RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 C11orf21Q9P2W6 132 aa6.14□□□□□ -1.43
BRCA1-208ENST00000468300 UQCR10Q9UDW1 63 aa6.14□□□□□ -1.43
BRCA1-208ENST00000468300 CYSLTR1Q9Y271 337 aa6.14□□□□□ -1.43
BRCA1-208ENST00000468300 APRG1Q8IVJ8 170 aa6.14□□□□□ -1.43
BRCA1-208ENST00000468300 ZFAND2AQ8N6M9 145 aa6.14□□□□□ -1.43
BRCA1-208ENST00000468300 OR8A1Q8NGG7 326 aa6.14□□□□□ -1.43
BRCA1-208ENST00000468300 TMEM101Q96IK0 257 aa6.14□□□□□ -1.43
BRCA1-208ENST00000468300 ANK2Q01484 3957 aa6.14□□□□□ -1.43
BRCA1-208ENST00000468300 RHODO00212 210 aa6.14□□□□□ -1.43
BRCA1-208ENST00000468300 OVOL1O14753 267 aa6.14□□□□□ -1.43
BRCA1-208ENST00000468300 KIR3DS1Q14943 382 aa6.14□□□□□ -1.43
BRCA1-208ENST00000468300 MEIG1Q5JSS6 88 aa6.14□□□□□ -1.43
BRCA1-208ENST00000468300 SPATA25Q9BR10 227 aa6.14□□□□□ -1.43
BRCA1-208ENST00000468300 TEP1Q99973 2627 aaKnown RBP6.13□□□□□ -1.43
BRCA1-208ENST00000468300 PRSS29PA6NIE9 313 aa6.13□□□□□ -1.43
BRCA1-208ENST00000468300 SH2D1AO60880 128 aa6.13□□□□□ -1.43
BRCA1-208ENST00000468300 ZNF138P52744 262 aa6.13□□□□□ -1.43
BRCA1-208ENST00000468300 KRTAP24-1Q3LI83 254 aa6.13□□□□□ -1.43
BRCA1-208ENST00000468300 ZFAND6Q6FIF0 208 aa6.13□□□□□ -1.43
BRCA1-208ENST00000468300 NEGR1Q7Z3B1 354 aa6.13□□□□□ -1.43
BRCA1-208ENST00000468300 RPP21Q9H633 154 aaKnown RBP6.13□□□□□ -1.43
BRCA1-208ENST00000468300 TRAV2A0A0B4J234 112 aa6.13□□□□□ -1.43
BRCA1-208ENST00000468300 TEX48A0A1B0GUV7 120 aa6.13□□□□□ -1.43
BRCA1-208ENST00000468300 ZNF688P0C7X2 276 aa6.13□□□□□ -1.43
BRCA1-208ENST00000468300 LINC00482Q8N8I6 264 aa6.13□□□□□ -1.43
BRCA1-208ENST00000468300 TSKUQ8WUA8 353 aa6.13□□□□□ -1.43
BRCA1-208ENST00000468300 AP1S3Q96PC3 154 aa6.13□□□□□ -1.43
BRCA1-208ENST00000468300 A0A0J9YX75 114 aa6.12□□□□□ -1.43
BRCA1-208ENST00000468300 VPREB1P12018 145 aa6.12□□□□□ -1.43
BRCA1-208ENST00000468300 PSMG4Q5JS54 123 aa6.12□□□□□ -1.43
BRCA1-208ENST00000468300 NUP35Q8NFH5 326 aa6.12□□□□□ -1.43
BRCA1-208ENST00000468300 A8MTW9 85 aa6.12□□□□□ -1.43
BRCA1-208ENST00000468300 FOXA3P55318 350 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-208ENST00000468300 XGP55808 180 aa6.12□□□□□ -1.43
BRCA1-208ENST00000468300 CRISP2P16562 243 aa6.12□□□□□ -1.43
BRCA1-208ENST00000468300 AMTNQ6UX39 209 aa6.12□□□□□ -1.43
BRCA1-208ENST00000468300 AGRNO00468 2067 aa6.11□□□□□ -1.43
BRCA1-208ENST00000468300 IGKV3D-20A0A0C4DH25 116 aa6.11□□□□□ -1.43
BRCA1-208ENST00000468300 IGLV1-51P01701 117 aa6.11□□□□□ -1.43
BRCA1-208ENST00000468300 P01737 135 aa6.11□□□□□ -1.43
BRCA1-208ENST00000468300 LENEPQ9Y5L5 61 aa6.11□□□□□ -1.43
BRCA1-208ENST00000468300 TRAV9-1A0A075B6T8 112 aa6.11□□□□□ -1.43
BRCA1-208ENST00000468300 A0A1B0GXF2 115 aa6.11□□□□□ -1.43
BRCA1-208ENST00000468300 RBMY1BA6NDE4 496 aaKnown RBP6.11□□□□□ -1.43
BRCA1-208ENST00000468300 RBMY1EA6NEQ0 496 aaKnown RBP6.11□□□□□ -1.43
BRCA1-208ENST00000468300 KLLNB2CW77 178 aa6.11□□□□□ -1.43
BRCA1-208ENST00000468300 RBMY1DP0C7P1 496 aaKnown RBP6.11□□□□□ -1.43
BRCA1-208ENST00000468300 OR4B1Q8NGF8 309 aa6.11□□□□□ -1.43
BRCA1-208ENST00000468300 GFRA4Q9GZZ7 299 aa6.11□□□□□ -1.43
BRCA1-208ENST00000468300 DNAH3Q8TD57 4116 aa6.11□□□□□ -1.43
BRCA1-208ENST00000468300 HIGD1CA8MV81 97 aa6.1□□□□□ -1.43
BRCA1-208ENST00000468300 NUDT3O95989 172 aa6.1□□□□□ -1.43
BRCA1-208ENST00000468300 C3orf56Q8N813 242 aa6.1□□□□□ -1.43
BRCA1-208ENST00000468300 OR10J6PQ8NGY7 276 aa6.1□□□□□ -1.43
BRCA1-208ENST00000468300 MAP6D1Q9H9H5 199 aa6.1□□□□□ -1.43
BRCA1-208ENST00000468300 ODF3L2Q3SX64 289 aa6.1□□□□□ -1.43
BRCA1-208ENST00000468300 C19orf73Q9NVV2 129 aa6.1□□□□□ -1.43
BRCA1-208ENST00000468300 SPINK4O60575 86 aa6.1□□□□□ -1.43
BRCA1-208ENST00000468300 SNRPD3P62318 126 aaKnown RBP6.1□□□□□ -1.43
BRCA1-208ENST00000468300 SERTAD4-AS1Q5TG53 156 aa6.1□□□□□ -1.43
BRCA1-208ENST00000468300 Q6AWC8 147 aa6.1□□□□□ -1.43
BRCA1-208ENST00000468300 LINC01561Q8N1V8 128 aa6.1□□□□□ -1.43
BRCA1-208ENST00000468300 FAM231BA6NCW3 169 aa6.09□□□□□ -1.43
BRCA1-208ENST00000468300 ZNF324O75467 553 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-208ENST00000468300 IGLC6P0CF74 106 aa6.09□□□□□ -1.43
BRCA1-208ENST00000468300 LYRM7Q5U5X0 104 aa6.09□□□□□ -1.43
BRCA1-208ENST00000468300 TMEM136Q6ZRR5 245 aa6.09□□□□□ -1.43
BRCA1-208ENST00000468300 DYNLRB2Q8TF09 96 aa6.09□□□□□ -1.43
BRCA1-208ENST00000468300 KNCNA6PVL3 124 aa6.09□□□□□ -1.43
BRCA1-208ENST00000468300 TAX1BP3O14907 124 aa6.09□□□□□ -1.43
BRCA1-208ENST00000468300 OXTP01178 125 aa6.09□□□□□ -1.43
BRCA1-208ENST00000468300 DEFB131AP59861 70 aa6.09□□□□□ -1.43
BRCA1-208ENST00000468300 ATRQ13535 2644 aa6.09□□□□□ -1.43
BRCA1-208ENST00000468300 BEAN1Q3B7T3 259 aa6.09□□□□□ -1.43
BRCA1-208ENST00000468300 FOXI2Q6ZQN5 318 aa6.09□□□□□ -1.43
BRCA1-208ENST00000468300 ODF3Q96PU9 254 aa6.09□□□□□ -1.43
BRCA1-208ENST00000468300 WNK1Q9H4A3 2382 aa6.09□□□□□ -1.43
BRCA1-208ENST00000468300 MAST4O15021 2626 aa6.09□□□□□ -1.44
BRCA1-208ENST00000468300 TRBV20-1A0A075B6N2 111 aa6.08□□□□□ -1.44
BRCA1-208ENST00000468300 A8MWL6 223 aa6.08□□□□□ -1.44
BRCA1-208ENST00000468300 H3BMM0 161 aa6.08□□□□□ -1.44
BRCA1-208ENST00000468300 RBMY1A1P0DJD3 496 aaKnown RBP6.08□□□□□ -1.44
BRCA1-208ENST00000468300 RBMY1CP0DJD4 496 aa6.08□□□□□ -1.44
BRCA1-208ENST00000468300 RBMY1FQ15415 496 aaKnown RBP6.08□□□□□ -1.44
BRCA1-208ENST00000468300 CRXO43186 299 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-208ENST00000468300 HLA-DRB4P13762 266 aa6.08□□□□□ -1.44
BRCA1-208ENST00000468300 FAM19A1Q7Z5A9 133 aa6.08□□□□□ -1.44
BRCA1-208ENST00000468300 PGLYRP4Q96LB8 373 aa6.08□□□□□ -1.44
BRCA1-208ENST00000468300 PRADC1Q9BSG0 188 aa6.08□□□□□ -1.44
BRCA1-208ENST00000468300 HLA-DRB4X5D2U9 266 aa6.08□□□□□ -1.44
BRCA1-208ENST00000468300 TRAV8-6A0A0B4J262 113 aa6.08□□□□□ -1.44
BRCA1-208ENST00000468300 OR2K2Q8NGT1 345 aa6.08□□□□□ -1.44
BRCA1-208ENST00000468300 TMSB15BA0A087X1C1 80 aa6.07□□□□□ -1.44
BRCA1-208ENST00000468300 MUC21A0A0G2JKD1 596 aa6.07□□□□□ -1.44
BRCA1-208ENST00000468300 A0A0U1RQV1 116 aa6.07□□□□□ -1.44
BRCA1-208ENST00000468300 EVI2AP22794 236 aa6.07□□□□□ -1.44
BRCA1-208ENST00000468300 MRPL54Q6P161 138 aaKnown RBP6.07□□□□□ -1.44
BRCA1-208ENST00000468300 SORL1Q92673 2214 aa6.07□□□□□ -1.44
BRCA1-208ENST00000468300 ARMS2P0C7Q2 107 aa6.07□□□□□ -1.44
BRCA1-208ENST00000468300 RNASE4P34096 147 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms