RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 MDFICQ9P1T7 246 aa7.47□□□□□ -1.21
MSH5-213ENST00000468136 ZMAT5Q9UDW3 170 aaKnown RBP7.47□□□□□ -1.21
MSH5-213ENST00000468136 SORL1Q92673 2214 aa7.46□□□□□ -1.22
MSH5-213ENST00000468136 KIR2DL5BA0A0G2JN68 375 aa7.46□□□□□ -1.22
MSH5-213ENST00000468136 KIR2DL5BA0A0G2JPC4 375 aa7.46□□□□□ -1.22
MSH5-213ENST00000468136 PCP4L1A6NKN8 68 aa7.46□□□□□ -1.22
MSH5-213ENST00000468136 SMKR1H3BMG3 65 aa7.46□□□□□ -1.22
MSH5-213ENST00000468136 VCYO14598 125 aa7.46□□□□□ -1.22
MSH5-213ENST00000468136 MGPP08493 103 aa7.46□□□□□ -1.22
MSH5-213ENST00000468136 LINC00315P59091 139 aa7.46□□□□□ -1.22
MSH5-213ENST00000468136 KIR2DL5AQ8N109 375 aa7.46□□□□□ -1.22
MSH5-213ENST00000468136 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.46□□□□□ -1.22
MSH5-213ENST00000468136 WFDC9Q8NEX5 89 aa7.46□□□□□ -1.22
MSH5-213ENST00000468136 ST20Q9HBF5 79 aa7.46□□□□□ -1.22
MSH5-213ENST00000468136 C19orf73Q9NVV2 129 aa7.46□□□□□ -1.22
MSH5-213ENST00000468136 FN1P02751 2386 aaKnown RBP7.45□□□□□ -1.22
MSH5-213ENST00000468136 HSBP1L1C9JCN9 74 aa7.45□□□□□ -1.22
MSH5-213ENST00000468136 WIPF1O43516 503 aa7.45□□□□□ -1.22
MSH5-213ENST00000468136 CRYGDP07320 174 aa7.45□□□□□ -1.22
MSH5-213ENST00000468136 LGALS9BQ3B8N2 356 aa7.45□□□□□ -1.22
MSH5-213ENST00000468136 LINC01545Q5VT33 79 aa7.45□□□□□ -1.22
MSH5-213ENST00000468136 LGALS9CQ6DKI2 356 aa7.45□□□□□ -1.22
MSH5-213ENST00000468136 ZFP2Q6ZN57 461 aa7.45□□□□□ -1.22
MSH5-213ENST00000468136 ZNF664Q8N3J9 261 aa7.45□□□□□ -1.22
MSH5-213ENST00000468136 Q8N976 141 aa7.45□□□□□ -1.22
MSH5-213ENST00000468136 TMEM263Q8WUH6 116 aaKnown RBP7.45□□□□□ -1.22
MSH5-213ENST00000468136 RASL10AQ92737 203 aa7.45□□□□□ -1.22
MSH5-213ENST00000468136 IFI27L1Q96BM0 104 aa7.45□□□□□ -1.22
MSH5-213ENST00000468136 KIR2DL4Q99706 377 aa7.45□□□□□ -1.22
MSH5-213ENST00000468136 C2CD3Q4AC94 2353 aa7.44□□□□□ -1.22
MSH5-213ENST00000468136 TRAV9-2A0A087WT02 112 aa7.44□□□□□ -1.22
MSH5-213ENST00000468136 F5H697 171 aa7.44□□□□□ -1.22
MSH5-213ENST00000468136 RBMY1A1P0DJD3 496 aaKnown RBP7.44□□□□□ -1.22
MSH5-213ENST00000468136 RBMY1CP0DJD4 496 aa7.44□□□□□ -1.22
MSH5-213ENST00000468136 FXYD7P58549 80 aa7.44□□□□□ -1.22
MSH5-213ENST00000468136 RBMY1FQ15415 496 aaKnown RBP7.44□□□□□ -1.22
MSH5-213ENST00000468136 MRPL52Q86TS9 123 aaKnown RBP7.44□□□□□ -1.22
MSH5-213ENST00000468136 C16orf74Q96GX8 76 aa7.44□□□□□ -1.22
MSH5-213ENST00000468136 DNAJC30Q96LL9 226 aa7.44□□□□□ -1.22
MSH5-213ENST00000468136 A0A096LNJ9 63 aa7.43□□□□□ -1.22
MSH5-213ENST00000468136 TRBV27A0A0K0K1C4 114 aa7.43□□□□□ -1.22
MSH5-213ENST00000468136 NUDT3O95989 172 aa7.43□□□□□ -1.22
MSH5-213ENST00000468136 DDTP30046 118 aa7.43□□□□□ -1.22
MSH5-213ENST00000468136 POLR2KP53803 58 aaKnown RBP7.43□□□□□ -1.22
MSH5-213ENST00000468136 DAZ2Q13117 558 aaKnown RBP7.43□□□□□ -1.22
MSH5-213ENST00000468136 RHOHQ15669 191 aa7.43□□□□□ -1.22
MSH5-213ENST00000468136 ZNF124Q15973 351 aa7.43□□□□□ -1.22
MSH5-213ENST00000468136 PRR31Q5SQ13 230 aa7.43□□□□□ -1.22
MSH5-213ENST00000468136 SUMO4Q6EEV6 95 aa7.43□□□□□ -1.22
MSH5-213ENST00000468136 CDPF1Q6NVV7 123 aa7.43□□□□□ -1.22
MSH5-213ENST00000468136 C11orf72Q8NBR9 251 aa7.43□□□□□ -1.22
MSH5-213ENST00000468136 XCL2Q9UBD3 114 aa7.43□□□□□ -1.22
MSH5-213ENST00000468136 AGRNO00468 2067 aa7.43□□□□□ -1.22
MSH5-213ENST00000468136 TRAV26-2A0A0B4J265 109 aa7.42□□□□□ -1.22
MSH5-213ENST00000468136 SMIM9A6NGZ8 99 aa7.42□□□□□ -1.22
MSH5-213ENST00000468136 M0QY20 66 aa7.42□□□□□ -1.22
MSH5-213ENST00000468136 RS1O15537 224 aa7.42□□□□□ -1.22
MSH5-213ENST00000468136 GATA1P15976 413 aaPredicted RBP7.42□□□□□ -1.22
MSH5-213ENST00000468136 ZNF56Q15929 161 aa7.42□□□□□ -1.22
MSH5-213ENST00000468136 ZNF705AQ6ZN79 300 aaPredicted RBP7.42□□□□□ -1.22
MSH5-213ENST00000468136 C1orf158Q8N1D5 194 aa7.42□□□□□ -1.22
MSH5-213ENST00000468136 KIR2DL5BQ8NHK3 375 aa7.42□□□□□ -1.22
MSH5-213ENST00000468136 IL17DQ8TAD2 202 aa7.42□□□□□ -1.22
MSH5-213ENST00000468136 TMEM158Q8WZ71 300 aa7.42□□□□□ -1.22
MSH5-213ENST00000468136 CSTL1Q9H114 145 aa7.42□□□□□ -1.22
MSH5-213ENST00000468136 WNK1Q9H4A3 2382 aa7.42□□□□□ -1.22
MSH5-213ENST00000468136 MUC4Q99102 2169 aa7.42□□□□□ -1.22
MSH5-213ENST00000468136 NSD1Q96L73 2696 aaPredicted RBP7.41□□□□□ -1.22
MSH5-213ENST00000468136 A0A087WWL8 130 aa7.41□□□□□ -1.22
MSH5-213ENST00000468136 NPSP0C0P6 89 aa7.41□□□□□ -1.22
MSH5-213ENST00000468136 HIST2H2BDQ6DRA6 164 aa7.41□□□□□ -1.22
MSH5-213ENST00000468136 SHISA2Q6UWI4 295 aa7.41□□□□□ -1.22
MSH5-213ENST00000468136 RNASE8Q8TDE3 154 aaKnown RBP7.41□□□□□ -1.22
MSH5-213ENST00000468136 TOMM6Q96B49 74 aa7.41□□□□□ -1.22
MSH5-213ENST00000468136 MIEN1Q9BRT3 115 aa7.41□□□□□ -1.22
MSH5-213ENST00000468136 UQCR10Q9UDW1 63 aa7.41□□□□□ -1.22
MSH5-213ENST00000468136 OTOGQ6ZRI0 2925 aa7.41□□□□□ -1.22
MSH5-213ENST00000468136 TRAV12-1A0A0B4J245 112 aa7.4□□□□□ -1.22
MSH5-213ENST00000468136 TRBV10-1A0A0K0K1A3 114 aa7.4□□□□□ -1.22
MSH5-213ENST00000468136 SDHAF1A6NFY7 115 aa7.4□□□□□ -1.22
MSH5-213ENST00000468136 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.4□□□□□ -1.22
MSH5-213ENST00000468136 GAS8-AS1O95177 125 aa7.4□□□□□ -1.22
MSH5-213ENST00000468136 HTN1P15515 57 aa7.4□□□□□ -1.22
MSH5-213ENST00000468136 APOC4P55056 127 aa7.4□□□□□ -1.22
MSH5-213ENST00000468136 RIPPLY3P57055 190 aa7.4□□□□□ -1.22
MSH5-213ENST00000468136 DEFA6Q01524 100 aa7.4□□□□□ -1.22
MSH5-213ENST00000468136 RRN3P1Q2M238 152 aa7.4□□□□□ -1.22
MSH5-213ENST00000468136 SPATA45Q537H7 98 aa7.4□□□□□ -1.22
MSH5-213ENST00000468136 LBHQ53QV2 105 aaPredicted RBP7.4□□□□□ -1.22
MSH5-213ENST00000468136 FAM74A4Q5TZK3 123 aa7.4□□□□□ -1.22
MSH5-213ENST00000468136 UFSP1Q6NVU6 142 aa7.4□□□□□ -1.22
MSH5-213ENST00000468136 PMCHL2Q9BQD1 86 aa7.4□□□□□ -1.22
MSH5-213ENST00000468136 OVOL2Q9BRP0 275 aa7.4□□□□□ -1.22
MSH5-213ENST00000468136 CYSLTR1Q9Y271 337 aa7.4□□□□□ -1.22
MSH5-213ENST00000468136 PAM16Q9Y3D7 125 aa7.4□□□□□ -1.22
MSH5-213ENST00000468136 F8P00451 2351 aa7.39□□□□□ -1.23
MSH5-213ENST00000468136 TRAV4A0A0B4J268 109 aa7.39□□□□□ -1.23
MSH5-213ENST00000468136 I3L3M4 83 aa7.39□□□□□ -1.23
MSH5-213ENST00000468136 IGHV3-53P01767 116 aa7.39□□□□□ -1.23
MSH5-213ENST00000468136 PAPPA-AS1Q5QFB9 102 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms