RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 FAM74A4Q5TZK3 123 aa10.06□□□□□ -0.8
DNMT3A-208ENST00000466601 WDR73Q6P4I2 378 aa10.06□□□□□ -0.8
DNMT3A-208ENST00000466601 TSKUQ8WUA8 353 aa10.06□□□□□ -0.8
DNMT3A-208ENST00000466601 GTSF1Q8WW33 167 aa10.06□□□□□ -0.8
DNMT3A-208ENST00000466601 ICOSQ9Y6W8 199 aa10.06□□□□□ -0.8
DNMT3A-208ENST00000466601 V9GYV3 84 aa10.06□□□□□ -0.8
DNMT3A-208ENST00000466601 A0A096LPF7 62 aa10.05□□□□□ -0.8
DNMT3A-208ENST00000466601 TRBV6-4A0A1B0GX49 114 aa10.05□□□□□ -0.8
DNMT3A-208ENST00000466601 TMEM218A2RU14 115 aa10.05□□□□□ -0.8
DNMT3A-208ENST00000466601 GYPEP15421 78 aa10.05□□□□□ -0.8
DNMT3A-208ENST00000466601 MRPL23Q16540 153 aaKnown RBP10.05□□□□□ -0.8
DNMT3A-208ENST00000466601 Q6ZSN1 163 aa10.05□□□□□ -0.8
DNMT3A-208ENST00000466601 SLC25A29Q8N8R3 303 aa10.05□□□□□ -0.8
DNMT3A-208ENST00000466601 PRADC1Q9BSG0 188 aa10.05□□□□□ -0.8
DNMT3A-208ENST00000466601 MSRB1Q9NZV6 116 aa10.05□□□□□ -0.8
DNMT3A-208ENST00000466601 ALMS1Q8TCU4 4167 aa10.04□□□□□ -0.8
DNMT3A-208ENST00000466601 LOC100131303A0A0U1RQF7 123 aa10.04□□□□□ -0.8
DNMT3A-208ENST00000466601 NTF3P20783 257 aa10.04□□□□□ -0.8
DNMT3A-208ENST00000466601 FOXA3P55318 350 aaPredicted RBP10.04□□□□□ -0.8
DNMT3A-208ENST00000466601 PNRC1Q12796 327 aaPredicted RBP10.04□□□□□ -0.8
DNMT3A-208ENST00000466601 RHOHQ15669 191 aa10.04□□□□□ -0.8
DNMT3A-208ENST00000466601 C14orf178Q8N769 122 aaPredicted RBP10.04□□□□□ -0.8
DNMT3A-208ENST00000466601 PGLYRP4Q96LB8 373 aa10.04□□□□□ -0.8
DNMT3A-208ENST00000466601 AP1S3Q96PC3 154 aa10.04□□□□□ -0.8
DNMT3A-208ENST00000466601 GFRA4Q9GZZ7 299 aa10.04□□□□□ -0.8
DNMT3A-208ENST00000466601 SACSQ9NZJ4 4579 aa10.04□□□□□ -0.8
DNMT3A-208ENST00000466601 FAM231BA6NCW3 169 aa10.03□□□□□ -0.8
DNMT3A-208ENST00000466601 K7EQD1 137 aa10.03□□□□□ -0.8
DNMT3A-208ENST00000466601 SMIM17P0DL12 118 aa10.03□□□□□ -0.8
DNMT3A-208ENST00000466601 UBE2DNLQ8IWF7 75 aa10.03□□□□□ -0.8
DNMT3A-208ENST00000466601 CNFNQ9BYD5 112 aa10.03□□□□□ -0.8
DNMT3A-208ENST00000466601 DNAH1Q9P2D7 4330 aa10.03□□□□□ -0.8
DNMT3A-208ENST00000466601 HIGD1CA8MV81 97 aa10.02□□□□□ -0.81
DNMT3A-208ENST00000466601 F8W036 122 aa10.02□□□□□ -0.81
DNMT3A-208ENST00000466601 TRGC1P0CF51 173 aa10.02□□□□□ -0.81
DNMT3A-208ENST00000466601 ADCYAP1P18509 176 aa10.02□□□□□ -0.81
DNMT3A-208ENST00000466601 SRIP30626 198 aa10.02□□□□□ -0.81
DNMT3A-208ENST00000466601 CCL18P55774 89 aa10.02□□□□□ -0.81
DNMT3A-208ENST00000466601 TWIST1Q15672 202 aa10.02□□□□□ -0.81
DNMT3A-208ENST00000466601 RNF212Q495C1 297 aa10.02□□□□□ -0.81
DNMT3A-208ENST00000466601 KIF25-AS1Q9Y6Z4 181 aa10.02□□□□□ -0.81
DNMT3A-208ENST00000466601 RAB4BP61018 213 aa10.01□□□□□ -0.81
DNMT3A-208ENST00000466601 ZNF56Q15929 161 aa10.01□□□□□ -0.81
DNMT3A-208ENST00000466601 ESRGQ1W209 222 aa10.01□□□□□ -0.81
DNMT3A-208ENST00000466601 NEGR1Q7Z3B1 354 aa10.01□□□□□ -0.81
DNMT3A-208ENST00000466601 BORCS7Q96B45 105 aa10.01□□□□□ -0.81
DNMT3A-208ENST00000466601 LYSTQ99698 3801 aa10.01□□□□□ -0.81
DNMT3A-208ENST00000466601 F5H697 171 aa10□□□□□ -0.81
DNMT3A-208ENST00000466601 PPP1R2P9O14990 202 aa10□□□□□ -0.81
DNMT3A-208ENST00000466601 EVI2AP22794 236 aa10□□□□□ -0.81
DNMT3A-208ENST00000466601 LINC00315P59091 139 aa10□□□□□ -0.81
DNMT3A-208ENST00000466601 SEC11CQ9BY50 192 aa10□□□□□ -0.81
DNMT3A-208ENST00000466601 NAT8BQ9UHF3 227 aa10□□□□□ -0.81
DNMT3A-208ENST00000466601 LINC00588Q9Y4M8 146 aa10□□□□□ -0.81
DNMT3A-208ENST00000466601 VPS13DQ5THJ4 4388 aa10□□□□□ -0.81
DNMT3A-208ENST00000466601 RYR2Q92736 4967 aa9.99□□□□□ -0.81
DNMT3A-208ENST00000466601 HYDINQ4G0P3 5121 aa9.99□□□□□ -0.81
DNMT3A-208ENST00000466601 A0A1B0GUT8 65 aa9.99□□□□□ -0.81
DNMT3A-208ENST00000466601 SMIM27A0A1W2PRY6 76 aa9.99□□□□□ -0.81
DNMT3A-208ENST00000466601 MGPP08493 103 aa9.99□□□□□ -0.81
DNMT3A-208ENST00000466601 LYPD5Q6UWN5 251 aa9.99□□□□□ -0.81
DNMT3A-208ENST00000466601 SH2D6Q7Z4S9 175 aa9.99□□□□□ -0.81
DNMT3A-208ENST00000466601 NUP35Q8NFH5 326 aa9.99□□□□□ -0.81
DNMT3A-208ENST00000466601 DPH3P1Q9H4G8 78 aa9.99□□□□□ -0.81
DNMT3A-208ENST00000466601 Q9UF83 564 aa9.99□□□□□ -0.81
DNMT3A-208ENST00000466601 RYR3Q15413 4870 aa9.99□□□□□ -0.81
DNMT3A-208ENST00000466601 GAGE12JA6NER3 117 aa9.98□□□□□ -0.81
DNMT3A-208ENST00000466601 MT-ND4LP03901 98 aa9.98□□□□□ -0.81
DNMT3A-208ENST00000466601 FAM3BP58499 235 aaPredicted RBP9.98□□□□□ -0.81
DNMT3A-208ENST00000466601 GAGE1Q13065 139 aa9.98□□□□□ -0.81
DNMT3A-208ENST00000466601 GAGE4Q13068 117 aa9.98□□□□□ -0.81
DNMT3A-208ENST00000466601 GAGE5Q13069 117 aa9.98□□□□□ -0.81
DNMT3A-208ENST00000466601 GAGE13Q4V321 117 aa9.98□□□□□ -0.81
DNMT3A-208ENST00000466601 SMIM15Q7Z3B0 74 aa9.98□□□□□ -0.81
DNMT3A-208ENST00000466601 ANAPC16Q96DE5 110 aa9.98□□□□□ -0.81
DNMT3A-208ENST00000466601 TRBV10-1A0A0K0K1A3 114 aa9.97□□□□□ -0.81
DNMT3A-208ENST00000466601 RIGQ13278 110 aa9.97□□□□□ -0.81
DNMT3A-208ENST00000466601 MRPS16Q9Y3D3 137 aaKnown RBP9.97□□□□□ -0.81
DNMT3A-208ENST00000466601 LINC00694P0DN24 101 aa9.96□□□□□ -0.82
DNMT3A-208ENST00000466601 C10orf91Q5T1B1 145 aa9.96□□□□□ -0.82
DNMT3A-208ENST00000466601 ATP6V0E2Q8NHE4 81 aa9.96□□□□□ -0.82
DNMT3A-208ENST00000466601 ZNRF2Q8NHG8 242 aa9.96□□□□□ -0.82
DNMT3A-208ENST00000466601 RPL36AP83881 106 aaKnown RBP9.95□□□□□ -0.82
DNMT3A-208ENST00000466601 SUMO4Q6EEV6 95 aa9.95□□□□□ -0.82
DNMT3A-208ENST00000466601 RPL36ALQ969Q0 106 aaKnown RBP9.95□□□□□ -0.82
DNMT3A-208ENST00000466601 UPK3BQ9BT76 320 aa9.95□□□□□ -0.82
DNMT3A-208ENST00000466601 CARHSP1Q9Y2V2 147 aaKnown RBP9.95□□□□□ -0.82
DNMT3A-208ENST00000466601 TRBV7-3A0A075B6L6 115 aa9.94□□□□□ -0.82
DNMT3A-208ENST00000466601 H7C1H1 209 aa9.94□□□□□ -0.82
DNMT3A-208ENST00000466601 M0QY20 66 aa9.94□□□□□ -0.82
DNMT3A-208ENST00000466601 TIRAPP58753 221 aa9.94□□□□□ -0.82
DNMT3A-208ENST00000466601 NEXN-AS1Q8NBZ9 246 aa9.94□□□□□ -0.82
DNMT3A-208ENST00000466601 IGLV2-18A0A075B6J9 118 aa9.93□□□□□ -0.82
DNMT3A-208ENST00000466601 TMEM191AQ9H0A3 160 aa9.93□□□□□ -0.82
DNMT3A-208ENST00000466601 GTSF1LQ9H1H1 148 aa9.93□□□□□ -0.82
DNMT3A-208ENST00000466601 Q9H8V8 135 aa9.93□□□□□ -0.82
DNMT3A-208ENST00000466601 UBE2D3P61077 147 aa9.92□□□□□ -0.82
DNMT3A-208ENST00000466601 UBE2D2P62837 147 aa9.92□□□□□ -0.82
DNMT3A-208ENST00000466601 RASL11AQ6T310 242 aa9.92□□□□□ -0.82
DNMT3A-208ENST00000466601 CTDSP1Q9GZU7 261 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms