RNA–Protein interactions for RNA: ENST00000469558.1

MCF2L-222, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-222ENST00000469558 Q6ZRN7 208 aaPredicted RBP7.93□□□□□ -1.14
MCF2L-222ENST00000469558 ZFP82Q8N141 532 aa7.93□□□□□ -1.14
MCF2L-222ENST00000469558 C6orf223Q8N319 242 aa7.93□□□□□ -1.14
MCF2L-222ENST00000469558 PCNPQ8WW12 178 aaKnown RBP7.93□□□□□ -1.14
MCF2L-222ENST00000469558 PHLDA3Q9Y5J5 127 aa7.93□□□□□ -1.14
MCF2L-222ENST00000469558 TMEM250H0YL14 139 aa7.92□□□□□ -1.14
MCF2L-222ENST00000469558 SIVA1O15304 175 aa7.92□□□□□ -1.14
MCF2L-222ENST00000469558 TNP2Q05952 138 aa7.92□□□□□ -1.14
MCF2L-222ENST00000469558 TOR2AQ5JU69 321 aa7.92□□□□□ -1.14
MCF2L-222ENST00000469558 SYT8Q8NBV8 401 aa7.92□□□□□ -1.14
MCF2L-222ENST00000469558 KIF25-AS1Q9Y6Z4 181 aa7.92□□□□□ -1.14
MCF2L-222ENST00000469558 HERC2O95714 4834 aa7.91□□□□□ -1.14
MCF2L-222ENST00000469558 RHODO00212 210 aa7.91□□□□□ -1.14
MCF2L-222ENST00000469558 DNAH10OSP0CZ25 163 aa7.91□□□□□ -1.14
MCF2L-222ENST00000469558 LINC00315P59091 139 aa7.91□□□□□ -1.14
MCF2L-222ENST00000469558 TTC32Q5I0X7 151 aa7.91□□□□□ -1.14
MCF2L-222ENST00000469558 FAM74A4Q5TZK3 123 aa7.91□□□□□ -1.14
MCF2L-222ENST00000469558 TEX261Q6UWH6 196 aa7.91□□□□□ -1.14
MCF2L-222ENST00000469558 OCC1Q8TAD7 63 aa7.91□□□□□ -1.14
MCF2L-222ENST00000469558 FAM210AQ96ND0 272 aa7.91□□□□□ -1.14
MCF2L-222ENST00000469558 PRADC1Q9BSG0 188 aa7.91□□□□□ -1.14
MCF2L-222ENST00000469558 C9JQL5 133 aa7.9□□□□□ -1.14
MCF2L-222ENST00000469558 SH2D6Q7Z4S9 175 aa7.9□□□□□ -1.14
MCF2L-222ENST00000469558 NUDT10Q8NFP7 164 aa7.9□□□□□ -1.14
MCF2L-222ENST00000469558 OR2D3Q8NGH3 330 aa7.9□□□□□ -1.14
MCF2L-222ENST00000469558 NUDT11Q96G61 164 aa7.9□□□□□ -1.14
MCF2L-222ENST00000469558 RNASE7Q9H1E1 156 aaKnown RBP7.9□□□□□ -1.14
MCF2L-222ENST00000469558 TNFRSF18Q9Y5U5 241 aa7.9□□□□□ -1.14
MCF2L-222ENST00000469558 GAGE12JA6NER3 117 aa7.89□□□□□ -1.15
MCF2L-222ENST00000469558 NDUFS6O75380 124 aaKnown RBP7.89□□□□□ -1.15
MCF2L-222ENST00000469558 SRP19P09132 144 aaKnown RBP7.89□□□□□ -1.15
MCF2L-222ENST00000469558 GAGE1Q13065 139 aa7.89□□□□□ -1.15
MCF2L-222ENST00000469558 GAGE4Q13068 117 aa7.89□□□□□ -1.15
MCF2L-222ENST00000469558 GAGE5Q13069 117 aa7.89□□□□□ -1.15
MCF2L-222ENST00000469558 GAGE13Q4V321 117 aa7.89□□□□□ -1.15
MCF2L-222ENST00000469558 Q8N3U1 123 aa7.89□□□□□ -1.15
MCF2L-222ENST00000469558 MSRB1Q9NZV6 116 aa7.89□□□□□ -1.15
MCF2L-222ENST00000469558 P01737 135 aa7.88□□□□□ -1.15
MCF2L-222ENST00000469558 CTRLP40313 264 aa7.88□□□□□ -1.15
MCF2L-222ENST00000469558 SRSF3P84103 164 aaKnown RBP7.88□□□□□ -1.15
MCF2L-222ENST00000469558 SOHLH1Q5JUK2 328 aa7.88□□□□□ -1.15
MCF2L-222ENST00000469558 LELP1Q5T871 98 aa7.88□□□□□ -1.15
MCF2L-222ENST00000469558 FER1L6-AS1Q8NA97 138 aa7.88□□□□□ -1.15
MCF2L-222ENST00000469558 ATP6V0E2Q8NHE4 81 aa7.88□□□□□ -1.15
MCF2L-222ENST00000469558 GTSF1LQ9H1H1 148 aa7.88□□□□□ -1.15
MCF2L-222ENST00000469558 DNAH5Q8TE73 4624 aa7.88□□□□□ -1.15
MCF2L-222ENST00000469558 BTF3P20290 206 aaKnown RBP7.87□□□□□ -1.15
MCF2L-222ENST00000469558 RPS20P60866 119 aaKnown RBP7.87□□□□□ -1.15
MCF2L-222ENST00000469558 SSTP61278 116 aa7.87□□□□□ -1.15
MCF2L-222ENST00000469558 LINC01556Q5JQF7 62 aa7.87□□□□□ -1.15
MCF2L-222ENST00000469558 SPANXN1Q5VSR9 72 aa7.87□□□□□ -1.15
MCF2L-222ENST00000469558 OR10G8Q8NGN5 311 aa7.87□□□□□ -1.15
MCF2L-222ENST00000469558 GTSF1Q8WW33 167 aa7.87□□□□□ -1.15
MCF2L-222ENST00000469558 DAZAP1Q96EP5 407 aaKnown RBP7.87□□□□□ -1.15
MCF2L-222ENST00000469558 CNFNQ9BYD5 112 aa7.87□□□□□ -1.15
MCF2L-222ENST00000469558 LY96Q9Y6Y9 160 aa7.87□□□□□ -1.15
MCF2L-222ENST00000469558 LRP1BQ9NZR2 4599 aa7.86□□□□□ -1.15
MCF2L-222ENST00000469558 IGHV3-38A0A0C4DH36 116 aa7.86□□□□□ -1.15
MCF2L-222ENST00000469558 TRBV10-1A0A0K0K1A3 114 aa7.86□□□□□ -1.15
MCF2L-222ENST00000469558 RAB4BP61018 213 aa7.86□□□□□ -1.15
MCF2L-222ENST00000469558 UBE2D3P61077 147 aa7.86□□□□□ -1.15
MCF2L-222ENST00000469558 UBE2D2P62837 147 aa7.86□□□□□ -1.15
MCF2L-222ENST00000469558 LYZL1Q6UWQ5 148 aa7.86□□□□□ -1.15
MCF2L-222ENST00000469558 FAM231DQ6ZW35 169 aa7.86□□□□□ -1.15
MCF2L-222ENST00000469558 LINC01551Q86U37 167 aa7.86□□□□□ -1.15
MCF2L-222ENST00000469558 NEXN-AS1Q8NBZ9 246 aa7.86□□□□□ -1.15
MCF2L-222ENST00000469558 TPPP3Q9BW30 176 aa7.86□□□□□ -1.15
MCF2L-222ENST00000469558 EIF5A2Q9GZV4 153 aaKnown RBP7.86□□□□□ -1.15
MCF2L-222ENST00000469558 RPP21Q9H633 154 aaKnown RBP7.86□□□□□ -1.15
MCF2L-222ENST00000469558 RYR1P21817 5038 aa7.85□□□□□ -1.15
MCF2L-222ENST00000469558 CEBPGP53567 150 aa7.85□□□□□ -1.15
MCF2L-222ENST00000469558 AP1S3Q96PC3 154 aa7.85□□□□□ -1.15
MCF2L-222ENST00000469558 SMIM7Q9BQ49 75 aa7.85□□□□□ -1.15
MCF2L-222ENST00000469558 BIN3Q9NQY0 253 aa7.85□□□□□ -1.15
MCF2L-222ENST00000469558 EVI2AP22794 236 aa7.84□□□□□ -1.15
MCF2L-222ENST00000469558 ZNF56Q15929 161 aa7.84□□□□□ -1.15
MCF2L-222ENST00000469558 TRBV7-3A0A075B6L6 115 aa7.83□□□□□ -1.16
MCF2L-222ENST00000469558 F2Z2F3 143 aa7.83□□□□□ -1.16
MCF2L-222ENST00000469558 K7EP13 123 aa7.83□□□□□ -1.16
MCF2L-222ENST00000469558 M0QY20 66 aa7.83□□□□□ -1.16
MCF2L-222ENST00000469558 CACNG7P62955 275 aa7.83□□□□□ -1.16
MCF2L-222ENST00000469558 OR10J3Q5JRS4 329 aa7.83□□□□□ -1.16
MCF2L-222ENST00000469558 WDR73Q6P4I2 378 aa7.83□□□□□ -1.16
MCF2L-222ENST00000469558 TRAV8-6A0A0B4J262 113 aa7.82□□□□□ -1.16
MCF2L-222ENST00000469558 XKRY2A2RUG3 117 aa7.82□□□□□ -1.16
MCF2L-222ENST00000469558 ZNF727A8MUV8 499 aa7.82□□□□□ -1.16
MCF2L-222ENST00000469558 IBA57-AS1B1ANH7 110 aa7.82□□□□□ -1.16
MCF2L-222ENST00000469558 IGHV3-30P01768 117 aa7.82□□□□□ -1.16
MCF2L-222ENST00000469558 IGHV3-33P01772 117 aa7.82□□□□□ -1.16
MCF2L-222ENST00000469558 IGHV3-30-3P0DP02 117 aa7.82□□□□□ -1.16
MCF2L-222ENST00000469558 IGHV3-30-5P0DP03 117 aa7.82□□□□□ -1.16
MCF2L-222ENST00000469558 NTF3P20783 257 aa7.82□□□□□ -1.16
MCF2L-222ENST00000469558 FOXA3P55318 350 aaPredicted RBP7.82□□□□□ -1.16
MCF2L-222ENST00000469558 KRTAP10-2P60368 255 aa7.82□□□□□ -1.16
MCF2L-222ENST00000469558 CT83Q5H943 113 aa7.82□□□□□ -1.16
MCF2L-222ENST00000469558 SUMO4Q6EEV6 95 aa7.82□□□□□ -1.16
MCF2L-222ENST00000469558 GATCO43716 136 aaKnown RBP7.81□□□□□ -1.16
MCF2L-222ENST00000469558 RPL36AP83881 106 aaKnown RBP7.81□□□□□ -1.16
MCF2L-222ENST00000469558 NTM-AS1Q6ZSK4 140 aa7.81□□□□□ -1.16
MCF2L-222ENST00000469558 NIT1Q86X76 327 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms