RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 MRPL23Q16540 153 aaKnown RBP9.66□□□□□ -0.86
UBA3-209ENST00000466763 LYZL1Q6UWQ5 148 aa9.66□□□□□ -0.86
UBA3-209ENST00000466763 FAM231DQ6ZW35 169 aa9.66□□□□□ -0.86
UBA3-209ENST00000466763 PRADC1Q9BSG0 188 aa9.66□□□□□ -0.86
UBA3-209ENST00000466763 A0A1W2PPQ1 181 aa9.65□□□□□ -0.86
UBA3-209ENST00000466763 F2Z2F3 143 aa9.65□□□□□ -0.86
UBA3-209ENST00000466763 RHODO00212 210 aa9.65□□□□□ -0.86
UBA3-209ENST00000466763 SRIP30626 198 aa9.65□□□□□ -0.86
UBA3-209ENST00000466763 RPL23P62829 140 aaKnown RBP9.65□□□□□ -0.86
UBA3-209ENST00000466763 ZFP2Q6ZN57 461 aa9.65□□□□□ -0.86
UBA3-209ENST00000466763 C15orf54Q8N8G6 183 aa9.65□□□□□ -0.86
UBA3-209ENST00000466763 SLC25A29Q8N8R3 303 aa9.65□□□□□ -0.86
UBA3-209ENST00000466763 ALMS1Q8TCU4 4167 aa9.65□□□□□ -0.87
UBA3-209ENST00000466763 TRBV6-4A0A1B0GX49 114 aa9.64□□□□□ -0.87
UBA3-209ENST00000466763 A8MWL6 223 aa9.64□□□□□ -0.87
UBA3-209ENST00000466763 K7EQD1 137 aa9.64□□□□□ -0.87
UBA3-209ENST00000466763 SMIM17P0DL12 118 aa9.64□□□□□ -0.87
UBA3-209ENST00000466763 CACNG7P62955 275 aa9.64□□□□□ -0.87
UBA3-209ENST00000466763 RHOHQ15669 191 aa9.64□□□□□ -0.87
UBA3-209ENST00000466763 RNF212Q495C1 297 aa9.64□□□□□ -0.87
UBA3-209ENST00000466763 Q6ZSN1 163 aa9.64□□□□□ -0.87
UBA3-209ENST00000466763 C14orf178Q8N769 122 aaPredicted RBP9.64□□□□□ -0.87
UBA3-209ENST00000466763 ISOC2Q96AB3 205 aa9.64□□□□□ -0.87
UBA3-209ENST00000466763 OSTCQ9NRP0 149 aa9.64□□□□□ -0.87
UBA3-209ENST00000466763 IGLV2-18A0A075B6J9 118 aa9.63□□□□□ -0.87
UBA3-209ENST00000466763 F5H697 171 aa9.63□□□□□ -0.87
UBA3-209ENST00000466763 NXPH4O95158 308 aa9.63□□□□□ -0.87
UBA3-209ENST00000466763 CRYGDP07320 174 aa9.63□□□□□ -0.87
UBA3-209ENST00000466763 ZNF56Q15929 161 aa9.63□□□□□ -0.87
UBA3-209ENST00000466763 ESRGQ1W209 222 aa9.63□□□□□ -0.87
UBA3-209ENST00000466763 NEGR1Q7Z3B1 354 aa9.63□□□□□ -0.87
UBA3-209ENST00000466763 OR10G8Q8NGN5 311 aa9.63□□□□□ -0.87
UBA3-209ENST00000466763 PGLYRP4Q96LB8 373 aa9.63□□□□□ -0.87
UBA3-209ENST00000466763 AP1S3Q96PC3 154 aa9.63□□□□□ -0.87
UBA3-209ENST00000466763 MSRB1Q9NZV6 116 aa9.63□□□□□ -0.87
UBA3-209ENST00000466763 LINC00588Q9Y4M8 146 aa9.63□□□□□ -0.87
UBA3-209ENST00000466763 MGPP08493 103 aa9.62□□□□□ -0.87
UBA3-209ENST00000466763 NTF3P20783 257 aa9.62□□□□□ -0.87
UBA3-209ENST00000466763 TWIST1Q15672 202 aa9.62□□□□□ -0.87
UBA3-209ENST00000466763 UFSP1Q6NVU6 142 aa9.62□□□□□ -0.87
UBA3-209ENST00000466763 KMT2CQ8NEZ4 4911 aaKnown RBP9.62□□□□□ -0.87
UBA3-209ENST00000466763 LYSTQ99698 3801 aa9.61□□□□□ -0.87
UBA3-209ENST00000466763 GAGE12JA6NER3 117 aa9.61□□□□□ -0.87
UBA3-209ENST00000466763 M0R2N4 97 aa9.61□□□□□ -0.87
UBA3-209ENST00000466763 GAGE1Q13065 139 aa9.61□□□□□ -0.87
UBA3-209ENST00000466763 GAGE4Q13068 117 aa9.61□□□□□ -0.87
UBA3-209ENST00000466763 GAGE5Q13069 117 aa9.61□□□□□ -0.87
UBA3-209ENST00000466763 GAGE13Q4V321 117 aa9.61□□□□□ -0.87
UBA3-209ENST00000466763 CT83Q5H943 113 aa9.61□□□□□ -0.87
UBA3-209ENST00000466763 COMMD7Q86VX2 200 aa9.61□□□□□ -0.87
UBA3-209ENST00000466763 GTSF1Q8WW33 167 aa9.61□□□□□ -0.87
UBA3-209ENST00000466763 BORCS7Q96B45 105 aa9.61□□□□□ -0.87
UBA3-209ENST00000466763 TRGC1P0CF51 173 aa9.6□□□□□ -0.87
UBA3-209ENST00000466763 CTRLP40313 264 aa9.6□□□□□ -0.87
UBA3-209ENST00000466763 LYPD5Q6UWN5 251 aa9.6□□□□□ -0.87
UBA3-209ENST00000466763 TSKUQ8WUA8 353 aa9.6□□□□□ -0.87
UBA3-209ENST00000466763 V9GYV3 84 aa9.6□□□□□ -0.87
UBA3-209ENST00000466763 FAM3BP58499 235 aaPredicted RBP9.59□□□□□ -0.87
UBA3-209ENST00000466763 RAB4BP61018 213 aa9.59□□□□□ -0.87
UBA3-209ENST00000466763 WDR73Q6P4I2 378 aa9.59□□□□□ -0.87
UBA3-209ENST00000466763 UQCC3Q6UW78 93 aa9.59□□□□□ -0.87
UBA3-209ENST00000466763 SH2D6Q7Z4S9 175 aa9.59□□□□□ -0.87
UBA3-209ENST00000466763 ATP6V0E2Q8NHE4 81 aa9.59□□□□□ -0.87
UBA3-209ENST00000466763 MRPS16Q9Y3D3 137 aaKnown RBP9.59□□□□□ -0.87
UBA3-209ENST00000466763 HIGD1CA8MV81 97 aa9.58□□□□□ -0.88
UBA3-209ENST00000466763 EVI2AP22794 236 aa9.58□□□□□ -0.88
UBA3-209ENST00000466763 SMIM15Q7Z3B0 74 aa9.58□□□□□ -0.88
UBA3-209ENST00000466763 ZNRF2Q8NHG8 242 aa9.58□□□□□ -0.88
UBA3-209ENST00000466763 Q9UF83 564 aa9.58□□□□□ -0.88
UBA3-209ENST00000466763 F8W036 122 aa9.57□□□□□ -0.88
UBA3-209ENST00000466763 GFRA4Q9GZZ7 299 aa9.57□□□□□ -0.88
UBA3-209ENST00000466763 DPH3P1Q9H4G8 78 aa9.57□□□□□ -0.88
UBA3-209ENST00000466763 Q9H8V8 135 aa9.57□□□□□ -0.88
UBA3-209ENST00000466763 KIF25-AS1Q9Y6Z4 181 aa9.57□□□□□ -0.88
UBA3-209ENST00000466763 DNAH1Q9P2D7 4330 aa9.56□□□□□ -0.88
UBA3-209ENST00000466763 TMEM218A2RU14 115 aa9.56□□□□□ -0.88
UBA3-209ENST00000466763 FOXA3P55318 350 aaPredicted RBP9.56□□□□□ -0.88
UBA3-209ENST00000466763 RPL36AP83881 106 aaKnown RBP9.56□□□□□ -0.88
UBA3-209ENST00000466763 Q8N3U1 123 aa9.56□□□□□ -0.88
UBA3-209ENST00000466763 RPL36ALQ969Q0 106 aaKnown RBP9.56□□□□□ -0.88
UBA3-209ENST00000466763 SACSQ9NZJ4 4579 aa9.55□□□□□ -0.88
UBA3-209ENST00000466763 A0A1B0GUT8 65 aa9.55□□□□□ -0.88
UBA3-209ENST00000466763 LINC00862A6NCI5 91 aa9.55□□□□□ -0.88
UBA3-209ENST00000466763 FAM231BA6NCW3 169 aa9.55□□□□□ -0.88
UBA3-209ENST00000466763 PNRC1Q12796 327 aaPredicted RBP9.55□□□□□ -0.88
UBA3-209ENST00000466763 CNFNQ9BYD5 112 aa9.55□□□□□ -0.88
UBA3-209ENST00000466763 NAT8BQ9UHF3 227 aa9.55□□□□□ -0.88
UBA3-209ENST00000466763 TRBV10-1A0A0K0K1A3 114 aa9.54□□□□□ -0.88
UBA3-209ENST00000466763 PPP1R2P9O14990 202 aa9.54□□□□□ -0.88
UBA3-209ENST00000466763 SIVA1O15304 175 aa9.54□□□□□ -0.88
UBA3-209ENST00000466763 LINC00315P59091 139 aa9.54□□□□□ -0.88
UBA3-209ENST00000466763 RIGQ13278 110 aa9.54□□□□□ -0.88
UBA3-209ENST00000466763 SUMO4Q6EEV6 95 aa9.54□□□□□ -0.88
UBA3-209ENST00000466763 NUP35Q8NFH5 326 aa9.54□□□□□ -0.88
UBA3-209ENST00000466763 UPK3BQ9BT76 320 aa9.54□□□□□ -0.88
UBA3-209ENST00000466763 KRTAP4-8Q9BYQ9 185 aa9.54□□□□□ -0.88
UBA3-209ENST00000466763 GTSF1LQ9H1H1 148 aa9.54□□□□□ -0.88
UBA3-209ENST00000466763 RYR2Q92736 4967 aa9.54□□□□□ -0.88
UBA3-209ENST00000466763 TRBV7-3A0A075B6L6 115 aa9.53□□□□□ -0.88
UBA3-209ENST00000466763 TRAV8-6A0A0B4J262 113 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms