08□□□□□ -0.48
BRAT1-204ENST00000469750 DNAJC9-AS1A6NH13 148 aa12.07□□□□□ -0.48
BRAT1-204ENST00000469750 TDRG1Q3Y452 100 aa12.07□□□□□ -0.48
BRAT1-204ENST00000469750 FAM236AA0A1B0GUQ0 79 aa12.07□□□□□ -0.48
BRAT1-204ENST00000469750 FAM236BA0A1B0GV22 79 aa12.07□□□□□ -0.48
BRAT1-204ENST00000469750 LINC00173Q6ZV60 143 aa12.07□□□□□ -0.48
BRAT1-204ENST00000469750 A0A0J9YX75 114 aa12.07□□□□□ -0.48
BRAT1-204ENST00000469750 C19orf84I3L1E1 186 aa12.07□□□□□ -0.48
BRAT1-204ENST00000469750 LRRC75A-AS1Q8N1F1 130 aa12.07□□□□□ -0.48
BRAT1-204ENST00000469750 INSL3P51460 131 aa12.07□□□□□ -0.48
BRAT1-204ENST00000469750 WFDC2Q14508 124 aa12.06□□□□□ -0.48
BRAT1-204ENST00000469750 P0C879 139 aa12.06□□□□□ -0.48
BRAT1-204ENST00000469750 TNCP24821 2201 aa12.06□□□□□ -0.48
BRAT1-204ENST00000469750 NUPR1O60356 82 aa12.06□□□□□ -0.48
BRAT1-204ENST00000469750 RPL39P62891 51 aaKnown RBP12.06□□□□□ -0.48
BRAT1-204ENST00000469750 HIST2H2BCQ6DN03 193 aa12.06□□□□□ -0.48
BRAT1-204ENST00000469750 C11orf1Q9H5F2 150 aa12.06□□□□□ -0.48
BRAT1-204ENST00000469750 ORMDL1Q9P0S3 153 aa12.06□□□□□ -0.48
BRAT1-204ENST00000469750 COX7B2Q8TF08 81 aa12.05□□□□□ -0.48
BRAT1-204ENST00000469750 ETDCA0A1B0GVM5 59 aa12.05□□□□□ -0.48
BRAT1-204ENST00000469750 SMAD5-AS1Q9Y6J3 95 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms