RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 KIR3DS1Q14943 382 aa10.74□□□□□ -0.69
DDX56-208ENST00000467318 LYZL1Q6UWQ5 148 aa10.74□□□□□ -0.69
DDX56-208ENST00000467318 PRSS3P2Q8NHM4 247 aa10.74□□□□□ -0.69
DDX56-208ENST00000467318 ST20Q9HBF5 79 aa10.74□□□□□ -0.69
DDX56-208ENST00000467318 U3KQK5 164 aa10.74□□□□□ -0.69
DDX56-208ENST00000467318 RNASE4P34096 147 aaKnown RBP10.73□□□□□ -0.69
DDX56-208ENST00000467318 DEFB135Q30KP9 77 aa10.73□□□□□ -0.69
DDX56-208ENST00000467318 FAM104BQ5XKR9 115 aa10.73□□□□□ -0.69
DDX56-208ENST00000467318 OR10AG1Q8NH19 301 aa10.73□□□□□ -0.69
DDX56-208ENST00000467318 RNF183Q96D59 192 aa10.73□□□□□ -0.69
DDX56-208ENST00000467318 ASCL2Q99929 193 aa10.73□□□□□ -0.69
DDX56-208ENST00000467318 AP5S1Q9NUS5 200 aa10.73□□□□□ -0.69
DDX56-208ENST00000467318 GOLT1BQ9Y3E0 138 aa10.73□□□□□ -0.69
DDX56-208ENST00000467318 SPATA25Q9BR10 227 aa10.73□□□□□ -0.69
DDX56-208ENST00000467318 TM2D3Q9BRN9 247 aa10.73□□□□□ -0.69
DDX56-208ENST00000467318 PRKDCP78527 4128 aaKnown RBP10.72□□□□□ -0.69
DDX56-208ENST00000467318 TRAV12-3A0A0B4J271 114 aa10.72□□□□□ -0.69
DDX56-208ENST00000467318 SPRY2O43597 315 aa10.72□□□□□ -0.69
DDX56-208ENST00000467318 PRR9Q5T870 116 aa10.72□□□□□ -0.69
DDX56-208ENST00000467318 ORMDL3Q8N138 153 aa10.72□□□□□ -0.69
DDX56-208ENST00000467318 FER1L6-AS1Q8NA97 138 aa10.72□□□□□ -0.69
DDX56-208ENST00000467318 TMEM208Q9BTX3 173 aa10.72□□□□□ -0.69
DDX56-208ENST00000467318 TPPP3Q9BW30 176 aa10.72□□□□□ -0.69
DDX56-208ENST00000467318 ZMAT4Q9H898 229 aa10.72□□□□□ -0.69
DDX56-208ENST00000467318 LAMTOR2Q9Y2Q5 125 aa10.72□□□□□ -0.69
DDX56-208ENST00000467318 TRAV21A0A0B4J279 112 aa10.71□□□□□ -0.69
DDX56-208ENST00000467318 GAGE1Q13065 139 aa10.71□□□□□ -0.69
DDX56-208ENST00000467318 SPATA12Q7Z6I5 190 aa10.71□□□□□ -0.69
DDX56-208ENST00000467318 C1orf158Q8N1D5 194 aa10.71□□□□□ -0.69
DDX56-208ENST00000467318 PPBPP02775 128 aa10.7□□□□□ -0.7
DDX56-208ENST00000467318 IGLC6P0CF74 106 aa10.7□□□□□ -0.7
DDX56-208ENST00000467318 NHLRC4P0CG21 123 aaPredicted RBP10.7□□□□□ -0.7
DDX56-208ENST00000467318 PRELID3AQ96N28 172 aa10.7□□□□□ -0.7
DDX56-208ENST00000467318 LINC01587Q99440 93 aa10.7□□□□□ -0.7
DDX56-208ENST00000467318 OVOL2Q9BRP0 275 aa10.7□□□□□ -0.7
DDX56-208ENST00000467318 IGHV3OR16-12A0A075B7B8 117 aa10.69□□□□□ -0.7
DDX56-208ENST00000467318 RBMY1A1P0DJD3 496 aaKnown RBP10.69□□□□□ -0.7
DDX56-208ENST00000467318 RBMY1CP0DJD4 496 aa10.69□□□□□ -0.7
DDX56-208ENST00000467318 RBMY1FQ15415 496 aaKnown RBP10.69□□□□□ -0.7
DDX56-208ENST00000467318 ATOH7Q8N100 152 aa10.69□□□□□ -0.7
DDX56-208ENST00000467318 NBEAL2Q6ZNJ1 2754 aa10.69□□□□□ -0.7
DDX56-208ENST00000467318 TMSB15BA0A087X1C1 80 aa10.69□□□□□ -0.7
DDX56-208ENST00000467318 SMIM9A6NGZ8 99 aa10.69□□□□□ -0.7
DDX56-208ENST00000467318 ORM1P02763 201 aa10.69□□□□□ -0.7
DDX56-208ENST00000467318 ZNF25P17030 456 aaPredicted RBP10.69□□□□□ -0.7
DDX56-208ENST00000467318 ZNF80P51504 273 aaPredicted RBP10.69□□□□□ -0.7
DDX56-208ENST00000467318 BATFQ16520 125 aa10.69□□□□□ -0.7
DDX56-208ENST00000467318 LINC01559Q495D7 138 aa10.69□□□□□ -0.7
DDX56-208ENST00000467318 OR11H2Q8NH07 326 aa10.69□□□□□ -0.7
DDX56-208ENST00000467318 CNFNQ9BYD5 112 aa10.69□□□□□ -0.7
DDX56-208ENST00000467318 TWIST1Q15672 202 aa10.68□□□□□ -0.7
DDX56-208ENST00000467318 LINC01545Q5VT33 79 aa10.68□□□□□ -0.7
DDX56-208ENST00000467318 FAM159AQ6UWV7 190 aa10.68□□□□□ -0.7
DDX56-208ENST00000467318 PMCHL2Q9BQD1 86 aa10.68□□□□□ -0.7
DDX56-208ENST00000467318 LINC00467Q9BRT7 94 aa10.68□□□□□ -0.7
DDX56-208ENST00000467318 D6R8Y8 96 aa10.67□□□□□ -0.7
DDX56-208ENST00000467318 CKS2P33552 79 aa10.67□□□□□ -0.7
DDX56-208ENST00000467318 MRPL51Q4U2R6 128 aaKnown RBP10.67□□□□□ -0.7
DDX56-208ENST00000467318 IGHV1OR15-1A0A075B7D0 117 aa10.66□□□□□ -0.7
DDX56-208ENST00000467318 MIFP14174 115 aa10.66□□□□□ -0.7
DDX56-208ENST00000467318 RRN3P1Q2M238 152 aa10.66□□□□□ -0.7
DDX56-208ENST00000467318 X6R8D5 127 aa10.66□□□□□ -0.7
DDX56-208ENST00000467318 DLEU1O43261 78 aa10.66□□□□□ -0.7
DDX56-208ENST00000467318 HTN1P15515 57 aa10.66□□□□□ -0.7
DDX56-208ENST00000467318 SLC25A34Q6PIV7 304 aa10.66□□□□□ -0.7
DDX56-208ENST00000467318 Q6ZQT7 251 aa10.66□□□□□ -0.7
DDX56-208ENST00000467318 SMIM15Q7Z3B0 74 aa10.66□□□□□ -0.7
DDX56-208ENST00000467318 RETNQ9HD89 108 aa10.66□□□□□ -0.7
DDX56-208ENST00000467318 IFI27P40305 119 aaPredicted RBP10.65□□□□□ -0.7
DDX56-208ENST00000467318 MAJINQ3KP22 176 aa10.65□□□□□ -0.7
DDX56-208ENST00000467318 ANXA2RQ3ZCQ2 193 aa10.65□□□□□ -0.7
DDX56-208ENST00000467318 LINC00173Q6ZV60 143 aa10.65□□□□□ -0.7
DDX56-208ENST00000467318 AMN1Q8IY45 258 aa10.65□□□□□ -0.7
DDX56-208ENST00000467318 HBDP02042 147 aa10.64□□□□□ -0.71
DDX56-208ENST00000467318 MUC21Q5SSG8 566 aa10.64□□□□□ -0.71
DDX56-208ENST00000467318 MAP1LC3AQ9H492 121 aa10.64□□□□□ -0.71
DDX56-208ENST00000467318 TENM3Q9P273 2699 aa10.64□□□□□ -0.71
DDX56-208ENST00000467318 CBY3A6NI87 242 aa10.63□□□□□ -0.71
DDX56-208ENST00000467318 G0S2P27469 103 aa10.63□□□□□ -0.71
DDX56-208ENST00000467318 CACNG7P62955 275 aa10.63□□□□□ -0.71
DDX56-208ENST00000467318 LGALS9BQ3B8N2 356 aa10.63□□□□□ -0.71
DDX56-208ENST00000467318 LGALS9CQ6DKI2 356 aa10.63□□□□□ -0.71
DDX56-208ENST00000467318 TMEM263Q8WUH6 116 aaKnown RBP10.63□□□□□ -0.71
DDX56-208ENST00000467318 DNAH9Q9NYC9 4486 aa10.63□□□□□ -0.71
DDX56-208ENST00000467318 LINC01546A6NGU7 62 aa10.63□□□□□ -0.71
DDX56-208ENST00000467318 Q8NAQ8 132 aa10.63□□□□□ -0.71
DDX56-208ENST00000467318 C16orf74Q96GX8 76 aa10.63□□□□□ -0.71
DDX56-208ENST00000467318 NXT2Q9NPJ8 142 aaKnown RBP10.63□□□□□ -0.71
DDX56-208ENST00000467318 C11orf21Q9P2W6 132 aa10.63□□□□□ -0.71
DDX56-208ENST00000467318 COL7A1Q02388 2944 aa10.62□□□□□ -0.71
DDX56-208ENST00000467318 TRGV11A0A075B6L2 103 aa10.62□□□□□ -0.71
DDX56-208ENST00000467318 IGKV3D-20A0A0C4DH25 116 aa10.62□□□□□ -0.71
DDX56-208ENST00000467318 LOC389332A0A1B0GUA5 103 aa10.62□□□□□ -0.71
DDX56-208ENST00000467318 STPG4Q8N801 248 aa10.62□□□□□ -0.71
DDX56-208ENST00000467318 RNASE8Q8TDE3 154 aaKnown RBP10.62□□□□□ -0.71
DDX56-208ENST00000467318 ORAOV1Q8WV07 137 aa10.62□□□□□ -0.71
DDX56-208ENST00000467318 SCRT2Q9NQ03 307 aa10.62□□□□□ -0.71
DDX56-208ENST00000467318 IGHV4-28A0A0C4DH34 117 aa10.61□□□□□ -0.71
DDX56-208ENST00000467318 PRM2P04554 102 aa10.61□□□□□ -0.71
DDX56-208ENST00000467318 AZU1P20160 251 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms