RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 PRO3102Q9H379 93 aa6.78□□□□□ -1.32
SMARCE1-207ENST00000469334 S4R3C0 116 aa6.78□□□□□ -1.32
SMARCE1-207ENST00000469334 ABCA1O95477 2261 aa6.78□□□□□ -1.32
SMARCE1-207ENST00000469334 TRAV8-3A0A0A6YYJ7 113 aa6.77□□□□□ -1.33
SMARCE1-207ENST00000469334 TRBV6-5A0A0K0K1A5 114 aa6.77□□□□□ -1.33
SMARCE1-207ENST00000469334 TRBV27A0A0K0K1C4 114 aa6.77□□□□□ -1.33
SMARCE1-207ENST00000469334 FAM222AQ5U5X8 452 aa6.77□□□□□ -1.33
SMARCE1-207ENST00000469334 LYPD2Q6UXB3 125 aa6.77□□□□□ -1.33
SMARCE1-207ENST00000469334 SERP2Q8N6R1 65 aa6.77□□□□□ -1.33
SMARCE1-207ENST00000469334 ZGRF1Q86YA3 2104 aa6.77□□□□□ -1.33
SMARCE1-207ENST00000469334 MED13Q9UHV7 2174 aa6.77□□□□□ -1.33
SMARCE1-207ENST00000469334 TRBV7-1A0A0A6YYK4 115 aa6.77□□□□□ -1.33
SMARCE1-207ENST00000469334 NDUFC2-KCTD14E9PQ53 114 aa6.77□□□□□ -1.33
SMARCE1-207ENST00000469334 LY6LH3BQJ8 138 aa6.77□□□□□ -1.33
SMARCE1-207ENST00000469334 RPL39P62891 51 aaKnown RBP6.77□□□□□ -1.33
SMARCE1-207ENST00000469334 Q5XG85 94 aa6.77□□□□□ -1.33
SMARCE1-207ENST00000469334 SDK1Q7Z5N4 2213 aa6.77□□□□□ -1.33
SMARCE1-207ENST00000469334 LINC00477Q96M19 166 aa6.76□□□□□ -1.33
SMARCE1-207ENST00000469334 SIT1Q9Y3P8 196 aa6.76□□□□□ -1.33
SMARCE1-207ENST00000469334 PKD1L2Q7Z442 2459 aa6.76□□□□□ -1.33
SMARCE1-207ENST00000469334 MBD3L4A6NDZ8 208 aaPredicted RBP6.76□□□□□ -1.33
SMARCE1-207ENST00000469334 MBD3L3A6NE82 208 aaPredicted RBP6.76□□□□□ -1.33
SMARCE1-207ENST00000469334 MBD3L5A6NJ08 208 aaPredicted RBP6.76□□□□□ -1.33
SMARCE1-207ENST00000469334 B9A039 149 aa6.76□□□□□ -1.33
SMARCE1-207ENST00000469334 K7ENP7 123 aa6.76□□□□□ -1.33
SMARCE1-207ENST00000469334 COX7A2LO14548 114 aa6.76□□□□□ -1.33
SMARCE1-207ENST00000469334 IGHV3-30-3P0DP02 117 aa6.76□□□□□ -1.33
SMARCE1-207ENST00000469334 MBD3L2Q8NHZ7 208 aaPredicted RBP6.76□□□□□ -1.33
SMARCE1-207ENST00000469334 EEF1AKMT3Q96AZ1 226 aa6.76□□□□□ -1.33
SMARCE1-207ENST00000469334 UPK3BQ9BT76 320 aa6.76□□□□□ -1.33
SMARCE1-207ENST00000469334 KIF25-AS1Q9Y6Z4 181 aa6.76□□□□□ -1.33
SMARCE1-207ENST00000469334 TRAV41A0A0B4J266 112 aa6.75□□□□□ -1.33
SMARCE1-207ENST00000469334 MALP21145 153 aa6.75□□□□□ -1.33
SMARCE1-207ENST00000469334 LINC00315P59091 139 aa6.75□□□□□ -1.33
SMARCE1-207ENST00000469334 C9orf139Q6ZV77 190 aa6.75□□□□□ -1.33
SMARCE1-207ENST00000469334 REV3LO60673 3130 aa6.75□□□□□ -1.33
SMARCE1-207ENST00000469334 TRAV13-1A0A0B4J241 112 aa6.74□□□□□ -1.33
SMARCE1-207ENST00000469334 F8WDY8 70 aa6.74□□□□□ -1.33
SMARCE1-207ENST00000469334 PRSS2P07478 247 aa6.74□□□□□ -1.33
SMARCE1-207ENST00000469334 RNASE4P34096 147 aaKnown RBP6.74□□□□□ -1.33
SMARCE1-207ENST00000469334 PRR9Q5T870 116 aa6.74□□□□□ -1.33
SMARCE1-207ENST00000469334 TTC28Q96AY4 2481 aa6.74□□□□□ -1.33
SMARCE1-207ENST00000469334 SPRY2O43597 315 aa6.74□□□□□ -1.33
SMARCE1-207ENST00000469334 C4orf26Q17RF5 130 aa6.74□□□□□ -1.33
SMARCE1-207ENST00000469334 SUMO4Q6EEV6 95 aa6.74□□□□□ -1.33
SMARCE1-207ENST00000469334 Q6JHZ5 121 aa6.74□□□□□ -1.33
SMARCE1-207ENST00000469334 HRCT1Q6UXD1 115 aa6.74□□□□□ -1.33
SMARCE1-207ENST00000469334 ZFAND2AQ8N6M9 145 aa6.74□□□□□ -1.33
SMARCE1-207ENST00000469334 PRO0628Q9UI54 55 aa6.74□□□□□ -1.33
SMARCE1-207ENST00000469334 ZNF415Q09FC8 603 aa6.73□□□□□ -1.33
SMARCE1-207ENST00000469334 DAZ2Q13117 558 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-207ENST00000469334 KLK9Q2XQG4 91 aa6.73□□□□□ -1.33
SMARCE1-207ENST00000469334 DAZ4Q86SG3 579 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-207ENST00000469334 APRG1Q8IVJ8 170 aa6.73□□□□□ -1.33
SMARCE1-207ENST00000469334 JPT2Q9H910 190 aa6.73□□□□□ -1.33
SMARCE1-207ENST00000469334 DAZ1Q9NQZ3 744 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-207ENST00000469334 DAZ3Q9NR90 486 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-207ENST00000469334 KLK9Q9UKQ9 250 aa6.73□□□□□ -1.33
SMARCE1-207ENST00000469334 ARHGAP32A7KAX9 2087 aa6.73□□□□□ -1.33
SMARCE1-207ENST00000469334 IGHV1-58A0A0C4DH39 117 aa6.73□□□□□ -1.33
SMARCE1-207ENST00000469334 OXTP01178 125 aa6.73□□□□□ -1.33
SMARCE1-207ENST00000469334 RNASE3P12724 160 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-207ENST00000469334 COPS9Q8WXC6 57 aa6.73□□□□□ -1.33
SMARCE1-207ENST00000469334 NDUFA12Q9UI09 145 aa6.73□□□□□ -1.33
SMARCE1-207ENST00000469334 CADP27708 2225 aa6.72□□□□□ -1.33
SMARCE1-207ENST00000469334 IGHV3-64A0A075B6Q5 118 aa6.72□□□□□ -1.33
SMARCE1-207ENST00000469334 NDUFC2O95298 119 aa6.72□□□□□ -1.33
SMARCE1-207ENST00000469334 IGHV3-23P01764 117 aa6.72□□□□□ -1.33
SMARCE1-207ENST00000469334 MRPS36P82909 103 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-207ENST00000469334 ITLN2Q8WWU7 325 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1-207ENST00000469334 FAM19A4Q96LR4 140 aa6.72□□□□□ -1.33
SMARCE1-207ENST00000469334 PYGO1Q9Y3Y4 419 aa6.72□□□□□ -1.33
SMARCE1-207ENST00000469334 A0A0J9YXV3 536 aa6.71□□□□□ -1.33
SMARCE1-207ENST00000469334 CLPSL1A2RUU4 121 aa6.71□□□□□ -1.33
SMARCE1-207ENST00000469334 COX7A1P24310 79 aa6.71□□□□□ -1.33
SMARCE1-207ENST00000469334 TIRAPP58753 221 aa6.71□□□□□ -1.33
SMARCE1-207ENST00000469334 ADAMTSL4-AS1Q5T5F5 129 aa6.71□□□□□ -1.33
SMARCE1-207ENST00000469334 C20orf203Q8NBC4 194 aa6.71□□□□□ -1.33
SMARCE1-207ENST00000469334 CCL17Q92583 94 aa6.71□□□□□ -1.33
SMARCE1-207ENST00000469334 DSCR8Q96T75 97 aa6.71□□□□□ -1.33
SMARCE1-207ENST00000469334 U3KQE9 123 aa6.71□□□□□ -1.33
SMARCE1-207ENST00000469334 ZNF318Q5VUA4 2279 aa6.71□□□□□ -1.33
SMARCE1-207ENST00000469334 PRRC2AP48634 2157 aaKnown RBP6.71□□□□□ -1.34
SMARCE1-207ENST00000469334 IGLV4-3A0A075B6K6 122 aa6.71□□□□□ -1.34
SMARCE1-207ENST00000469334 MAFAQ8NHW3 353 aaPredicted RBP6.71□□□□□ -1.34
SMARCE1-207ENST00000469334 C16orf92Q96LL3 132 aa6.71□□□□□ -1.34
SMARCE1-207ENST00000469334 CYSTM1Q9H1C7 97 aa6.71□□□□□ -1.34
SMARCE1-207ENST00000469334 ZNF576Q9H609 170 aa6.71□□□□□ -1.34
SMARCE1-207ENST00000469334 DPM3Q9P2X0 92 aa6.71□□□□□ -1.34
SMARCE1-207ENST00000469334 BAALC-AS2P0C853 105 aa6.7□□□□□ -1.34
SMARCE1-207ENST00000469334 SYNJ2BPP57105 145 aa6.7□□□□□ -1.34
SMARCE1-207ENST00000469334 BEAN1Q3B7T3 259 aa6.7□□□□□ -1.34
SMARCE1-207ENST00000469334 TMEM105Q8N8V8 129 aa6.7□□□□□ -1.34
SMARCE1-207ENST00000469334 IGHV3OR16-10A0A075B7F0 116 aa6.7□□□□□ -1.34
SMARCE1-207ENST00000469334 NDPQ00604 133 aa6.7□□□□□ -1.34
SMARCE1-207ENST00000469334 SEM1Q6ZVN7 128 aa6.7□□□□□ -1.34
SMARCE1-207ENST00000469334 VMO1Q7Z5L0 202 aa6.7□□□□□ -1.34
SMARCE1-207ENST00000469334 FAM110DQ8TAY7 271 aaPredicted RBP6.7□□□□□ -1.34
SMARCE1-207ENST00000469334 VSIG2Q96IQ7 327 aa6.7□□□□□ -1.34
SMARCE1-207ENST00000469334 OVOL2Q9BRP0 275 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms