RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 ZNF56Q15929 161 aa5.81□□□□□ -1.48
HDAC6-216ENST00000468949 PIK3CD-AS1Q5SR53 167 aa5.81□□□□□ -1.48
HDAC6-216ENST00000468949 MRPL54Q6P161 138 aaKnown RBP5.81□□□□□ -1.48
HDAC6-216ENST00000468949 NUP35Q8NFH5 326 aa5.81□□□□□ -1.48
HDAC6-216ENST00000468949 SCRT2Q9NQ03 307 aa5.81□□□□□ -1.48
HDAC6-216ENST00000468949 SMCO4Q9NRQ5 59 aa5.81□□□□□ -1.48
HDAC6-216ENST00000468949 CELA1Q9UNI1 258 aa5.81□□□□□ -1.48
HDAC6-216ENST00000468949 TRAV9-1A0A075B6T8 112 aa5.8□□□□□ -1.48
HDAC6-216ENST00000468949 TRAV4A0A0B4J268 109 aa5.8□□□□□ -1.48
HDAC6-216ENST00000468949 TRGV4A0A0C4DH28 118 aa5.8□□□□□ -1.48
HDAC6-216ENST00000468949 IGHV3-53P01767 116 aa5.8□□□□□ -1.48
HDAC6-216ENST00000468949 ATP5G1P05496 136 aa5.8□□□□□ -1.48
HDAC6-216ENST00000468949 NTF3P20783 257 aa5.8□□□□□ -1.48
HDAC6-216ENST00000468949 CAMPP49913 170 aa5.8□□□□□ -1.48
HDAC6-216ENST00000468949 WDR73Q6P4I2 378 aa5.8□□□□□ -1.48
HDAC6-216ENST00000468949 ATP5L2Q7Z4Y8 100 aa5.8□□□□□ -1.48
HDAC6-216ENST00000468949 RASL10AQ92737 203 aa5.8□□□□□ -1.48
HDAC6-216ENST00000468949 PTH2Q96A98 100 aa5.8□□□□□ -1.48
HDAC6-216ENST00000468949 A0A087WWL8 130 aa5.79□□□□□ -1.48
HDAC6-216ENST00000468949 LOC105371267A0A1B0GV96 52 aa5.79□□□□□ -1.48
HDAC6-216ENST00000468949 F5H697 171 aa5.79□□□□□ -1.48
HDAC6-216ENST00000468949 F5H768 121 aa5.79□□□□□ -1.48
HDAC6-216ENST00000468949 CIDEAO60543 219 aa5.79□□□□□ -1.48
HDAC6-216ENST00000468949 NXPH4O95158 308 aa5.79□□□□□ -1.48
HDAC6-216ENST00000468949 FOXA3P55318 350 aaPredicted RBP5.79□□□□□ -1.48
HDAC6-216ENST00000468949 NANOS2P60321 138 aaKnown RBP5.79□□□□□ -1.48
HDAC6-216ENST00000468949 TMEM88Q6PEY1 159 aa5.79□□□□□ -1.48
HDAC6-216ENST00000468949 C14orf178Q8N769 122 aaPredicted RBP5.79□□□□□ -1.48
HDAC6-216ENST00000468949 CNFNQ9BYD5 112 aa5.79□□□□□ -1.48
HDAC6-216ENST00000468949 DPH3P1Q9H4G8 78 aa5.79□□□□□ -1.48
HDAC6-216ENST00000468949 IGHV4-4A0A075B6R2 117 aa5.78□□□□□ -1.48
HDAC6-216ENST00000468949 IGHV3-73A0A0B4J1V6 119 aa5.78□□□□□ -1.48
HDAC6-216ENST00000468949 TRAV10A0A0B4J240 114 aa5.78□□□□□ -1.48
HDAC6-216ENST00000468949 C3orf84H3BNL1 204 aa5.78□□□□□ -1.48
HDAC6-216ENST00000468949 COX19Q49B96 90 aa5.78□□□□□ -1.48
HDAC6-216ENST00000468949 CFAP126Q5VTH2 177 aa5.78□□□□□ -1.48
HDAC6-216ENST00000468949 ATRAIDQ6UW56 229 aa5.78□□□□□ -1.48
HDAC6-216ENST00000468949 Q6ZTC4 211 aa5.78□□□□□ -1.48
HDAC6-216ENST00000468949 CBLN2Q8IUK8 224 aa5.78□□□□□ -1.48
HDAC6-216ENST00000468949 MUC7Q8TAX7 377 aa5.78□□□□□ -1.48
HDAC6-216ENST00000468949 DEFB131BA0A096LNP1 70 aa5.77□□□□□ -1.49
HDAC6-216ENST00000468949 H7C1H1 209 aa5.77□□□□□ -1.49
HDAC6-216ENST00000468949 RS1O15537 224 aa5.77□□□□□ -1.49
HDAC6-216ENST00000468949 EVI2AP22794 236 aa5.77□□□□□ -1.49
HDAC6-216ENST00000468949 SLAQ13239 276 aa5.77□□□□□ -1.49
HDAC6-216ENST00000468949 C12orf74Q32Q52 190 aa5.77□□□□□ -1.49
HDAC6-216ENST00000468949 RASL11AQ6T310 242 aa5.77□□□□□ -1.49
HDAC6-216ENST00000468949 ZFP2Q6ZN57 461 aa5.77□□□□□ -1.49
HDAC6-216ENST00000468949 LINC00612Q8N6U2 182 aa5.77□□□□□ -1.49
HDAC6-216ENST00000468949 FAM210BQ96KR6 192 aa5.77□□□□□ -1.49
HDAC6-216ENST00000468949 C18orf15Q96N68 181 aa5.77□□□□□ -1.49
HDAC6-216ENST00000468949 PRADC1Q9BSG0 188 aa5.77□□□□□ -1.49
HDAC6-216ENST00000468949 MSRB1Q9NZV6 116 aa5.77□□□□□ -1.49
HDAC6-216ENST00000468949 STAB2Q8WWQ8 2551 aa5.76□□□□□ -1.49
HDAC6-216ENST00000468949 TGIF2-C20orf24A0A0A6YYL0 155 aa5.76□□□□□ -1.49
HDAC6-216ENST00000468949 NUPR2A6NF83 97 aa5.76□□□□□ -1.49
HDAC6-216ENST00000468949 K7EQD1 137 aa5.76□□□□□ -1.49
HDAC6-216ENST00000468949 HLA-DQA1P01909 254 aa5.76□□□□□ -1.49
HDAC6-216ENST00000468949 MT-ND6P03923 174 aa5.76□□□□□ -1.49
HDAC6-216ENST00000468949 RHOHQ15669 191 aa5.76□□□□□ -1.49
HDAC6-216ENST00000468949 ZNF575Q86XF7 245 aa5.76□□□□□ -1.49
HDAC6-216ENST00000468949 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.76□□□□□ -1.49
HDAC6-216ENST00000468949 FRZBQ92765 325 aa5.76□□□□□ -1.49
HDAC6-216ENST00000468949 ZNF479Q96JC4 524 aa5.76□□□□□ -1.49
HDAC6-216ENST00000468949 TMEM191AQ9H0A3 160 aa5.76□□□□□ -1.49
HDAC6-216ENST00000468949 JPT2Q9H910 190 aa5.76□□□□□ -1.49
HDAC6-216ENST00000468949 EDA2RQ9HAV5 297 aa5.76□□□□□ -1.49
HDAC6-216ENST00000468949 NBEAL2Q6ZNJ1 2754 aa5.76□□□□□ -1.49
HDAC6-216ENST00000468949 KMT2CQ8NEZ4 4911 aaKnown RBP5.75□□□□□ -1.49
HDAC6-216ENST00000468949 TENM3Q9P273 2699 aa5.75□□□□□ -1.49
HDAC6-216ENST00000468949 A0A1B0GXF2 115 aa5.75□□□□□ -1.49
HDAC6-216ENST00000468949 PAX4O43316 350 aa5.75□□□□□ -1.49
HDAC6-216ENST00000468949 SCO1O75880 301 aa5.75□□□□□ -1.49
HDAC6-216ENST00000468949 ELOBQ15370 118 aa5.75□□□□□ -1.49
HDAC6-216ENST00000468949 AMN1Q8IY45 258 aa5.75□□□□□ -1.49
HDAC6-216ENST00000468949 PHLDA1Q8WV24 401 aaPredicted RBP5.75□□□□□ -1.49
HDAC6-216ENST00000468949 SAMD10Q9BYL1 202 aa5.75□□□□□ -1.49
HDAC6-216ENST00000468949 PRO0255Q9UI72 69 aa5.75□□□□□ -1.49
HDAC6-216ENST00000468949 HHLA3Q9XRX5 114 aa5.75□□□□□ -1.49
HDAC6-216ENST00000468949 KLK5Q9Y337 293 aaPredicted RBP5.75□□□□□ -1.49
HDAC6-216ENST00000468949 TRBV24-1A0A075B6N3 115 aa5.74□□□□□ -1.49
HDAC6-216ENST00000468949 A0A0J9YY99 117 aa5.74□□□□□ -1.49
HDAC6-216ENST00000468949 PPP1R17O96001 155 aa5.74□□□□□ -1.49
HDAC6-216ENST00000468949 APCSP02743 223 aa5.74□□□□□ -1.49
HDAC6-216ENST00000468949 S100A6P06703 90 aa5.74□□□□□ -1.49
HDAC6-216ENST00000468949 CRYGDP07320 174 aa5.74□□□□□ -1.49
HDAC6-216ENST00000468949 GATA1P15976 413 aaPredicted RBP5.74□□□□□ -1.49
HDAC6-216ENST00000468949 CKS2P33552 79 aa5.74□□□□□ -1.49
HDAC6-216ENST00000468949 MRAP2Q96G30 205 aa5.74□□□□□ -1.49
HDAC6-216ENST00000468949 GNB1LQ9BYB4 327 aa5.74□□□□□ -1.49
HDAC6-216ENST00000468949 TRAV26-1A0A087WT03 109 aa5.73□□□□□ -1.49
HDAC6-216ENST00000468949 TRBV6-4A0A1B0GX49 114 aa5.73□□□□□ -1.49
HDAC6-216ENST00000468949 IGLL5B9A064 214 aa5.73□□□□□ -1.49
HDAC6-216ENST00000468949 H3BS24 57 aa5.73□□□□□ -1.49
HDAC6-216ENST00000468949 PPBPP02775 128 aa5.73□□□□□ -1.49
HDAC6-216ENST00000468949 GYPEP15421 78 aa5.73□□□□□ -1.49
HDAC6-216ENST00000468949 RPS10P46783 165 aaKnown RBP5.73□□□□□ -1.49
HDAC6-216ENST00000468949 RPL36AP83881 106 aaKnown RBP5.73□□□□□ -1.49
HDAC6-216ENST00000468949 FABP9Q0Z7S8 132 aa5.73□□□□□ -1.49
HDAC6-216ENST00000468949 FHL2Q14192 279 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms