RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 SPANXN1Q5VSR9 72 aa12.57□□□□□ -0.4
RPL39-202ENST00000468844 ATP5L2Q7Z4Y8 100 aa12.57□□□□□ -0.4
RPL39-202ENST00000468844 IGHV4-4A0A075B6R2 117 aa12.56□□□□□ -0.4
RPL39-202ENST00000468844 SNURFLB1AK76 121 aa12.56□□□□□ -0.4
RPL39-202ENST00000468844 IQCJQ1A5X6 159 aa12.56□□□□□ -0.4
RPL39-202ENST00000468844 Q8NAQ8 132 aa12.56□□□□□ -0.4
RPL39-202ENST00000468844 BORCS7Q96B45 105 aa12.56□□□□□ -0.4
RPL39-202ENST00000468844 FBN3Q75N90 2809 aa12.56□□□□□ -0.4
RPL39-202ENST00000468844 NXPH4O95158 308 aa12.56□□□□□ -0.4
RPL39-202ENST00000468844 ESDP10768 282 aa12.56□□□□□ -0.4
RPL39-202ENST00000468844 MIFP14174 115 aa12.56□□□□□ -0.4
RPL39-202ENST00000468844 CAMPP49913 170 aa12.56□□□□□ -0.4
RPL39-202ENST00000468844 TWIST1Q15672 202 aa12.56□□□□□ -0.4
RPL39-202ENST00000468844 TM2D3Q9BRN9 247 aa12.56□□□□□ -0.4
RPL39-202ENST00000468844 IGHV4-28A0A0C4DH34 117 aa12.55□□□□□ -0.4
RPL39-202ENST00000468844 CACNG7P62955 275 aa12.55□□□□□ -0.4
RPL39-202ENST00000468844 HBBP68871 147 aa12.55□□□□□ -0.4
RPL39-202ENST00000468844 ZNF876PQ49A33 203 aa12.55□□□□□ -0.4
RPL39-202ENST00000468844 COX19Q49B96 90 aa12.55□□□□□ -0.4
RPL39-202ENST00000468844 WDR73Q6P4I2 378 aa12.55□□□□□ -0.4
RPL39-202ENST00000468844 SPXQ9BT56 116 aa12.55□□□□□ -0.4
RPL39-202ENST00000468844 M0R2P5 195 aa12.54□□□□□ -0.4
RPL39-202ENST00000468844 MT-ND6P03923 174 aa12.54□□□□□ -0.4
RPL39-202ENST00000468844 EMP1P54849 157 aa12.54□□□□□ -0.4
RPL39-202ENST00000468844 RAB4BP61018 213 aa12.54□□□□□ -0.4
RPL39-202ENST00000468844 DAZ2Q13117 558 aaKnown RBP12.54□□□□□ -0.4
RPL39-202ENST00000468844 RIGQ13278 110 aa12.54□□□□□ -0.4
RPL39-202ENST00000468844 NOP10Q9NPE3 64 aaKnown RBP12.54□□□□□ -0.4
RPL39-202ENST00000468844 DEFB4AO15263 64 aa12.54□□□□□ -0.4
RPL39-202ENST00000468844 LINC00310P59036 64 aa12.54□□□□□ -0.4
RPL39-202ENST00000468844 Q0VG73 95 aa12.54□□□□□ -0.4
RPL39-202ENST00000468844 SPATA25Q9BR10 227 aa12.53□□□□□ -0.4
RPL39-202ENST00000468844 MRPL16Q9NX20 251 aaKnown RBP12.53□□□□□ -0.4
RPL39-202ENST00000468844 SCGB1D1O95968 90 aa12.52□□□□□ -0.4
RPL39-202ENST00000468844 RASL11AQ6T310 242 aa12.52□□□□□ -0.4
RPL39-202ENST00000468844 TMEM136Q6ZRR5 245 aa12.52□□□□□ -0.4
RPL39-202ENST00000468844 JPT2Q9H910 190 aa12.52□□□□□ -0.4
RPL39-202ENST00000468844 A0A1B0GW15 77 aa12.52□□□□□ -0.41
RPL39-202ENST00000468844 SERF1AO75920 110 aa12.52□□□□□ -0.41
RPL39-202ENST00000468844 Q6ZTI0 123 aa12.52□□□□□ -0.41
RPL39-202ENST00000468844 SYT8Q8NBV8 401 aa12.52□□□□□ -0.41
RPL39-202ENST00000468844 RASL10AQ92737 203 aa12.52□□□□□ -0.41
RPL39-202ENST00000468844 B9D2Q9BPU9 175 aa12.52□□□□□ -0.41
RPL39-202ENST00000468844 TGP01266 2768 aa12.52□□□□□ -0.41
RPL39-202ENST00000468844 TRGV1A0A0A0MS02 117 aa12.51□□□□□ -0.41
RPL39-202ENST00000468844 EVI2AP22794 236 aa12.51□□□□□ -0.41
RPL39-202ENST00000468844 BAGE3Q86Y29 109 aa12.51□□□□□ -0.41
RPL39-202ENST00000468844 PTH2Q96A98 100 aa12.51□□□□□ -0.41
RPL39-202ENST00000468844 LGALS9BQ3B8N2 356 aa12.5□□□□□ -0.41
RPL39-202ENST00000468844 PIK3CD-AS1Q5SR53 167 aa12.5□□□□□ -0.41
RPL39-202ENST00000468844 GATD1Q8NB37 220 aa12.5□□□□□ -0.41
RPL39-202ENST00000468844 AP1S3Q96PC3 154 aa12.5□□□□□ -0.41
RPL39-202ENST00000468844 NDUFAF3Q9BU61 184 aa12.5□□□□□ -0.41
RPL39-202ENST00000468844 TMEM191AQ9H0A3 160 aa12.5□□□□□ -0.41
RPL39-202ENST00000468844 DNAH7Q8WXX0 4024 aa12.49□□□□□ -0.41
RPL39-202ENST00000468844 C14orf178Q8N769 122 aaPredicted RBP12.49□□□□□ -0.41
RPL39-202ENST00000468844 HLA-DQA1P01909 254 aa12.49□□□□□ -0.41
RPL39-202ENST00000468844 OR10J3Q5JRS4 329 aa12.49□□□□□ -0.41
RPL39-202ENST00000468844 FAM222AQ5U5X8 452 aa12.49□□□□□ -0.41
RPL39-202ENST00000468844 SLAQ13239 276 aa12.48□□□□□ -0.41
RPL39-202ENST00000468844 LINC00469Q8N7U9 141 aa12.48□□□□□ -0.41
RPL39-202ENST00000468844 SAMD10Q9BYL1 202 aa12.48□□□□□ -0.41
RPL39-202ENST00000468844 DKK2Q9UBU2 259 aa12.48□□□□□ -0.41
RPL39-202ENST00000468844 CELA1Q9UNI1 258 aa12.48□□□□□ -0.41
RPL39-202ENST00000468844 KIF25-AS1Q9Y6Z4 181 aa12.48□□□□□ -0.41
RPL39-202ENST00000468844 CSMD3Q7Z407 3707 aa12.48□□□□□ -0.41
RPL39-202ENST00000468844 A0A087WWL8 130 aa12.47□□□□□ -0.41
RPL39-202ENST00000468844 AMN1Q8IY45 258 aa12.47□□□□□ -0.41
RPL39-202ENST00000468844 POM121L12Q8N7R1 296 aa12.47□□□□□ -0.41
RPL39-202ENST00000468844 ZMAT4Q9H898 229 aa12.47□□□□□ -0.41
RPL39-202ENST00000468844 GAGE12BA1L429 117 aa12.47□□□□□ -0.41
RPL39-202ENST00000468844 LYRM9A8MSI8 78 aa12.47□□□□□ -0.41
RPL39-202ENST00000468844 GAGE7O76087 117 aa12.47□□□□□ -0.41
RPL39-202ENST00000468844 CRYGDP07320 174 aa12.47□□□□□ -0.41
RPL39-202ENST00000468844 GAGE12FP0CL80 117 aa12.47□□□□□ -0.41
RPL39-202ENST00000468844 GAGE12GP0CL81 117 aa12.47□□□□□ -0.41
RPL39-202ENST00000468844 GAGE12IP0CL82 117 aa12.47□□□□□ -0.41
RPL39-202ENST00000468844 KIAA1644Q3SXP7 199 aa12.47□□□□□ -0.41
RPL39-202ENST00000468844 LBHQ53QV2 105 aaPredicted RBP12.47□□□□□ -0.41
RPL39-202ENST00000468844 FAM74A4Q5TZK3 123 aa12.47□□□□□ -0.41
RPL39-202ENST00000468844 CFAP126Q5VTH2 177 aa12.47□□□□□ -0.41
RPL39-202ENST00000468844 LINC00612Q8N6U2 182 aa12.47□□□□□ -0.41
RPL39-202ENST00000468844 C11orf68Q9H3H3 251 aaKnown RBP12.47□□□□□ -0.41
RPL39-202ENST00000468844 A8MWV9 139 aa12.46□□□□□ -0.42
RPL39-202ENST00000468844 DPH3P1Q9H4G8 78 aa12.46□□□□□ -0.42
RPL39-202ENST00000468844 DEFB130BP0DP73 79 aa12.45□□□□□ -0.42
RPL39-202ENST00000468844 DEFB130AP0DP74 79 aa12.45□□□□□ -0.42
RPL39-202ENST00000468844 LINC00315P59091 139 aa12.45□□□□□ -0.42
RPL39-202ENST00000468844 FAM104BQ5XKR9 115 aa12.45□□□□□ -0.42
RPL39-202ENST00000468844 SMIM15Q7Z3B0 74 aa12.45□□□□□ -0.42
RPL39-202ENST00000468844 A0A0J9YWU9 116 aa12.45□□□□□ -0.42
RPL39-202ENST00000468844 APCSP02743 223 aa12.45□□□□□ -0.42
RPL39-202ENST00000468844 RNF185Q96GF1 192 aa12.45□□□□□ -0.42
RPL39-202ENST00000468844 TRGV2A0A075B6R0 118 aa12.44□□□□□ -0.42
RPL39-202ENST00000468844 RS1O15537 224 aa12.44□□□□□ -0.42
RPL39-202ENST00000468844 SMIM17P0DL12 118 aa12.44□□□□□ -0.42
RPL39-202ENST00000468844 RAB4AP20338 218 aa12.44□□□□□ -0.42
RPL39-202ENST00000468844 SRIP30626 198 aa12.44□□□□□ -0.42
RPL39-202ENST00000468844 UFSP1Q6NVU6 142 aa12.44□□□□□ -0.42
RPL39-202ENST00000468844 C2orf88Q9BSF0 95 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms