RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 GAGE12JA6NER3 117 aa12.24□□□□□ -0.45
CGREF1-208ENST00000467539 IBA57-AS1B1ANH7 110 aa12.24□□□□□ -0.45
CGREF1-208ENST00000467539 M0R381 172 aa12.24□□□□□ -0.45
CGREF1-208ENST00000467539 EREGO14944 169 aa12.24□□□□□ -0.45
CGREF1-208ENST00000467539 LINC00694P0DN24 101 aa12.24□□□□□ -0.45
CGREF1-208ENST00000467539 GAGE1Q13065 139 aa12.24□□□□□ -0.45
CGREF1-208ENST00000467539 GAGE4Q13068 117 aa12.24□□□□□ -0.45
CGREF1-208ENST00000467539 GAGE5Q13069 117 aa12.24□□□□□ -0.45
CGREF1-208ENST00000467539 GAGE13Q4V321 117 aa12.24□□□□□ -0.45
CGREF1-208ENST00000467539 A0A087WWL8 130 aa12.23□□□□□ -0.45
CGREF1-208ENST00000467539 CDK2AP2O75956 126 aa12.23□□□□□ -0.45
CGREF1-208ENST00000467539 RPL19P84098 196 aaKnown RBP12.23□□□□□ -0.45
CGREF1-208ENST00000467539 DERL1Q9BUN8 251 aa12.23□□□□□ -0.45
CGREF1-208ENST00000467539 RYR1P21817 5038 aa12.22□□□□□ -0.45
CGREF1-208ENST00000467539 ERVFC1-1P60608 527 aa12.22□□□□□ -0.45
CGREF1-208ENST00000467539 FAM74A4Q5TZK3 123 aa12.22□□□□□ -0.45
CGREF1-208ENST00000467539 AKAP14Q86UN6 197 aa12.22□□□□□ -0.45
CGREF1-208ENST00000467539 A0A087WTM6 91 aa12.21□□□□□ -0.45
CGREF1-208ENST00000467539 A0A087WWC5 75 aa12.21□□□□□ -0.45
CGREF1-208ENST00000467539 SNAI2O43623 268 aa12.21□□□□□ -0.45
CGREF1-208ENST00000467539 PDE6DO43924 150 aa12.21□□□□□ -0.45
CGREF1-208ENST00000467539 OR5AL1P0C617 328 aa12.21□□□□□ -0.45
CGREF1-208ENST00000467539 MEF2BQ02080 365 aaPredicted RBP12.21□□□□□ -0.45
CGREF1-208ENST00000467539 PRR27Q6MZM9 219 aa12.21□□□□□ -0.45
CGREF1-208ENST00000467539 IFNA1P01562 189 aa12.2□□□□□ -0.46
CGREF1-208ENST00000467539 IGLV2-8P01709 118 aa12.2□□□□□ -0.46
CGREF1-208ENST00000467539 KRTAP17-1Q9BYP8 105 aa12.2□□□□□ -0.46
CGREF1-208ENST00000467539 DNAH5Q8TE73 4624 aa12.19□□□□□ -0.46
CGREF1-208ENST00000467539 TRBV10-1A0A0K0K1A3 114 aa12.19□□□□□ -0.46
CGREF1-208ENST00000467539 RAB19A4D1S5 217 aa12.19□□□□□ -0.46
CGREF1-208ENST00000467539 RAB4BP61018 213 aa12.19□□□□□ -0.46
CGREF1-208ENST00000467539 C9orf62Q8N4C0 152 aa12.19□□□□□ -0.46
CGREF1-208ENST00000467539 OR10AG1Q8NH19 301 aa12.19□□□□□ -0.46
CGREF1-208ENST00000467539 SMIM12Q96EX1 92 aa12.19□□□□□ -0.46
CGREF1-208ENST00000467539 VAX2Q9UIW0 290 aa12.19□□□□□ -0.46
CGREF1-208ENST00000467539 IGHV3-30P01768 117 aa12.18□□□□□ -0.46
CGREF1-208ENST00000467539 IGHV3-33P01772 117 aa12.18□□□□□ -0.46
CGREF1-208ENST00000467539 IGHV3-30-3P0DP02 117 aa12.18□□□□□ -0.46
CGREF1-208ENST00000467539 IGHV3-30-5P0DP03 117 aa12.18□□□□□ -0.46
CGREF1-208ENST00000467539 TAGLN2P37802 199 aaKnown RBP12.18□□□□□ -0.46
CGREF1-208ENST00000467539 CENPWQ5EE01 88 aa12.18□□□□□ -0.46
CGREF1-208ENST00000467539 DAZAP1Q96EP5 407 aaKnown RBP12.18□□□□□ -0.46
CGREF1-208ENST00000467539 MED9Q9NWA0 146 aa12.18□□□□□ -0.46
CGREF1-208ENST00000467539 hCG_2014768A0A024R1R8 64 aa12.17□□□□□ -0.46
CGREF1-208ENST00000467539 C19orf71A6NCJ1 209 aa12.17□□□□□ -0.46
CGREF1-208ENST00000467539 BCL2P10415 239 aa12.17□□□□□ -0.46
CGREF1-208ENST00000467539 GNG4P50150 75 aa12.17□□□□□ -0.46
CGREF1-208ENST00000467539 SPANXN1Q5VSR9 72 aa12.17□□□□□ -0.46
CGREF1-208ENST00000467539 CDPF1Q6NVV7 123 aa12.17□□□□□ -0.46
CGREF1-208ENST00000467539 TRBV7-3A0A075B6L6 115 aa12.16□□□□□ -0.46
CGREF1-208ENST00000467539 RPS20P60866 119 aaKnown RBP12.16□□□□□ -0.46
CGREF1-208ENST00000467539 RPL36AP83881 106 aaKnown RBP12.16□□□□□ -0.46
CGREF1-208ENST00000467539 LAGE3Q14657 143 aa12.16□□□□□ -0.46
CGREF1-208ENST00000467539 OR10G8Q8NGN5 311 aa12.16□□□□□ -0.46
CGREF1-208ENST00000467539 RPL36ALQ969Q0 106 aaKnown RBP12.16□□□□□ -0.46
CGREF1-208ENST00000467539 HSPG2P98160 4391 aa12.16□□□□□ -0.46
CGREF1-208ENST00000467539 MUC21A0A0G2JKD1 596 aa12.15□□□□□ -0.46
CGREF1-208ENST00000467539 MUC21A0A140T8X8 626 aa12.15□□□□□ -0.46
CGREF1-208ENST00000467539 BIN3Q9NQY0 253 aa12.15□□□□□ -0.46
CGREF1-208ENST00000467539 LRCOL1A6NCL2 159 aa12.14□□□□□ -0.47
CGREF1-208ENST00000467539 PSCAO43653 123 aa12.14□□□□□ -0.47
CGREF1-208ENST00000467539 IGLC6P0CF74 106 aa12.14□□□□□ -0.47
CGREF1-208ENST00000467539 UBE2D3P61077 147 aa12.14□□□□□ -0.47
CGREF1-208ENST00000467539 UBE2D2P62837 147 aa12.14□□□□□ -0.47
CGREF1-208ENST00000467539 BLOC1S1P78537 153 aa12.14□□□□□ -0.47
CGREF1-208ENST00000467539 OR2D3Q8NGH3 330 aa12.14□□□□□ -0.47
CGREF1-208ENST00000467539 KIF25-AS1Q9Y6Z4 181 aa12.14□□□□□ -0.47
CGREF1-208ENST00000467539 TRBV20OR9-2A0A075B6H5 130 aa12.13□□□□□ -0.47
CGREF1-208ENST00000467539 SSTP61278 116 aa12.13□□□□□ -0.47
CGREF1-208ENST00000467539 TM2D2Q9BX73 214 aa12.13□□□□□ -0.47
CGREF1-208ENST00000467539 Q9HAA7 133 aa12.13□□□□□ -0.47
CGREF1-208ENST00000467539 TRAV8-3A0A0A6YYJ7 113 aa12.12□□□□□ -0.47
CGREF1-208ENST00000467539 XKRY2A2RUG3 117 aa12.12□□□□□ -0.47
CGREF1-208ENST00000467539 GZMBP10144 247 aa12.12□□□□□ -0.47
CGREF1-208ENST00000467539 FUSP35637 526 aaKnown RBP eCLIP12.12□□□□□ -0.47
CGREF1-208ENST00000467539 DAZ4Q86SG3 579 aaKnown RBP12.12□□□□□ -0.47
CGREF1-208ENST00000467539 NIT1Q86X76 327 aa12.12□□□□□ -0.47
CGREF1-208ENST00000467539 Q8N3U1 123 aa12.12□□□□□ -0.47
CGREF1-208ENST00000467539 LYPD6BQ8NI32 183 aa12.12□□□□□ -0.47
CGREF1-208ENST00000467539 DAZ3Q9NR90 486 aaKnown RBP12.12□□□□□ -0.47
CGREF1-208ENST00000467539 APOBP04114 4563 aaKnown RBP12.11□□□□□ -0.47
CGREF1-208ENST00000467539 F2Z2F3 143 aa12.11□□□□□ -0.47
CGREF1-208ENST00000467539 F5H697 171 aa12.11□□□□□ -0.47
CGREF1-208ENST00000467539 P01737 135 aa12.11□□□□□ -0.47
CGREF1-208ENST00000467539 SMIM17P0DL12 118 aa12.11□□□□□ -0.47
CGREF1-208ENST00000467539 ZNF56Q15929 161 aa12.11□□□□□ -0.47
CGREF1-208ENST00000467539 TOR2AQ5JU69 321 aa12.11□□□□□ -0.47
CGREF1-208ENST00000467539 ALKAL2Q6UX46 152 aa12.11□□□□□ -0.47
CGREF1-208ENST00000467539 FER1L6-AS1Q8NA97 138 aa12.11□□□□□ -0.47
CGREF1-208ENST00000467539 NEXN-AS1Q8NBZ9 246 aa12.11□□□□□ -0.47
CGREF1-208ENST00000467539 RBFOX3A6NFN3 312 aa12.1□□□□□ -0.47
CGREF1-208ENST00000467539 CACNG7P62955 275 aa12.1□□□□□ -0.47
CGREF1-208ENST00000467539 MAPKAPK5-AS1Q8N8E1 139 aa12.1□□□□□ -0.47
CGREF1-208ENST00000467539 NUDT10Q8NFP7 164 aa12.1□□□□□ -0.47
CGREF1-208ENST00000467539 NUDT11Q96G61 164 aa12.1□□□□□ -0.47
CGREF1-208ENST00000467539 KRTAP4-5Q9BYR2 181 aa12.1□□□□□ -0.47
CGREF1-208ENST00000467539 WDR73Q6P4I2 378 aa12.09□□□□□ -0.47
CGREF1-208ENST00000467539 OCC1Q8TAD7 63 aa12.09□□□□□ -0.47
CGREF1-208ENST00000467539 AP1S3Q96PC3 154 aa12.09□□□□□ -0.47
CGREF1-208ENST00000467539 CHCHD7Q9BUK0 85 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms