RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 MPDZO75970 2070 aa6.73□□□□□ -1.33
HPS4-209ENST00000466781 TMEM89A2RUT3 159 aa6.73□□□□□ -1.33
HPS4-209ENST00000466781 I3L2K1 104 aa6.73□□□□□ -1.33
HPS4-209ENST00000466781 FBXL19-AS1Q494R0 122 aa6.73□□□□□ -1.33
HPS4-209ENST00000466781 FER1L5A0AVI2 2057 aa6.73□□□□□ -1.33
HPS4-209ENST00000466781 K7EN84 100 aa6.73□□□□□ -1.33
HPS4-209ENST00000466781 NDUFA11Q86Y39 141 aa6.73□□□□□ -1.33
HPS4-209ENST00000466781 K7EP13 123 aa6.73□□□□□ -1.33
HPS4-209ENST00000466781 Q8N1Y9 231 aa6.73□□□□□ -1.33
HPS4-209ENST00000466781 C19orf84I3L1E1 186 aa6.72□□□□□ -1.33
HPS4-209ENST00000466781 PSMB8P28062 276 aa6.72□□□□□ -1.33
HPS4-209ENST00000466781 HIGD2BQ4VC39 106 aa6.72□□□□□ -1.33
HPS4-209ENST00000466781 LRCOL1A6NCL2 159 aa6.72□□□□□ -1.33
HPS4-209ENST00000466781 DNAJC9-AS1A6NH13 148 aa6.72□□□□□ -1.33
HPS4-209ENST00000466781 GATA1P15976 413 aaPredicted RBP6.72□□□□□ -1.33
HPS4-209ENST00000466781 K7EMT4 169 aa6.72□□□□□ -1.33
HPS4-209ENST00000466781 LINC01620Q4KN68 170 aa6.72□□□□□ -1.33
HPS4-209ENST00000466781 Q8N9W7 124 aa6.72□□□□□ -1.33
HPS4-209ENST00000466781 ZNF106Q9H2Y7 1883 aaKnown RBP6.72□□□□□ -1.33
HPS4-209ENST00000466781 MUSTN1Q8IVN3 82 aa6.72□□□□□ -1.33
HPS4-209ENST00000466781 AHCTF1Q8WYP5 2266 aa6.72□□□□□ -1.33
HPS4-209ENST00000466781 Q6ZVH6 145 aa6.72□□□□□ -1.33
HPS4-209ENST00000466781 RITA1Q96K30 269 aa6.72□□□□□ -1.33
HPS4-209ENST00000466781 PHF3Q92576 2039 aaKnown RBP6.71□□□□□ -1.33
HPS4-209ENST00000466781 A0A0B4J2C4 111 aa6.71□□□□□ -1.33
HPS4-209ENST00000466781 HILS1P60008 231 aa6.71□□□□□ -1.33
HPS4-209ENST00000466781 TMEM61Q8N0U2 210 aa6.71□□□□□ -1.33
HPS4-209ENST00000466781 KIR2DL5BQ8NHK3 375 aa6.71□□□□□ -1.33
HPS4-209ENST00000466781 C1orf147Q96MC9 270 aaPredicted RBP6.71□□□□□ -1.33
HPS4-209ENST00000466781 C11orf53Q8IXP5 236 aa6.71□□□□□ -1.34
HPS4-209ENST00000466781 TMEM263Q8WUH6 116 aaKnown RBP6.71□□□□□ -1.34
HPS4-209ENST00000466781 FGF23Q9GZV9 251 aaPredicted RBP6.71□□□□□ -1.34
HPS4-209ENST00000466781 USP34Q70CQ2 3546 aa6.71□□□□□ -1.34
HPS4-209ENST00000466781 IGKV2-24A0A0C4DH68 120 aa6.7□□□□□ -1.34
HPS4-209ENST00000466781 K7EIM0 57 aa6.7□□□□□ -1.34
HPS4-209ENST00000466781 IGKV4-1P06312 121 aa6.7□□□□□ -1.34
HPS4-209ENST00000466781 HEATR1Q9H583 2144 aaKnown RBP6.7□□□□□ -1.34
HPS4-209ENST00000466781 DENND4AQ7Z401 1863 aa6.7□□□□□ -1.34
HPS4-209ENST00000466781 SPTA1P02549 2419 aa6.7□□□□□ -1.34
HPS4-209ENST00000466781 MUC22E2RYF6 1773 aaPredicted RBP6.7□□□□□ -1.34
HPS4-209ENST00000466781 CASC2Q6XLA1 102 aa6.7□□□□□ -1.34
HPS4-209ENST00000466781 DEFB125Q8N687 156 aa6.7□□□□□ -1.34
HPS4-209ENST00000466781 ZDBF2Q9HCK1 2354 aa6.7□□□□□ -1.34
HPS4-209ENST00000466781 A0A0J9YXV3 536 aa6.7□□□□□ -1.34
HPS4-209ENST00000466781 ZNF747Q9BV97 191 aa6.7□□□□□ -1.34
HPS4-209ENST00000466781 IGKV3D-7A0A0C4DH55 119 aa6.7□□□□□ -1.34
HPS4-209ENST00000466781 KRTAP27-1Q3LI81 207 aa6.7□□□□□ -1.34
HPS4-209ENST00000466781 PRO0255Q9UI72 69 aa6.7□□□□□ -1.34
HPS4-209ENST00000466781 IGLV3-1P01715 115 aa6.69□□□□□ -1.34
HPS4-209ENST00000466781 CTSGP08311 255 aa6.69□□□□□ -1.34
HPS4-209ENST00000466781 LOXL1Q08397 574 aaPredicted RBP6.69□□□□□ -1.34
HPS4-209ENST00000466781 CCL25O15444 150 aa6.69□□□□□ -1.34
HPS4-209ENST00000466781 COX7BP24311 80 aa6.69□□□□□ -1.34
HPS4-209ENST00000466781 WI2-2373I1.2A0A1W2PRP0 233 aa6.69□□□□□ -1.34
HPS4-209ENST00000466781 MED14OSP0DP75 135 aa6.69□□□□□ -1.34
HPS4-209ENST00000466781 JMJD7-PLA2G4BH0Y9G9 81 aa6.69□□□□□ -1.34
HPS4-209ENST00000466781 NDUFS6O75380 124 aaKnown RBP6.69□□□□□ -1.34
HPS4-209ENST00000466781 TRBV12-3P01733 135 aa6.69□□□□□ -1.34
HPS4-209ENST00000466781 DAND5Q8N907 189 aa6.69□□□□□ -1.34
HPS4-209ENST00000466781 SDK2Q58EX2 2172 aa6.68□□□□□ -1.34
HPS4-209ENST00000466781 NCKAP5O14513 1909 aa6.68□□□□□ -1.34
HPS4-209ENST00000466781 IGKV1-17P01599 117 aa6.68□□□□□ -1.34
HPS4-209ENST00000466781 CRYGDP07320 174 aa6.68□□□□□ -1.34
HPS4-209ENST00000466781 PCP2Q8IVA1 136 aa6.68□□□□□ -1.34
HPS4-209ENST00000466781 MAP6D1Q9H9H5 199 aa6.68□□□□□ -1.34
HPS4-209ENST00000466781 TOMM6Q96B49 74 aa6.68□□□□□ -1.34
HPS4-209ENST00000466781 SPATA25Q9BR10 227 aa6.68□□□□□ -1.34
HPS4-209ENST00000466781 NDUFC2O95298 119 aa6.67□□□□□ -1.34
HPS4-209ENST00000466781 MAJINQ3KP22 176 aa6.67□□□□□ -1.34
HPS4-209ENST00000466781 RPL39P62891 51 aaKnown RBP6.67□□□□□ -1.34
HPS4-209ENST00000466781 WFDC11Q8NEX6 87 aa6.67□□□□□ -1.34
HPS4-209ENST00000466781 MED12Q93074 2177 aa6.67□□□□□ -1.34
HPS4-209ENST00000466781 EYSQ5T1H1 3165 aa6.67□□□□□ -1.34
HPS4-209ENST00000466781 LECT2O14960 151 aa6.67□□□□□ -1.34
HPS4-209ENST00000466781 IGHV4-31P0DP07 118 aa6.67□□□□□ -1.34
HPS4-209ENST00000466781 UBE2D1P51668 147 aa6.67□□□□□ -1.34
HPS4-209ENST00000466781 C7orf33Q8WU49 177 aa6.67□□□□□ -1.34
HPS4-209ENST00000466781 NUP210LQ5VU65 1888 aa6.67□□□□□ -1.34
HPS4-209ENST00000466781 TMEM256-PLSCR3K7ERE1 68 aa6.67□□□□□ -1.34
HPS4-209ENST00000466781 A4D1N5 150 aa6.67□□□□□ -1.34
HPS4-209ENST00000466781 A6NDX4 124 aa6.67□□□□□ -1.34
HPS4-209ENST00000466781 ATOX1O00244 68 aa6.67□□□□□ -1.34
HPS4-209ENST00000466781 TECTAO75443 2155 aa6.67□□□□□ -1.34
HPS4-209ENST00000466781 FAM19A1Q7Z5A9 133 aa6.66□□□□□ -1.34
HPS4-209ENST00000466781 TRAV26-1A0A087WT03 109 aa6.66□□□□□ -1.34
HPS4-209ENST00000466781 SMIM20Q8N5G0 67 aa6.66□□□□□ -1.34
HPS4-209ENST00000466781 MIR7-3HGQ8N6C7 128 aa6.66□□□□□ -1.34
HPS4-209ENST00000466781 HIGD2AQ9BW72 106 aa6.66□□□□□ -1.34
HPS4-209ENST00000466781 A0A087WZ39 114 aa6.66□□□□□ -1.34
HPS4-209ENST00000466781 TEX22C9J3V5 150 aa6.66□□□□□ -1.34
HPS4-209ENST00000466781 SIRPDQ9H106 197 aa6.66□□□□□ -1.34
HPS4-209ENST00000466781 DIDO1Q9BTC0 2240 aaKnown RBP6.66□□□□□ -1.34
HPS4-209ENST00000466781 INAFM1C9JVW0 142 aa6.65□□□□□ -1.34
HPS4-209ENST00000466781 PRAC2D3DTV9 90 aa6.65□□□□□ -1.34
HPS4-209ENST00000466781 RTTNQ86VV8 2226 aa6.65□□□□□ -1.34
HPS4-209ENST00000466781 Q8N7P7 452 aa6.65□□□□□ -1.34
HPS4-209ENST00000466781 CDH23Q9H251 3354 aa6.65□□□□□ -1.34
HPS4-209ENST00000466781 DEFB131BA0A096LNP1 70 aa6.65□□□□□ -1.34
HPS4-209ENST00000466781 TRBV10-2A0A0K0K1G8 114 aa6.65□□□□□ -1.34
HPS4-209ENST00000466781 C11orf86A6NJI1 115 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms