RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 SPINK8P0C7L1 97 aa-0.08□□□□□ -2.42
CHMP2B-202ENST00000466696 HLA-DRB4P13762 266 aa-0.08□□□□□ -2.42
CHMP2B-202ENST00000466696 DEFB109BQ30KR1 87 aa-0.08□□□□□ -2.42
CHMP2B-202ENST00000466696 CCDC153Q494R4 210 aa-0.08□□□□□ -2.42
CHMP2B-202ENST00000466696 OR2T2Q6IF00 324 aa-0.08□□□□□ -2.42
CHMP2B-202ENST00000466696 TMEM91Q6ZNR0 172 aa-0.08□□□□□ -2.42
CHMP2B-202ENST00000466696 Q6ZRX8 168 aa-0.08□□□□□ -2.42
CHMP2B-202ENST00000466696 MMGT1Q8N4V1 131 aa-0.08□□□□□ -2.42
CHMP2B-202ENST00000466696 PSMG3Q9BT73 122 aaPredicted RBP-0.08□□□□□ -2.42
CHMP2B-202ENST00000466696 RPRMQ9NS64 109 aa-0.08□□□□□ -2.42
CHMP2B-202ENST00000466696 HLA-DRB4X5D2U9 266 aa-0.08□□□□□ -2.42
CHMP2B-202ENST00000466696 KDM5CP41229 1560 aa-0.08□□□□□ -2.42
CHMP2B-202ENST00000466696 PTPRQQ9UMZ3 2332 aa-0.08□□□□□ -2.42
CHMP2B-202ENST00000466696 AFDNP55196 1824 aaKnown RBP-0.08□□□□□ -2.42
CHMP2B-202ENST00000466696 LRP5O75197 1615 aa-0.09□□□□□ -2.42
CHMP2B-202ENST00000466696 UHRF1BP1LA0JNW5 1464 aa-0.09□□□□□ -2.42
CHMP2B-202ENST00000466696 APC2O95996 2303 aa-0.09□□□□□ -2.42
CHMP2B-202ENST00000466696 PKDREJQ9NTG1 2253 aa-0.09□□□□□ -2.42
CHMP2B-202ENST00000466696 DOPEY2Q9Y3R5 2298 aa-0.09□□□□□ -2.42
CHMP2B-202ENST00000466696 ANK2Q01484 3957 aa-0.09□□□□□ -2.42
CHMP2B-202ENST00000466696 FXYD6-FXYD2A0A087WZ82 144 aa-0.09□□□□□ -2.42
CHMP2B-202ENST00000466696 CXorf51AA0A1B0GTR3 108 aa-0.09□□□□□ -2.42
CHMP2B-202ENST00000466696 PIN1P1O15428 100 aa-0.09□□□□□ -2.42
CHMP2B-202ENST00000466696 DBIP07108 87 aaKnown RBP-0.09□□□□□ -2.42
CHMP2B-202ENST00000466696 WFDC2Q14508 124 aa-0.09□□□□□ -2.42
CHMP2B-202ENST00000466696 INSL4Q14641 139 aa-0.09□□□□□ -2.42
CHMP2B-202ENST00000466696 SPANXN1Q5VSR9 72 aa-0.09□□□□□ -2.42
CHMP2B-202ENST00000466696 TMEM244Q5VVB8 128 aa-0.09□□□□□ -2.42
CHMP2B-202ENST00000466696 ATP11AUNQ6ZP68 121 aa-0.09□□□□□ -2.42
CHMP2B-202ENST00000466696 SSBP3-AS1Q7Z2R9 100 aa-0.09□□□□□ -2.42
CHMP2B-202ENST00000466696 CNFNQ9BYD5 112 aa-0.09□□□□□ -2.42
CHMP2B-202ENST00000466696 SPCS1Q9Y6A9 102 aa-0.09□□□□□ -2.42
CHMP2B-202ENST00000466696 NINQ8N4C6 2090 aa-0.09□□□□□ -2.42
CHMP2B-202ENST00000466696 DLEC1Q9Y238 1755 aa-0.09□□□□□ -2.42
CHMP2B-202ENST00000466696 TANC1Q9C0D5 1861 aa-0.1□□□□□ -2.42
CHMP2B-202ENST00000466696 ARHGAP31Q2M1Z3 1444 aa-0.1□□□□□ -2.43
CHMP2B-202ENST00000466696 TRAV36DV7A0A075B6V5 113 aa-0.1□□□□□ -2.43
CHMP2B-202ENST00000466696 TRGV1A0A0A0MS02 117 aa-0.1□□□□□ -2.43
CHMP2B-202ENST00000466696 TRAV1-2A0A0B4J238 106 aa-0.1□□□□□ -2.43
CHMP2B-202ENST00000466696 PIGBOS1A0A0B4J2F0 54 aa-0.1□□□□□ -2.43
CHMP2B-202ENST00000466696 TRBV10-3A0A0K0K1G6 114 aa-0.1□□□□□ -2.43
CHMP2B-202ENST00000466696 J3QR89 54 aa-0.1□□□□□ -2.43
CHMP2B-202ENST00000466696 PIPP12273 146 aaPredicted RBP-0.1□□□□□ -2.43
CHMP2B-202ENST00000466696 EDDM3BP56851 147 aa-0.1□□□□□ -2.43
CHMP2B-202ENST00000466696 Q8IZM0 81 aa-0.1□□□□□ -2.43
CHMP2B-202ENST00000466696 AIF1LQ9BQI0 150 aa-0.1□□□□□ -2.43
CHMP2B-202ENST00000466696 CYP4F30PQ9H0H9 118 aa-0.1□□□□□ -2.43
CHMP2B-202ENST00000466696 SAR1AQ9NR31 198 aa-0.1□□□□□ -2.43
CHMP2B-202ENST00000466696 GINS2Q9Y248 185 aa-0.1□□□□□ -2.43
CHMP2B-202ENST00000466696 DNAJC15Q9Y5T4 150 aa-0.1□□□□□ -2.43
CHMP2B-202ENST00000466696 ANKRD31Q8N7Z5 1873 aa-0.1□□□□□ -2.43
CHMP2B-202ENST00000466696 NUP210Q8TEM1 1887 aaPredicted RBP-0.1□□□□□ -2.43
CHMP2B-202ENST00000466696 TRPM7Q96QT4 1865 aa-0.1□□□□□ -2.43
CHMP2B-202ENST00000466696 TNS1Q9HBL0 1735 aaKnown RBP-0.1□□□□□ -2.43
CHMP2B-202ENST00000466696 GNG14A0A1W2PPG7 69 aa-0.11□□□□□ -2.43
CHMP2B-202ENST00000466696 LOC730098B7Z3J9 87 aa-0.11□□□□□ -2.43
CHMP2B-202ENST00000466696 SNCGO76070 127 aa-0.11□□□□□ -2.43
CHMP2B-202ENST00000466696 TNFSF15O95150 251 aa-0.11□□□□□ -2.43
CHMP2B-202ENST00000466696 NPC2P61916 151 aa-0.11□□□□□ -2.43
CHMP2B-202ENST00000466696 DCDP81605 110 aaKnown RBP-0.11□□□□□ -2.43
CHMP2B-202ENST00000466696 SPAG11BQ08648 103 aa-0.11□□□□□ -2.43
CHMP2B-202ENST00000466696 KRTAP6-1Q3LI64 71 aa-0.11□□□□□ -2.43
CHMP2B-202ENST00000466696 BAGE3Q86Y29 109 aa-0.11□□□□□ -2.43
CHMP2B-202ENST00000466696 VSTM2AQ8TAG5 236 aa-0.11□□□□□ -2.43
CHMP2B-202ENST00000466696 LZICQ8WZA0 190 aa-0.11□□□□□ -2.43
CHMP2B-202ENST00000466696 DDA1Q9BW61 102 aa-0.11□□□□□ -2.43
CHMP2B-202ENST00000466696 SCN3BQ9NY72 215 aa-0.11□□□□□ -2.43
CHMP2B-202ENST00000466696 HIGD1AQ9Y241 93 aa-0.11□□□□□ -2.43
CHMP2B-202ENST00000466696 MAP1BP46821 2468 aaKnown RBP-0.11□□□□□ -2.43
CHMP2B-202ENST00000466696 ZNF609O15014 1411 aa-0.12□□□□□ -2.43
CHMP2B-202ENST00000466696 A0A1B0GX51 115 aa-0.12□□□□□ -2.43
CHMP2B-202ENST00000466696 H0YJX3 145 aa-0.12□□□□□ -2.43
CHMP2B-202ENST00000466696 M0R2P5 195 aa-0.12□□□□□ -2.43
CHMP2B-202ENST00000466696 IL5P05113 134 aa-0.12□□□□□ -2.43
CHMP2B-202ENST00000466696 SCTP09683 121 aa-0.12□□□□□ -2.43
CHMP2B-202ENST00000466696 PIRTP0C851 137 aa-0.12□□□□□ -2.43
CHMP2B-202ENST00000466696 RPS28P62857 69 aaKnown RBP-0.12□□□□□ -2.43
CHMP2B-202ENST00000466696 LINC01545Q5VT33 79 aa-0.12□□□□□ -2.43
CHMP2B-202ENST00000466696 CFAP126Q5VTH2 177 aa-0.12□□□□□ -2.43
CHMP2B-202ENST00000466696 SPTSSBQ8NFR3 76 aa-0.12□□□□□ -2.43
CHMP2B-202ENST00000466696 SPTSSAQ969W0 71 aa-0.12□□□□□ -2.43
CHMP2B-202ENST00000466696 Q96NJ1 140 aa-0.12□□□□□ -2.43
CHMP2B-202ENST00000466696 NDUFA12Q9UI09 145 aa-0.12□□□□□ -2.43
CHMP2B-202ENST00000466696 LSM2Q9Y333 95 aaKnown RBP-0.12□□□□□ -2.43
CHMP2B-202ENST00000466696 KIDINS220Q9ULH0 1771 aa-0.12□□□□□ -2.43
CHMP2B-202ENST00000466696 CELSR1Q9NYQ6 3014 aa-0.12□□□□□ -2.43
CHMP2B-202ENST00000466696 STAB1Q9NY15 2570 aa-0.12□□□□□ -2.43
CHMP2B-202ENST00000466696 DAPK1P53355 1430 aa-0.13□□□□□ -2.43
CHMP2B-202ENST00000466696 NHSL1Q5SYE7 1610 aa-0.13□□□□□ -2.43
CHMP2B-202ENST00000466696 VIRMAQ69YN4 1812 aaKnown RBP-0.13□□□□□ -2.43
CHMP2B-202ENST00000466696 CELSR2Q9HCU4 2923 aa-0.13□□□□□ -2.43
CHMP2B-202ENST00000466696 ERCC6Q03468 1493 aa-0.13□□□□□ -2.43
CHMP2B-202ENST00000466696 TRBV20-1A0A075B6N2 111 aa-0.13□□□□□ -2.43
CHMP2B-202ENST00000466696 A0A087WTM6 91 aa-0.13□□□□□ -2.43
CHMP2B-202ENST00000466696 M0R2Z0 102 aa-0.13□□□□□ -2.43
CHMP2B-202ENST00000466696 RRAS2P62070 204 aaPredicted RBP-0.13□□□□□ -2.43
CHMP2B-202ENST00000466696 HAMPP81172 84 aa-0.13□□□□□ -2.43
CHMP2B-202ENST00000466696 HIST1H1AQ02539 215 aaPredicted RBP-0.13□□□□□ -2.43
CHMP2B-202ENST00000466696 Q5VSD8 79 aa-0.13□□□□□ -2.43
CHMP2B-202ENST00000466696 SMIM4Q8WVI0 70 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms