RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 D6R8Y8 96 aa9.3□□□□□ -0.92
COL4A1-202ENST00000467182 SMKR1H3BMG3 65 aa9.3□□□□□ -0.92
COL4A1-202ENST00000467182 RS1O15537 224 aa9.3□□□□□ -0.92
COL4A1-202ENST00000467182 SMIM15Q7Z3B0 74 aa9.3□□□□□ -0.92
COL4A1-202ENST00000467182 Q8NAQ8 132 aa9.3□□□□□ -0.92
COL4A1-202ENST00000467182 OR11H2Q8NH07 326 aa9.3□□□□□ -0.92
COL4A1-202ENST00000467182 NDUFAF3Q9BU61 184 aa9.3□□□□□ -0.92
COL4A1-202ENST00000467182 NOP10Q9NPE3 64 aaKnown RBP9.3□□□□□ -0.92
COL4A1-202ENST00000467182 HUWE1Q7Z6Z7 4374 aaKnown RBP9.3□□□□□ -0.92
COL4A1-202ENST00000467182 A0A087WWL8 130 aa9.29□□□□□ -0.92
COL4A1-202ENST00000467182 NCR2O95944 276 aa9.29□□□□□ -0.92
COL4A1-202ENST00000467182 Q0VG73 95 aa9.29□□□□□ -0.92
COL4A1-202ENST00000467182 LGALS9BQ3B8N2 356 aa9.29□□□□□ -0.92
COL4A1-202ENST00000467182 CFAP126Q5VTH2 177 aa9.29□□□□□ -0.92
COL4A1-202ENST00000467182 Q6ZTI0 123 aa9.29□□□□□ -0.92
COL4A1-202ENST00000467182 LINC00612Q8N6U2 182 aa9.29□□□□□ -0.92
COL4A1-202ENST00000467182 C18orf32Q8TCD1 76 aa9.29□□□□□ -0.92
COL4A1-202ENST00000467182 RETNQ9HD89 108 aa9.29□□□□□ -0.92
COL4A1-202ENST00000467182 TP53TG1Q9Y2A0 90 aa9.29□□□□□ -0.92
COL4A1-202ENST00000467182 DNAH9Q9NYC9 4486 aa9.28□□□□□ -0.92
COL4A1-202ENST00000467182 TRGV1A0A0A0MS02 117 aa9.28□□□□□ -0.92
COL4A1-202ENST00000467182 TRAV26-2A0A0B4J265 109 aa9.28□□□□□ -0.92
COL4A1-202ENST00000467182 IGHV4-28A0A0C4DH34 117 aa9.28□□□□□ -0.92
COL4A1-202ENST00000467182 A8MWV9 139 aa9.28□□□□□ -0.92
COL4A1-202ENST00000467182 GATA1P15976 413 aaPredicted RBP9.28□□□□□ -0.92
COL4A1-202ENST00000467182 LINC00310P59036 64 aa9.28□□□□□ -0.92
COL4A1-202ENST00000467182 IQCJQ1A5X6 159 aa9.28□□□□□ -0.92
COL4A1-202ENST00000467182 COA6Q5JTJ3 125 aaKnown RBP9.28□□□□□ -0.92
COL4A1-202ENST00000467182 NRACQ8N912 160 aa9.28□□□□□ -0.92
COL4A1-202ENST00000467182 NBEAL1Q6ZS30 2694 aa9.28□□□□□ -0.92
COL4A1-202ENST00000467182 NOTCH1P46531 2555 aa9.27□□□□□ -0.92
COL4A1-202ENST00000467182 MGAM2Q2M2H8 2515 aa9.27□□□□□ -0.93
COL4A1-202ENST00000467182 MGPP08493 103 aa9.27□□□□□ -0.93
COL4A1-202ENST00000467182 MIFP14174 115 aa9.27□□□□□ -0.93
COL4A1-202ENST00000467182 CKS2P33552 79 aa9.27□□□□□ -0.93
COL4A1-202ENST00000467182 NDUFA6P56556 154 aa9.27□□□□□ -0.93
COL4A1-202ENST00000467182 OR10J3Q5JRS4 329 aa9.27□□□□□ -0.93
COL4A1-202ENST00000467182 SBSPONQ8IVN8 264 aa9.27□□□□□ -0.93
COL4A1-202ENST00000467182 ORMDL3Q8N138 153 aa9.27□□□□□ -0.93
COL4A1-202ENST00000467182 MRAP2Q96G30 205 aa9.27□□□□□ -0.93
COL4A1-202ENST00000467182 URB1-AS1Q96HZ7 61 aa9.27□□□□□ -0.93
COL4A1-202ENST00000467182 PRELID3AQ96N28 172 aa9.27□□□□□ -0.93
COL4A1-202ENST00000467182 C5orf52A6NGY3 159 aa9.26□□□□□ -0.93
COL4A1-202ENST00000467182 NPYP01303 97 aa9.26□□□□□ -0.93
COL4A1-202ENST00000467182 PPBPP02775 128 aa9.26□□□□□ -0.93
COL4A1-202ENST00000467182 SMIM17P0DL12 118 aa9.26□□□□□ -0.93
COL4A1-202ENST00000467182 FAM74A4Q5TZK3 123 aa9.26□□□□□ -0.93
COL4A1-202ENST00000467182 SUMO4Q6EEV6 95 aa9.26□□□□□ -0.93
COL4A1-202ENST00000467182 NUPR1O60356 82 aa9.25□□□□□ -0.93
COL4A1-202ENST00000467182 EMP1P54849 157 aa9.25□□□□□ -0.93
COL4A1-202ENST00000467182 Q6ZSN1 163 aa9.25□□□□□ -0.93
COL4A1-202ENST00000467182 EDA2RQ9HAV5 297 aa9.25□□□□□ -0.93
COL4A1-202ENST00000467182 TRAV4A0A0B4J268 109 aa9.24□□□□□ -0.93
COL4A1-202ENST00000467182 GAGE12BA1L429 117 aa9.24□□□□□ -0.93
COL4A1-202ENST00000467182 LYRM9A8MSI8 78 aa9.24□□□□□ -0.93
COL4A1-202ENST00000467182 PRSS47A8MTI9 375 aa9.24□□□□□ -0.93
COL4A1-202ENST00000467182 M0QY20 66 aa9.24□□□□□ -0.93
COL4A1-202ENST00000467182 DEFB4AO15263 64 aa9.24□□□□□ -0.93
COL4A1-202ENST00000467182 GAGE7O76087 117 aa9.24□□□□□ -0.93
COL4A1-202ENST00000467182 TNFRSF6BO95407 300 aa9.24□□□□□ -0.93
COL4A1-202ENST00000467182 GAGE12FP0CL80 117 aa9.24□□□□□ -0.93
COL4A1-202ENST00000467182 GAGE12GP0CL81 117 aa9.24□□□□□ -0.93
COL4A1-202ENST00000467182 GAGE12IP0CL82 117 aa9.24□□□□□ -0.93
COL4A1-202ENST00000467182 SNRPEP62304 92 aaKnown RBP9.24□□□□□ -0.93
COL4A1-202ENST00000467182 ZFP2Q6ZN57 461 aa9.24□□□□□ -0.93
COL4A1-202ENST00000467182 RPL39LQ96EH5 51 aaKnown RBP9.24□□□□□ -0.93
COL4A1-202ENST00000467182 ZNF479Q96JC4 524 aa9.24□□□□□ -0.93
COL4A1-202ENST00000467182 C18orf15Q96N68 181 aa9.24□□□□□ -0.93
COL4A1-202ENST00000467182 TM2D3Q9BRN9 247 aa9.24□□□□□ -0.93
COL4A1-202ENST00000467182 DKK2Q9UBU2 259 aa9.24□□□□□ -0.93
COL4A1-202ENST00000467182 LAMTOR2Q9Y2Q5 125 aa9.24□□□□□ -0.93
COL4A1-202ENST00000467182 IGHV3-73A0A0B4J1V6 119 aa9.23□□□□□ -0.93
COL4A1-202ENST00000467182 RHODO00212 210 aa9.23□□□□□ -0.93
COL4A1-202ENST00000467182 HOXA5P20719 270 aa9.23□□□□□ -0.93
COL4A1-202ENST00000467182 ZNF56Q15929 161 aa9.23□□□□□ -0.93
COL4A1-202ENST00000467182 DEFB121Q5J5C9 76 aa9.23□□□□□ -0.93
COL4A1-202ENST00000467182 FAM222AQ5U5X8 452 aa9.23□□□□□ -0.93
COL4A1-202ENST00000467182 OR4C5Q8NGB2 326 aa9.23□□□□□ -0.93
COL4A1-202ENST00000467182 CELA1Q9UNI1 258 aa9.23□□□□□ -0.93
COL4A1-202ENST00000467182 NBEAL2Q6ZNJ1 2754 aa9.22□□□□□ -0.93
COL4A1-202ENST00000467182 IGLV2-18A0A075B6J9 118 aa9.22□□□□□ -0.93
COL4A1-202ENST00000467182 SERF1AO75920 110 aa9.22□□□□□ -0.93
COL4A1-202ENST00000467182 S100A6P06703 90 aa9.22□□□□□ -0.93
COL4A1-202ENST00000467182 ESDP10768 282 aa9.22□□□□□ -0.93
COL4A1-202ENST00000467182 TRBV6-5A0A0K0K1A5 114 aa9.21□□□□□ -0.94
COL4A1-202ENST00000467182 IFITM10A6NMD0 228 aa9.21□□□□□ -0.94
COL4A1-202ENST00000467182 F5H697 171 aa9.21□□□□□ -0.94
COL4A1-202ENST00000467182 IGHV3-53P01767 116 aa9.21□□□□□ -0.94
COL4A1-202ENST00000467182 NIT1Q86X76 327 aa9.21□□□□□ -0.94
COL4A1-202ENST00000467182 BAGE3Q86Y29 109 aa9.21□□□□□ -0.94
COL4A1-202ENST00000467182 HIST3H2BBQ8N257 126 aa9.21□□□□□ -0.94
COL4A1-202ENST00000467182 C11orf68Q9H3H3 251 aaKnown RBP9.21□□□□□ -0.94
COL4A1-202ENST00000467182 TRGV2A0A075B6R0 118 aa9.2□□□□□ -0.94
COL4A1-202ENST00000467182 LOC105371267A0A1B0GV96 52 aa9.2□□□□□ -0.94
COL4A1-202ENST00000467182 LINC01546A6NGU7 62 aa9.2□□□□□ -0.94
COL4A1-202ENST00000467182 P0DMU3 169 aa9.2□□□□□ -0.94
COL4A1-202ENST00000467182 FAM231AP0DMU4 169 aa9.2□□□□□ -0.94
COL4A1-202ENST00000467182 FAM231CP0DMU5 169 aa9.2□□□□□ -0.94
COL4A1-202ENST00000467182 IFI27P40305 119 aaPredicted RBP9.2□□□□□ -0.94
COL4A1-202ENST00000467182 FHL2Q14192 279 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms