RNA–Protein interactions for RNA: ENST00000467366.1

PTPRE-206, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-206ENST00000467366 GTSCR1Q86UQ5 136 aa4.82□□□□□ -1.64
PTPRE-206ENST00000467366 HOGA1Q86XE5 327 aa4.82□□□□□ -1.64
PTPRE-206ENST00000467366 WFDC3Q8IUB2 231 aa4.82□□□□□ -1.64
PTPRE-206ENST00000467366 ZNF645Q8N7E2 425 aa4.82□□□□□ -1.64
PTPRE-206ENST00000467366 EEF1AKMT3Q96AZ1 226 aa4.82□□□□□ -1.64
PTPRE-206ENST00000467366 ABHD14BQ96IU4 210 aa4.82□□□□□ -1.64
PTPRE-206ENST00000467366 ZNF286AQ9HBT8 521 aa4.82□□□□□ -1.64
PTPRE-206ENST00000467366 PRR13Q9NZ81 148 aa4.82□□□□□ -1.64
PTPRE-206ENST00000467366 SERP1Q9Y6X1 66 aa4.82□□□□□ -1.64
PTPRE-206ENST00000467366 TNCP24821 2201 aa4.82□□□□□ -1.64
PTPRE-206ENST00000467366 TRAV2A0A0B4J234 112 aa4.81□□□□□ -1.64
PTPRE-206ENST00000467366 TRAV8-2A0A0B4J237 113 aa4.81□□□□□ -1.64
PTPRE-206ENST00000467366 LOC107986453A0A1B0GWG9 222 aa4.81□□□□□ -1.64
PTPRE-206ENST00000467366 CEBPZOSA8MTT3 80 aa4.81□□□□□ -1.64
PTPRE-206ENST00000467366 ACYP1P07311 99 aa4.81□□□□□ -1.64
PTPRE-206ENST00000467366 ZNF20P17024 532 aa4.81□□□□□ -1.64
PTPRE-206ENST00000467366 HLA-DMBP28068 263 aa4.81□□□□□ -1.64
PTPRE-206ENST00000467366 UBE2L3P68036 154 aaKnown RBP4.81□□□□□ -1.64
PTPRE-206ENST00000467366 ARL16Q0P5N6 197 aa4.81□□□□□ -1.64
PTPRE-206ENST00000467366 CFAP126Q5VTH2 177 aa4.81□□□□□ -1.64
PTPRE-206ENST00000467366 TEPPQ6URK8 271 aa4.81□□□□□ -1.64
PTPRE-206ENST00000467366 PQLC2Q6ZP29 291 aa4.81□□□□□ -1.64
PTPRE-206ENST00000467366 ZNF114Q8NC26 417 aa4.81□□□□□ -1.64
PTPRE-206ENST00000467366 TSKUQ8WUA8 353 aa4.81□□□□□ -1.64
PTPRE-206ENST00000467366 PHLDA1Q8WV24 401 aaPredicted RBP4.81□□□□□ -1.64
PTPRE-206ENST00000467366 CHCHD1Q96BP2 118 aaKnown RBP4.81□□□□□ -1.64
PTPRE-206ENST00000467366 FMC1Q96HJ9 113 aa4.81□□□□□ -1.64
PTPRE-206ENST00000467366 OVOL2Q9BRP0 275 aa4.81□□□□□ -1.64
PTPRE-206ENST00000467366 AP5S1Q9NUS5 200 aa4.81□□□□□ -1.64
PTPRE-206ENST00000467366 CKLFQ9UBR5 152 aa4.81□□□□□ -1.64
PTPRE-206ENST00000467366 PRO0461Q9UI25 63 aa4.81□□□□□ -1.64
PTPRE-206ENST00000467366 TRAV8-4A0A0B4J246 113 aa4.8□□□□□ -1.64
PTPRE-206ENST00000467366 PDCD6O75340 191 aa4.8□□□□□ -1.64
PTPRE-206ENST00000467366 GASTP01350 101 aa4.8□□□□□ -1.64
PTPRE-206ENST00000467366 IGKV1D-33P01593 117 aa4.8□□□□□ -1.64
PTPRE-206ENST00000467366 IGKV1-33P01594 117 aa4.8□□□□□ -1.64
PTPRE-206ENST00000467366 GYPBP06028 91 aa4.8□□□□□ -1.64
PTPRE-206ENST00000467366 RBMY1A1P0DJD3 496 aaKnown RBP4.8□□□□□ -1.64
PTPRE-206ENST00000467366 EBI3Q14213 229 aa4.8□□□□□ -1.64
PTPRE-206ENST00000467366 Q6ZRU5 148 aa4.8□□□□□ -1.64
PTPRE-206ENST00000467366 CEND1Q8N111 149 aa4.8□□□□□ -1.64
PTPRE-206ENST00000467366 Q8N9W7 124 aa4.8□□□□□ -1.64
PTPRE-206ENST00000467366 BRK1Q8WUW1 75 aa4.8□□□□□ -1.64
PTPRE-206ENST00000467366 NMNAT3Q96T66 252 aa4.8□□□□□ -1.64
PTPRE-206ENST00000467366 PARP12Q9H0J9 701 aaKnown RBP4.8□□□□□ -1.64
PTPRE-206ENST00000467366 WFDC10AQ9H1F0 79 aa4.8□□□□□ -1.64
PTPRE-206ENST00000467366 IL36BQ9NZH7 164 aa4.8□□□□□ -1.64
PTPRE-206ENST00000467366 TP53TG3Q9ULZ0 132 aa4.8□□□□□ -1.64
PTPRE-206ENST00000467366 TRAV4A0A0B4J268 109 aa4.79□□□□□ -1.64
PTPRE-206ENST00000467366 IZUMO1RA6ND01 250 aa4.79□□□□□ -1.64
PTPRE-206ENST00000467366 NCBP2LA6PVI3 153 aaKnown RBP4.79□□□□□ -1.64
PTPRE-206ENST00000467366 SNURFLB1AK76 121 aa4.79□□□□□ -1.64
PTPRE-206ENST00000467366 IGLL5B9A064 214 aa4.79□□□□□ -1.64
PTPRE-206ENST00000467366 NDUFB2O95178 105 aa4.79□□□□□ -1.64
PTPRE-206ENST00000467366 IGLV1-40P01703 118 aa4.79□□□□□ -1.64
PTPRE-206ENST00000467366 IGKCP01834 107 aa4.79□□□□□ -1.64
PTPRE-206ENST00000467366 HLA-DRB4P13762 266 aa4.79□□□□□ -1.64
PTPRE-206ENST00000467366 FXYD6P3P58550 94 aa4.79□□□□□ -1.64
PTPRE-206ENST00000467366 LINC00310P59036 64 aa4.79□□□□□ -1.64
PTPRE-206ENST00000467366 SERF2P84101 59 aa4.79□□□□□ -1.64
PTPRE-206ENST00000467366 SCGB1D4Q6XE38 83 aa4.79□□□□□ -1.64
PTPRE-206ENST00000467366 C2orf91Q6ZV80 131 aa4.79□□□□□ -1.64
PTPRE-206ENST00000467366 LHFPL1Q86WI0 220 aa4.79□□□□□ -1.64
PTPRE-206ENST00000467366 PRR15Q8IV56 129 aa4.79□□□□□ -1.64
PTPRE-206ENST00000467366 HLA-DRB4X5D2U9 266 aa4.79□□□□□ -1.64
PTPRE-206ENST00000467366 LRP1BQ9NZR2 4599 aa4.79□□□□□ -1.64
PTPRE-206ENST00000467366 RBAKDNA6NC62 111 aa4.78□□□□□ -1.64
PTPRE-206ENST00000467366 G3V318 75 aa4.78□□□□□ -1.64
PTPRE-206ENST00000467366 H3BT86 120 aa4.78□□□□□ -1.64
PTPRE-206ENST00000467366 M0R129 80 aa4.78□□□□□ -1.64
PTPRE-206ENST00000467366 LEPROTL1O95214 131 aa4.78□□□□□ -1.64
PTPRE-206ENST00000467366 CD7P09564 240 aa4.78□□□□□ -1.64
PTPRE-206ENST00000467366 MMD2Q8IY49 270 aa4.78□□□□□ -1.64
PTPRE-206ENST00000467366 Q8N6K4 173 aa4.78□□□□□ -1.64
PTPRE-206ENST00000467366 GVQW1Q8N7I0 195 aa4.78□□□□□ -1.64
PTPRE-206ENST00000467366 GPX7Q96SL4 187 aaPredicted RBP4.78□□□□□ -1.64
PTPRE-206ENST00000467366 CHCHD5Q9BSY4 110 aa4.78□□□□□ -1.64
PTPRE-206ENST00000467366 SHANK2-AS3Q9BTD1 123 aa4.78□□□□□ -1.64
PTPRE-206ENST00000467366 LY96Q9Y6Y9 160 aa4.78□□□□□ -1.64
PTPRE-206ENST00000467366 C2orf70A6NJV1 201 aa4.77□□□□□ -1.65
PTPRE-206ENST00000467366 VCYO14598 125 aa4.77□□□□□ -1.65
PTPRE-206ENST00000467366 PGLYRP1O75594 196 aaPredicted RBP4.77□□□□□ -1.65
PTPRE-206ENST00000467366 OXTP01178 125 aa4.77□□□□□ -1.65
PTPRE-206ENST00000467366 IL4P05112 153 aa4.77□□□□□ -1.65
PTPRE-206ENST00000467366 INAFM2P0DMQ5 153 aa4.77□□□□□ -1.65
PTPRE-206ENST00000467366 ATP5EP56381 51 aaPredicted RBP4.77□□□□□ -1.65
PTPRE-206ENST00000467366 RPL30P62888 115 aaKnown RBP4.77□□□□□ -1.65
PTPRE-206ENST00000467366 CCL20P78556 96 aa4.77□□□□□ -1.65
PTPRE-206ENST00000467366 LGALS9BQ3B8N2 356 aa4.77□□□□□ -1.65
PTPRE-206ENST00000467366 Q6ZS49 121 aa4.77□□□□□ -1.65
PTPRE-206ENST00000467366 LINC00305Q7Z4B0 112 aa4.77□□□□□ -1.65
PTPRE-206ENST00000467366 RNF182Q8N6D2 247 aa4.77□□□□□ -1.65
PTPRE-206ENST00000467366 CARD19Q96LW7 228 aa4.77□□□□□ -1.65
PTPRE-206ENST00000467366 C18orf15Q96N68 181 aa4.77□□□□□ -1.65
PTPRE-206ENST00000467366 HDHD3Q9BSH5 251 aaPredicted RBP4.77□□□□□ -1.65
PTPRE-206ENST00000467366 ZNF580Q9UK33 172 aa4.77□□□□□ -1.65
PTPRE-206ENST00000467366 U3KQE9 123 aa4.77□□□□□ -1.65
PTPRE-206ENST00000467366 MYCBP2O75592 4640 aa4.77□□□□□ -1.65
PTPRE-206ENST00000467366 TRAV8-1A0A0A6YYK1 113 aa4.76□□□□□ -1.65
PTPRE-206ENST00000467366 IGHV3-72A0A0B4J1Y9 119 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms