RNA–Protein interactions for RNA: ENST00000466596.5

HS3ST3B1-202, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 3B1, humanhuman

TSL 2

Gene HS3ST3B1, Length 2,808 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3B1-202ENST00000466596 USP9YO00507 2555 aaPredicted RBP11.3□□□□□ -0.6
HS3ST3B1-202ENST00000466596 USP9XQ93008 2570 aaPredicted RBP11.3□□□□□ -0.6
HS3ST3B1-202ENST00000466596 IGLV4-69A0A075B6H9 119 aa11.3□□□□□ -0.6
HS3ST3B1-202ENST00000466596 NDUFA11Q86Y39 141 aa11.3□□□□□ -0.6
HS3ST3B1-202ENST00000466596 A0A0J9YY99 117 aa11.29□□□□□ -0.6
HS3ST3B1-202ENST00000466596 TMEM170BQ5T4T1 132 aa11.29□□□□□ -0.6
HS3ST3B1-202ENST00000466596 GPHB5Q86YW7 130 aa11.29□□□□□ -0.6
HS3ST3B1-202ENST00000466596 RAX2Q96IS3 184 aa11.29□□□□□ -0.6
HS3ST3B1-202ENST00000466596 SCGB1C2P0DMR2 95 aa11.28□□□□□ -0.6
HS3ST3B1-202ENST00000466596 UBE2D3P61077 147 aa11.28□□□□□ -0.6
HS3ST3B1-202ENST00000466596 UBE2D2P62837 147 aa11.28□□□□□ -0.6
HS3ST3B1-202ENST00000466596 LY6EQ16553 131 aa11.28□□□□□ -0.6
HS3ST3B1-202ENST00000466596 F5H697 171 aa11.28□□□□□ -0.6
HS3ST3B1-202ENST00000466596 IGKV3-20P01619 116 aa11.28□□□□□ -0.6
HS3ST3B1-202ENST00000466596 CFC1BP0CG36 223 aa11.28□□□□□ -0.6
HS3ST3B1-202ENST00000466596 CFC1P0CG37 223 aa11.28□□□□□ -0.6
HS3ST3B1-202ENST00000466596 LMO4P61968 165 aa11.28□□□□□ -0.6
HS3ST3B1-202ENST00000466596 FAM74A4Q5TZK3 123 aa11.28□□□□□ -0.6
HS3ST3B1-202ENST00000466596 ZFYVE26Q68DK2 2539 aa11.28□□□□□ -0.6
HS3ST3B1-202ENST00000466596 RNASE3P12724 160 aaKnown RBP11.27□□□□□ -0.6
HS3ST3B1-202ENST00000466596 C1orf122Q6ZSJ8 110 aa11.27□□□□□ -0.6
HS3ST3B1-202ENST00000466596 TRAV21A0A0B4J279 112 aa11.27□□□□□ -0.61
HS3ST3B1-202ENST00000466596 MINOS1Q5TGZ0 78 aa11.27□□□□□ -0.61
HS3ST3B1-202ENST00000466596 ITLN2Q8WWU7 325 aaPredicted RBP11.27□□□□□ -0.61
HS3ST3B1-202ENST00000466596 MINOS1-NBL1R4GNA1 71 aa11.27□□□□□ -0.61
HS3ST3B1-202ENST00000466596 CENPVL3A0A0U1RRI6 287 aa11.27□□□□□ -0.61
HS3ST3B1-202ENST00000466596 CRIP2P52943 208 aaPredicted RBP11.27□□□□□ -0.61
HS3ST3B1-202ENST00000466596 ANKRD29Q8N6D5 301 aa11.27□□□□□ -0.61
HS3ST3B1-202ENST00000466596 OR10J6PQ8NGY7 276 aa11.27□□□□□ -0.61
HS3ST3B1-202ENST00000466596 RNF183Q96D59 192 aa11.27□□□□□ -0.61
HS3ST3B1-202ENST00000466596 U3KQE9 123 aa11.27□□□□□ -0.61
HS3ST3B1-202ENST00000466596 C2CD3Q4AC94 2353 aa11.26□□□□□ -0.61
HS3ST3B1-202ENST00000466596 MYO18BQ8IUG5 2567 aa11.26□□□□□ -0.61
HS3ST3B1-202ENST00000466596 UBE2E1P51965 193 aa11.26□□□□□ -0.61
HS3ST3B1-202ENST00000466596 TEN1Q86WV5 123 aa11.26□□□□□ -0.61
HS3ST3B1-202ENST00000466596 ZNRF2Q8NHG8 242 aa11.26□□□□□ -0.61
HS3ST3B1-202ENST00000466596 MRPL53Q96EL3 112 aaKnown RBP11.26□□□□□ -0.61
HS3ST3B1-202ENST00000466596 ZNF256Q9Y2P7 627 aaPredicted RBP11.26□□□□□ -0.61
HS3ST3B1-202ENST00000466596 NACAE9PAV3 2078 aa11.26□□□□□ -0.61
HS3ST3B1-202ENST00000466596 TRPT1Q86TN4 253 aaKnown RBP11.26□□□□□ -0.61
HS3ST3B1-202ENST00000466596 ATP6V0E2Q8NHE4 81 aa11.26□□□□□ -0.61
HS3ST3B1-202ENST00000466596 PPDPFLQ8WWR9 84 aa11.26□□□□□ -0.61
HS3ST3B1-202ENST00000466596 NPFFO15130 113 aa11.25□□□□□ -0.61
HS3ST3B1-202ENST00000466596 CACNA1AO00555 2505 aa11.25□□□□□ -0.61
HS3ST3B1-202ENST00000466596 IGHV3-30P01768 117 aa11.25□□□□□ -0.61
HS3ST3B1-202ENST00000466596 IGHV3-30-5P0DP03 117 aa11.25□□□□□ -0.61
HS3ST3B1-202ENST00000466596 C9orf139Q6ZV77 190 aa11.25□□□□□ -0.61
HS3ST3B1-202ENST00000466596 ZNF580Q9UK33 172 aa11.25□□□□□ -0.61
HS3ST3B1-202ENST00000466596 C5orf56Q8N8D9 126 aa11.24□□□□□ -0.61
HS3ST3B1-202ENST00000466596 TRBV7-1A0A0A6YYK4 115 aa11.24□□□□□ -0.61
HS3ST3B1-202ENST00000466596 A8MWV9 139 aa11.24□□□□□ -0.61
HS3ST3B1-202ENST00000466596 OOSP1A8MZH6 123 aa11.24□□□□□ -0.61
HS3ST3B1-202ENST00000466596 IGIPA6NJ69 53 aa11.23□□□□□ -0.61
HS3ST3B1-202ENST00000466596 ADARB2-AS1A8MUL3 147 aa11.23□□□□□ -0.61
HS3ST3B1-202ENST00000466596 EIF4EBP3O60516 100 aaPredicted RBP11.23□□□□□ -0.61
HS3ST3B1-202ENST00000466596 SHISA2Q6UWI4 295 aa11.23□□□□□ -0.61
HS3ST3B1-202ENST00000466596 LINC00315P59091 139 aa11.23□□□□□ -0.61
HS3ST3B1-202ENST00000466596 HERVK_113P61574 105 aa11.23□□□□□ -0.61
HS3ST3B1-202ENST00000466596 SUMO4Q6EEV6 95 aa11.23□□□□□ -0.61
HS3ST3B1-202ENST00000466596 LINC00477Q96M19 166 aa11.23□□□□□ -0.61
HS3ST3B1-202ENST00000466596 PIEZO1Q92508 2521 aa11.23□□□□□ -0.61
HS3ST3B1-202ENST00000466596 C9JAW5 83 aa11.22□□□□□ -0.61
HS3ST3B1-202ENST00000466596 IGHV4-38-2P0DP08 117 aa11.22□□□□□ -0.61
HS3ST3B1-202ENST00000466596 GNLYP22749 145 aa11.22□□□□□ -0.61
HS3ST3B1-202ENST00000466596 PMVKQ15126 192 aa11.22□□□□□ -0.61
HS3ST3B1-202ENST00000466596 C10orf126Q8N4M7 172 aa11.22□□□□□ -0.61
HS3ST3B1-202ENST00000466596 BEX4Q9NWD9 120 aaPredicted RBP11.22□□□□□ -0.61
HS3ST3B1-202ENST00000466596 IGHV4-39P01824 125 aa11.22□□□□□ -0.61
HS3ST3B1-202ENST00000466596 TRAV2A0A0B4J234 112 aa11.22□□□□□ -0.61
HS3ST3B1-202ENST00000466596 A4D1N5 150 aa11.22□□□□□ -0.61
HS3ST3B1-202ENST00000466596 TRAV12-2A0A075B6T6 113 aa11.21□□□□□ -0.61
HS3ST3B1-202ENST00000466596 TRAV12-3A0A0B4J271 114 aa11.21□□□□□ -0.61
HS3ST3B1-202ENST00000466596 ELANEP08246 267 aa11.21□□□□□ -0.61
HS3ST3B1-202ENST00000466596 IGSF10Q6WRI0 2623 aa11.21□□□□□ -0.61
HS3ST3B1-202ENST00000466596 TRAV41A0A0B4J266 112 aa11.21□□□□□ -0.62
HS3ST3B1-202ENST00000466596 SDHAF1A6NFY7 115 aa11.21□□□□□ -0.62
HS3ST3B1-202ENST00000466596 J3QQQ9 107 aa11.21□□□□□ -0.62
HS3ST3B1-202ENST00000466596 ZNF688P0C7X2 276 aa11.21□□□□□ -0.62
HS3ST3B1-202ENST00000466596 SLC25A29Q8N8R3 303 aa11.21□□□□□ -0.62
HS3ST3B1-202ENST00000466596 PRO1854Q9UHT4 67 aa11.21□□□□□ -0.62
HS3ST3B1-202ENST00000466596 KIF25-AS1Q9Y6Z4 181 aa11.21□□□□□ -0.62
HS3ST3B1-202ENST00000466596 IGHV4-61A0A0C4DH41 118 aa11.2□□□□□ -0.62
HS3ST3B1-202ENST00000466596 SOCS3O14543 225 aa11.2□□□□□ -0.62
HS3ST3B1-202ENST00000466596 AMELXQ99217 191 aa11.2□□□□□ -0.62
HS3ST3B1-202ENST00000466596 FAM208BQ5VWN6 2430 aa11.2□□□□□ -0.62
HS3ST3B1-202ENST00000466596 BLCAPP62952 87 aa11.2□□□□□ -0.62
HS3ST3B1-202ENST00000466596 MXRA5Q9NR99 2828 aa11.2□□□□□ -0.62
HS3ST3B1-202ENST00000466596 LGALS3P17931 250 aaKnown RBP11.19□□□□□ -0.62
HS3ST3B1-202ENST00000466596 SS18L2Q9UHA2 77 aa11.19□□□□□ -0.62
HS3ST3B1-202ENST00000466596 LENEPQ9Y5L5 61 aa11.19□□□□□ -0.62
HS3ST3B1-202ENST00000466596 OVOL1O14753 267 aa11.19□□□□□ -0.62
HS3ST3B1-202ENST00000466596 SLC25A20O43772 301 aa11.19□□□□□ -0.62
HS3ST3B1-202ENST00000466596 POLR2KP53803 58 aaKnown RBP11.19□□□□□ -0.62
HS3ST3B1-202ENST00000466596 NRGNQ92686 78 aa11.19□□□□□ -0.62
HS3ST3B1-202ENST00000466596 FBN2P35556 2912 aa11.19□□□□□ -0.62
HS3ST3B1-202ENST00000466596 RNASE13Q5GAN3 156 aaKnown RBP11.18□□□□□ -0.62
HS3ST3B1-202ENST00000466596 LYRM7Q5U5X0 104 aa11.18□□□□□ -0.62
HS3ST3B1-202ENST00000466596 ANAPC13Q9BS18 74 aa11.18□□□□□ -0.62
HS3ST3B1-202ENST00000466596 PF4V1P10720 104 aa11.18□□□□□ -0.62
HS3ST3B1-202ENST00000466596 NPC2P61916 151 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms