RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 CHD3Q12873 2000 aaKnown RBP1.22□□□□□ -2.21
CDC42BPA-211ENST00000466538 DLEC1Q9Y238 1755 aa1.22□□□□□ -2.21
CDC42BPA-211ENST00000466538 A0A1W2PRS3 328 aa1.22□□□□□ -2.21
CDC42BPA-211ENST00000466538 NUPR1O60356 82 aa1.22□□□□□ -2.21
CDC42BPA-211ENST00000466538 SNCGO76070 127 aa1.22□□□□□ -2.21
CDC42BPA-211ENST00000466538 SLC25A6P12236 298 aa1.22□□□□□ -2.21
CDC42BPA-211ENST00000466538 MPV17LQ2QL34 196 aa1.22□□□□□ -2.21
CDC42BPA-211ENST00000466538 SPRNQ5BIV9 151 aa1.22□□□□□ -2.21
CDC42BPA-211ENST00000466538 NCMAPQ5T1S8 102 aa1.22□□□□□ -2.21
CDC42BPA-211ENST00000466538 RPL7L1Q6DKI1 246 aaKnown RBP1.22□□□□□ -2.21
CDC42BPA-211ENST00000466538 UNQ5815/PRO19632Q6UWF5 114 aa1.22□□□□□ -2.21
CDC42BPA-211ENST00000466538 GTF2H5Q6ZYL4 71 aa1.22□□□□□ -2.21
CDC42BPA-211ENST00000466538 ACBD7Q8N6N7 88 aa1.22□□□□□ -2.21
CDC42BPA-211ENST00000466538 OBSCN-AS1Q96MR7 158 aa1.22□□□□□ -2.21
CDC42BPA-211ENST00000466538 TMEM242Q9NWH2 141 aa1.22□□□□□ -2.21
CDC42BPA-211ENST00000466538 FBN3Q75N90 2809 aa1.21□□□□□ -2.22
CDC42BPA-211ENST00000466538 CHD1O14646 1710 aa1.21□□□□□ -2.22
CDC42BPA-211ENST00000466538 KMT2BQ9UMN6 2715 aaPredicted RBP1.21□□□□□ -2.22
CDC42BPA-211ENST00000466538 TET3O43151 1660 aa1.21□□□□□ -2.22
CDC42BPA-211ENST00000466538 TOPAZ1Q8N9V7 1692 aa1.21□□□□□ -2.22
CDC42BPA-211ENST00000466538 TRAV17A0A0B4J275 112 aa1.21□□□□□ -2.22
CDC42BPA-211ENST00000466538 TMEM218A2RU14 115 aa1.21□□□□□ -2.22
CDC42BPA-211ENST00000466538 NUPR2A6NF83 97 aa1.21□□□□□ -2.22
CDC42BPA-211ENST00000466538 MPC2O95563 127 aa1.21□□□□□ -2.22
CDC42BPA-211ENST00000466538 IGKCP01834 107 aa1.21□□□□□ -2.22
CDC42BPA-211ENST00000466538 IL5P05113 134 aa1.21□□□□□ -2.22
CDC42BPA-211ENST00000466538 PIPP12273 146 aaPredicted RBP1.21□□□□□ -2.22
CDC42BPA-211ENST00000466538 INSL4Q14641 139 aa1.21□□□□□ -2.22
CDC42BPA-211ENST00000466538 RHOHQ15669 191 aa1.21□□□□□ -2.22
CDC42BPA-211ENST00000466538 GDF5OSQ5U4N7 250 aa1.21□□□□□ -2.22
CDC42BPA-211ENST00000466538 MRPL54Q6P161 138 aaKnown RBP1.21□□□□□ -2.22
CDC42BPA-211ENST00000466538 LYPD5Q6UWN5 251 aa1.21□□□□□ -2.22
CDC42BPA-211ENST00000466538 SPTSSAQ969W0 71 aa1.21□□□□□ -2.22
CDC42BPA-211ENST00000466538 SNHG12Q9BXW3 62 aa1.21□□□□□ -2.22
CDC42BPA-211ENST00000466538 CDC42SE1Q9NRR8 79 aa1.21□□□□□ -2.22
CDC42BPA-211ENST00000466538 PHIPQ8WWQ0 1821 aa1.21□□□□□ -2.22
CDC42BPA-211ENST00000466538 TROQ12816 1431 aaPredicted RBP1.21□□□□□ -2.22
CDC42BPA-211ENST00000466538 RB1CC1Q8TDY2 1594 aa1.21□□□□□ -2.22
CDC42BPA-211ENST00000466538 MYH8P13535 1937 aa1.21□□□□□ -2.22
CDC42BPA-211ENST00000466538 TECTAO75443 2155 aa1.2□□□□□ -2.22
CDC42BPA-211ENST00000466538 APOC4-APOC2K7ER74 178 aa1.2□□□□□ -2.22
CDC42BPA-211ENST00000466538 NDUFB6O95139 128 aa1.2□□□□□ -2.22
CDC42BPA-211ENST00000466538 DNAL4O96015 105 aa1.2□□□□□ -2.22
CDC42BPA-211ENST00000466538 IFNA17P01571 189 aa1.2□□□□□ -2.22
CDC42BPA-211ENST00000466538 IGHV3-30P01768 117 aa1.2□□□□□ -2.22
CDC42BPA-211ENST00000466538 APOC2P02655 101 aa1.2□□□□□ -2.22
CDC42BPA-211ENST00000466538 GYPBP06028 91 aa1.2□□□□□ -2.22
CDC42BPA-211ENST00000466538 IGHV3-30-5P0DP03 117 aa1.2□□□□□ -2.22
CDC42BPA-211ENST00000466538 PDE6GP18545 87 aa1.2□□□□□ -2.22
CDC42BPA-211ENST00000466538 POLR2JP52435 117 aaKnown RBP1.2□□□□□ -2.22
CDC42BPA-211ENST00000466538 C9orf153Q5TBE3 101 aa1.2□□□□□ -2.22
CDC42BPA-211ENST00000466538 SPANXN1Q5VSR9 72 aa1.2□□□□□ -2.22
CDC42BPA-211ENST00000466538 C8orf59Q8N0T1 100 aaPredicted RBP1.2□□□□□ -2.22
CDC42BPA-211ENST00000466538 TSKUQ8WUA8 353 aa1.2□□□□□ -2.22
CDC42BPA-211ENST00000466538 PPDPFLQ8WWR9 84 aa1.2□□□□□ -2.22
CDC42BPA-211ENST00000466538 TMEM14CQ9P0S9 112 aa1.2□□□□□ -2.22
CDC42BPA-211ENST00000466538 KIAA1551Q9HCM1 1747 aa1.2□□□□□ -2.22
CDC42BPA-211ENST00000466538 KTN1Q86UP2 1357 aaKnown RBP1.2□□□□□ -2.22
CDC42BPA-211ENST00000466538 TET1Q8NFU7 2136 aa1.19□□□□□ -2.22
CDC42BPA-211ENST00000466538 ADGRL2O95490 1459 aa1.19□□□□□ -2.22
CDC42BPA-211ENST00000466538 IFT140Q96RY7 1462 aa1.19□□□□□ -2.22
CDC42BPA-211ENST00000466538 DLG5Q8TDM6 1919 aa1.19□□□□□ -2.22
CDC42BPA-211ENST00000466538 IGLV3-32A0A0A0MS00 114 aa1.19□□□□□ -2.22
CDC42BPA-211ENST00000466538 TFF1P04155 84 aa1.19□□□□□ -2.22
CDC42BPA-211ENST00000466538 PRB4P10163 310 aaPredicted RBP1.19□□□□□ -2.22
CDC42BPA-211ENST00000466538 DAPK1P53355 1430 aa1.19□□□□□ -2.22
CDC42BPA-211ENST00000466538 IQCJQ1A5X6 159 aa1.19□□□□□ -2.22
CDC42BPA-211ENST00000466538 SLC48A1Q6P1K1 146 aa1.19□□□□□ -2.22
CDC42BPA-211ENST00000466538 LINC00299Q6ZSB3 139 aa1.19□□□□□ -2.22
CDC42BPA-211ENST00000466538 DEFB132Q7Z7B7 95 aa1.19□□□□□ -2.22
CDC42BPA-211ENST00000466538 SVBPQ8N300 66 aa1.19□□□□□ -2.22
CDC42BPA-211ENST00000466538 TTC9CQ8N5M4 171 aa1.19□□□□□ -2.22
CDC42BPA-211ENST00000466538 ARAP2Q8WZ64 1704 aa1.19□□□□□ -2.22
CDC42BPA-211ENST00000466538 TMEM141Q96I45 108 aa1.19□□□□□ -2.22
CDC42BPA-211ENST00000466538 NWD2Q9ULI1 1742 aa1.19□□□□□ -2.22
CDC42BPA-211ENST00000466538 RREB1Q92766 1687 aa1.19□□□□□ -2.22
CDC42BPA-211ENST00000466538 ARHGAP5Q13017 1502 aa1.19□□□□□ -2.22
CDC42BPA-211ENST00000466538 CDK12Q9NYV4 1490 aaPredicted RBP1.18□□□□□ -2.22
CDC42BPA-211ENST00000466538 NRXN2Q9P2S2 1712 aa1.18□□□□□ -2.22
CDC42BPA-211ENST00000466538 ZGRF1Q86YA3 2104 aa1.18□□□□□ -2.22
CDC42BPA-211ENST00000466538 CPSF1Q10570 1443 aaKnown RBP1.18□□□□□ -2.22
CDC42BPA-211ENST00000466538 TMEM30CPA0ZSE6 113 aa1.18□□□□□ -2.22
CDC42BPA-211ENST00000466538 M0R143 59 aa1.18□□□□□ -2.22
CDC42BPA-211ENST00000466538 SPINK8P0C7L1 97 aa1.18□□□□□ -2.22
CDC42BPA-211ENST00000466538 IFITM1P13164 125 aa1.18□□□□□ -2.22
CDC42BPA-211ENST00000466538 IL7P13232 177 aa1.18□□□□□ -2.22
CDC42BPA-211ENST00000466538 NPC2P61916 151 aa1.18□□□□□ -2.22
CDC42BPA-211ENST00000466538 PKIAP61925 76 aa1.18□□□□□ -2.22
CDC42BPA-211ENST00000466538 C9orf116Q5BN46 136 aaPredicted RBP1.18□□□□□ -2.22
CDC42BPA-211ENST00000466538 SBSPONQ8IVN8 264 aa1.18□□□□□ -2.22
CDC42BPA-211ENST00000466538 TNS1Q9HBL0 1735 aaKnown RBP1.18□□□□□ -2.22
CDC42BPA-211ENST00000466538 E9PCH4 1651 aa1.17□□□□□ -2.22
CDC42BPA-211ENST00000466538 C10orf71Q711Q0 1435 aa1.17□□□□□ -2.22
CDC42BPA-211ENST00000466538 TRAV23DV6A0A075B6W5 121 aa1.17□□□□□ -2.22
CDC42BPA-211ENST00000466538 TRBV10-1A0A0K0K1A3 114 aa1.17□□□□□ -2.22
CDC42BPA-211ENST00000466538 NBDYA0A0U1RRE5 68 aa1.17□□□□□ -2.22
CDC42BPA-211ENST00000466538 CLPSL1A2RUU4 121 aa1.17□□□□□ -2.22
CDC42BPA-211ENST00000466538 JMJD7-PLA2G4BH0Y9G9 81 aa1.17□□□□□ -2.22
CDC42BPA-211ENST00000466538 PPYP01298 95 aa1.17□□□□□ -2.22
CDC42BPA-211ENST00000466538 UBE2G1P62253 170 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms