RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 CHD8Q9HCK8 2581 aa0.93□□□□□ -2.26
GAPVD1-211ENST00000467707 LOC107986453A0A1B0GWG9 222 aa0.93□□□□□ -2.26
GAPVD1-211ENST00000467707 H0YJX3 145 aa0.93□□□□□ -2.26
GAPVD1-211ENST00000467707 DNAJB13P59910 316 aa0.93□□□□□ -2.26
GAPVD1-211ENST00000467707 NEDD8Q15843 81 aa0.93□□□□□ -2.26
GAPVD1-211ENST00000467707 TMEM128Q5BJH2 165 aa0.93□□□□□ -2.26
GAPVD1-211ENST00000467707 SAMD13Q5VXD3 122 aa0.93□□□□□ -2.26
GAPVD1-211ENST00000467707 MORN4Q8NDC4 146 aa0.93□□□□□ -2.26
GAPVD1-211ENST00000467707 HEATR1Q9H583 2144 aaKnown RBP0.93□□□□□ -2.26
GAPVD1-211ENST00000467707 XIRP2A4UGR9 3374 aa0.93□□□□□ -2.26
GAPVD1-211ENST00000467707 MAP2P11137 1827 aaKnown RBP0.93□□□□□ -2.26
GAPVD1-211ENST00000467707 COL4A6Q14031 1691 aa0.93□□□□□ -2.26
GAPVD1-211ENST00000467707 DLEC1Q9Y238 1755 aa0.93□□□□□ -2.26
GAPVD1-211ENST00000467707 EPG5Q9HCE0 2579 aa0.93□□□□□ -2.26
GAPVD1-211ENST00000467707 NRXN2Q9P2S2 1712 aa0.92□□□□□ -2.26
GAPVD1-211ENST00000467707 AFDNP55196 1824 aaKnown RBP0.92□□□□□ -2.26
GAPVD1-211ENST00000467707 MYO18AQ92614 2054 aaKnown RBP0.92□□□□□ -2.26
GAPVD1-211ENST00000467707 SPTBN4Q9H254 2564 aa0.92□□□□□ -2.26
GAPVD1-211ENST00000467707 DNAH12Q6ZR08 3092 aa0.92□□□□□ -2.26
GAPVD1-211ENST00000467707 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.92□□□□□ -2.26
GAPVD1-211ENST00000467707 SULT1C4O75897 302 aa0.92□□□□□ -2.26
GAPVD1-211ENST00000467707 HRCT1Q6UXD1 115 aa0.92□□□□□ -2.26
GAPVD1-211ENST00000467707 MPC1Q9Y5U8 109 aa0.92□□□□□ -2.26
GAPVD1-211ENST00000467707 KDM3BQ7LBC6 1761 aa0.92□□□□□ -2.26
GAPVD1-211ENST00000467707 FASNP49327 2511 aaKnown RBP0.92□□□□□ -2.26
GAPVD1-211ENST00000467707 BDP1A6H8Y1 2624 aa0.92□□□□□ -2.26
GAPVD1-211ENST00000467707 MAST4O15021 2626 aa0.92□□□□□ -2.26
GAPVD1-211ENST00000467707 ANKRD31Q8N7Z5 1873 aa0.92□□□□□ -2.26
GAPVD1-211ENST00000467707 CHD6Q8TD26 2715 aa0.92□□□□□ -2.26
GAPVD1-211ENST00000467707 MAP1BP46821 2468 aaKnown RBP0.92□□□□□ -2.26
GAPVD1-211ENST00000467707 DMXL1Q9Y485 3027 aa0.91□□□□□ -2.26
GAPVD1-211ENST00000467707 SCN7AQ01118 1682 aa0.91□□□□□ -2.26
GAPVD1-211ENST00000467707 RGPD2P0DJD1 1756 aa0.91□□□□□ -2.26
GAPVD1-211ENST00000467707 UNC13CQ8NB66 2214 aa0.91□□□□□ -2.26
GAPVD1-211ENST00000467707 SPEGQ15772 3267 aa0.91□□□□□ -2.26
GAPVD1-211ENST00000467707 ARL5CA6NH57 179 aa0.91□□□□□ -2.26
GAPVD1-211ENST00000467707 FXYD6P3P58550 94 aa0.91□□□□□ -2.26
GAPVD1-211ENST00000467707 SPATA8Q6RVD6 105 aa0.91□□□□□ -2.26
GAPVD1-211ENST00000467707 TAC4Q86UU9 113 aa0.91□□□□□ -2.26
GAPVD1-211ENST00000467707 TMEM229BQ8NBD8 167 aa0.91□□□□□ -2.26
GAPVD1-211ENST00000467707 SKA2Q8WVK7 121 aaPredicted RBP0.91□□□□□ -2.26
GAPVD1-211ENST00000467707 LIMD2Q9BT23 127 aa0.91□□□□□ -2.26
GAPVD1-211ENST00000467707 LRRC37A2A6NM11 1700 aa0.91□□□□□ -2.26
GAPVD1-211ENST00000467707 TJP1Q07157 1748 aa0.91□□□□□ -2.26
GAPVD1-211ENST00000467707 MED12Q93074 2177 aa0.91□□□□□ -2.26
GAPVD1-211ENST00000467707 ZNF292O60281 2723 aa0.91□□□□□ -2.26
GAPVD1-211ENST00000467707 MYH2Q9UKX2 1941 aa0.91□□□□□ -2.26
GAPVD1-211ENST00000467707 SSC5DA1L4H1 1573 aa0.91□□□□□ -2.26
GAPVD1-211ENST00000467707 NOTCH1P46531 2555 aa0.91□□□□□ -2.26
GAPVD1-211ENST00000467707 ZNF831Q5JPB2 1677 aa0.91□□□□□ -2.26
GAPVD1-211ENST00000467707 ANKRD11Q6UB99 2663 aaPredicted RBP0.91□□□□□ -2.26
GAPVD1-211ENST00000467707 NCOR2Q9Y618 2525 aa0.9□□□□□ -2.26
GAPVD1-211ENST00000467707 EML5Q05BV3 1969 aa0.9□□□□□ -2.26
GAPVD1-211ENST00000467707 VPS13AQ96RL7 3174 aa0.9□□□□□ -2.26
GAPVD1-211ENST00000467707 FLNBO75369 2602 aaKnown RBP0.9□□□□□ -2.26
GAPVD1-211ENST00000467707 TEP1Q99973 2627 aaKnown RBP0.9□□□□□ -2.26
GAPVD1-211ENST00000467707 USP24Q9UPU5 2620 aa0.9□□□□□ -2.26
GAPVD1-211ENST00000467707 NAV2Q8IVL1 2488 aa0.9□□□□□ -2.27
GAPVD1-211ENST00000467707 GCN1Q92616 2671 aaKnown RBP0.9□□□□□ -2.27
GAPVD1-211ENST00000467707 BBIP1A8MTZ0 92 aa0.9□□□□□ -2.27
GAPVD1-211ENST00000467707 SNRNP200O75643 2136 aaKnown RBP0.9□□□□□ -2.27
GAPVD1-211ENST00000467707 CCL4P13236 92 aa0.9□□□□□ -2.27
GAPVD1-211ENST00000467707 S100GP29377 79 aa0.9□□□□□ -2.27
GAPVD1-211ENST00000467707 RPL37AP61513 92 aaKnown RBP0.9□□□□□ -2.27
GAPVD1-211ENST00000467707 TCTEX1D1Q8N7M0 179 aa0.9□□□□□ -2.27
GAPVD1-211ENST00000467707 NABP2Q9BQ15 211 aa0.9□□□□□ -2.27
GAPVD1-211ENST00000467707 NIT2Q9NQR4 276 aa0.9□□□□□ -2.27
GAPVD1-211ENST00000467707 ASH1LQ9NR48 2969 aaKnown RBP0.9□□□□□ -2.27
GAPVD1-211ENST00000467707 C19orf12Q9NSK7 152 aa0.9□□□□□ -2.27
GAPVD1-211ENST00000467707 ZNF469Q96JG9 3925 aaPredicted RBP0.9□□□□□ -2.27
GAPVD1-211ENST00000467707 IBTKQ9P2D0 1353 aaPredicted RBP0.9□□□□□ -2.27
GAPVD1-211ENST00000467707 MED23Q9ULK4 1368 aa0.9□□□□□ -2.27
GAPVD1-211ENST00000467707 ARFGEF2Q9Y6D5 1785 aa0.9□□□□□ -2.27
GAPVD1-211ENST00000467707 LOC400499M0QZD8 3231 aa0.9□□□□□ -2.27
GAPVD1-211ENST00000467707 TPRP12270 2363 aaKnown RBP0.9□□□□□ -2.27
GAPVD1-211ENST00000467707 ASPMQ8IZT6 3477 aa0.9□□□□□ -2.27
GAPVD1-211ENST00000467707 DDX60LQ5H9U9 1706 aaKnown RBP0.89□□□□□ -2.27
GAPVD1-211ENST00000467707 PTPRFP10586 1907 aa0.89□□□□□ -2.27
GAPVD1-211ENST00000467707 FRYQ5TBA9 3013 aa0.89□□□□□ -2.27
GAPVD1-211ENST00000467707 DNAH14Q0VDD8 3507 aa0.89□□□□□ -2.27
GAPVD1-211ENST00000467707 DUOX1Q9NRD9 1551 aa0.89□□□□□ -2.27
GAPVD1-211ENST00000467707 PRORSD1PA6NEY8 169 aa0.89□□□□□ -2.27
GAPVD1-211ENST00000467707 NDUFA2O43678 99 aa0.89□□□□□ -2.27
GAPVD1-211ENST00000467707 GYPBP06028 91 aa0.89□□□□□ -2.27
GAPVD1-211ENST00000467707 NBEAP1P0C6P0 100 aa0.89□□□□□ -2.27
GAPVD1-211ENST00000467707 ETV6P41212 452 aa0.89□□□□□ -2.27
GAPVD1-211ENST00000467707 KRTAP19-3Q7Z4W3 81 aa0.89□□□□□ -2.27
GAPVD1-211ENST00000467707 TEX29Q8N6K0 151 aa0.89□□□□□ -2.27
GAPVD1-211ENST00000467707 C10orf95Q9H7T3 257 aa0.89□□□□□ -2.27
GAPVD1-211ENST00000467707 TRAPPC2LQ9UL33 140 aa0.89□□□□□ -2.27
GAPVD1-211ENST00000467707 GINS2Q9Y248 185 aa0.89□□□□□ -2.27
GAPVD1-211ENST00000467707 NDUFAF1Q9Y375 327 aa0.89□□□□□ -2.27
GAPVD1-211ENST00000467707 BPTFQ12830 3046 aa0.89□□□□□ -2.27
GAPVD1-211ENST00000467707 FBN2P35556 2912 aa0.89□□□□□ -2.27
GAPVD1-211ENST00000467707 ZFYVE26Q68DK2 2539 aa0.89□□□□□ -2.27
GAPVD1-211ENST00000467707 NCOR1O75376 2440 aa0.89□□□□□ -2.27
GAPVD1-211ENST00000467707 MYO15AQ9UKN7 3530 aa0.89□□□□□ -2.27
GAPVD1-211ENST00000467707 ACACBO00763 2458 aa0.89□□□□□ -2.27
GAPVD1-211ENST00000467707 USP9XQ93008 2570 aaPredicted RBP0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 SPTBN2O15020 2390 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms