RNA–Protein interactions for RNA: ENST00000466348.5

PDZRN3-204, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-204ENST00000466348 ZNF664Q8N3J9 261 aa7.87□□□□□ -1.15
PDZRN3-204ENST00000466348 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.87□□□□□ -1.15
PDZRN3-204ENST00000466348 RASL10AQ92737 203 aa7.87□□□□□ -1.15
PDZRN3-204ENST00000466348 VAMP8Q9BV40 100 aa7.87□□□□□ -1.15
PDZRN3-204ENST00000466348 SMIM2Q9BVW6 85 aa7.87□□□□□ -1.15
PDZRN3-204ENST00000466348 OTOGQ6ZRI0 2925 aa7.87□□□□□ -1.15
PDZRN3-204ENST00000466348 AKAP9Q99996 3911 aa7.87□□□□□ -1.15
PDZRN3-204ENST00000466348 ANK3Q12955 4377 aaKnown RBP7.86□□□□□ -1.15
PDZRN3-204ENST00000466348 MUC4Q99102 2169 aa7.86□□□□□ -1.15
PDZRN3-204ENST00000466348 RHODO00212 210 aa7.86□□□□□ -1.15
PDZRN3-204ENST00000466348 ATP5LO75964 103 aa7.86□□□□□ -1.15
PDZRN3-204ENST00000466348 CRYGDP07320 174 aa7.86□□□□□ -1.15
PDZRN3-204ENST00000466348 MGPP08493 103 aa7.86□□□□□ -1.15
PDZRN3-204ENST00000466348 RBMY1A1P0DJD3 496 aaKnown RBP7.86□□□□□ -1.15
PDZRN3-204ENST00000466348 RBMY1CP0DJD4 496 aa7.86□□□□□ -1.15
PDZRN3-204ENST00000466348 RBMY1FQ15415 496 aaKnown RBP7.86□□□□□ -1.15
PDZRN3-204ENST00000466348 CDPF1Q6NVV7 123 aa7.86□□□□□ -1.15
PDZRN3-204ENST00000466348 GTSCR1Q86UQ5 136 aa7.86□□□□□ -1.15
PDZRN3-204ENST00000466348 WFDC9Q8NEX5 89 aa7.86□□□□□ -1.15
PDZRN3-204ENST00000466348 TMEM208Q9BTX3 173 aa7.86□□□□□ -1.15
PDZRN3-204ENST00000466348 ST20Q9HBF5 79 aa7.86□□□□□ -1.15
PDZRN3-204ENST00000466348 GOLT1BQ9Y3E0 138 aa7.86□□□□□ -1.15
PDZRN3-204ENST00000466348 WNK1Q9H4A3 2382 aa7.85□□□□□ -1.15
PDZRN3-204ENST00000466348 A0A096LNJ9 63 aa7.85□□□□□ -1.15
PDZRN3-204ENST00000466348 F5H697 171 aa7.85□□□□□ -1.15
PDZRN3-204ENST00000466348 VCYO14598 125 aa7.85□□□□□ -1.15
PDZRN3-204ENST00000466348 CIDEAO60543 219 aa7.85□□□□□ -1.15
PDZRN3-204ENST00000466348 GATA1P15976 413 aaPredicted RBP7.85□□□□□ -1.15
PDZRN3-204ENST00000466348 LINC01545Q5VT33 79 aa7.85□□□□□ -1.15
PDZRN3-204ENST00000466348 C11orf72Q8NBR9 251 aa7.85□□□□□ -1.15
PDZRN3-204ENST00000466348 XCL2Q9UBD3 114 aa7.85□□□□□ -1.15
PDZRN3-204ENST00000466348 TRAV9-2A0A087WT02 112 aa7.84□□□□□ -1.15
PDZRN3-204ENST00000466348 TRAV26-2A0A0B4J265 109 aa7.84□□□□□ -1.15
PDZRN3-204ENST00000466348 KIR2DL5BA0A0G2JN68 375 aa7.84□□□□□ -1.15
PDZRN3-204ENST00000466348 KIR2DL5BA0A0G2JPC4 375 aa7.84□□□□□ -1.15
PDZRN3-204ENST00000466348 WIPF1O43516 503 aa7.84□□□□□ -1.15
PDZRN3-204ENST00000466348 GAS8-AS1O95177 125 aa7.84□□□□□ -1.15
PDZRN3-204ENST00000466348 POLR2KP53803 58 aaKnown RBP7.84□□□□□ -1.15
PDZRN3-204ENST00000466348 LGALS9BQ3B8N2 356 aa7.84□□□□□ -1.15
PDZRN3-204ENST00000466348 ZFP2Q6ZN57 461 aa7.84□□□□□ -1.15
PDZRN3-204ENST00000466348 KIR2DL5AQ8N109 375 aa7.84□□□□□ -1.15
PDZRN3-204ENST00000466348 C1orf158Q8N1D5 194 aa7.84□□□□□ -1.15
PDZRN3-204ENST00000466348 IFI27L1Q96BM0 104 aa7.84□□□□□ -1.15
PDZRN3-204ENST00000466348 C2CD3Q4AC94 2353 aa7.84□□□□□ -1.15
PDZRN3-204ENST00000466348 TRBV27A0A0K0K1C4 114 aa7.83□□□□□ -1.16
PDZRN3-204ENST00000466348 M0QY20 66 aa7.83□□□□□ -1.16
PDZRN3-204ENST00000466348 HTN1P15515 57 aa7.83□□□□□ -1.16
PDZRN3-204ENST00000466348 DDTP30046 118 aa7.83□□□□□ -1.16
PDZRN3-204ENST00000466348 LGALS9CQ6DKI2 356 aa7.83□□□□□ -1.16
PDZRN3-204ENST00000466348 SUMO4Q6EEV6 95 aa7.83□□□□□ -1.16
PDZRN3-204ENST00000466348 TMEM263Q8WUH6 116 aaKnown RBP7.83□□□□□ -1.16
PDZRN3-204ENST00000466348 KIR2DL4Q99706 377 aa7.83□□□□□ -1.16
PDZRN3-204ENST00000466348 HIVEP1P15822 2718 aa7.83□□□□□ -1.16
PDZRN3-204ENST00000466348 NSD1Q96L73 2696 aaPredicted RBP7.83□□□□□ -1.16
PDZRN3-204ENST00000466348 NF1P21359 2839 aa7.82□□□□□ -1.16
PDZRN3-204ENST00000466348 A0A087WWL8 130 aa7.82□□□□□ -1.16
PDZRN3-204ENST00000466348 HSBP1L1C9JCN9 74 aa7.82□□□□□ -1.16
PDZRN3-204ENST00000466348 DAZ2Q13117 558 aaKnown RBP7.82□□□□□ -1.16
PDZRN3-204ENST00000466348 ZNF56Q15929 161 aa7.82□□□□□ -1.16
PDZRN3-204ENST00000466348 IL17DQ8TAD2 202 aa7.82□□□□□ -1.16
PDZRN3-204ENST00000466348 TMEM158Q8WZ71 300 aa7.82□□□□□ -1.16
PDZRN3-204ENST00000466348 C16orf74Q96GX8 76 aa7.82□□□□□ -1.16
PDZRN3-204ENST00000466348 RS1O15537 224 aa7.81□□□□□ -1.16
PDZRN3-204ENST00000466348 SPRY2O43597 315 aa7.81□□□□□ -1.16
PDZRN3-204ENST00000466348 NUDT3O95989 172 aa7.81□□□□□ -1.16
PDZRN3-204ENST00000466348 FAM74A4Q5TZK3 123 aa7.81□□□□□ -1.16
PDZRN3-204ENST00000466348 UFSP1Q6NVU6 142 aa7.81□□□□□ -1.16
PDZRN3-204ENST00000466348 ZNF705AQ6ZN79 300 aaPredicted RBP7.81□□□□□ -1.16
PDZRN3-204ENST00000466348 LINC00173Q6ZV60 143 aa7.81□□□□□ -1.16
PDZRN3-204ENST00000466348 RNASE8Q8TDE3 154 aaKnown RBP7.81□□□□□ -1.16
PDZRN3-204ENST00000466348 TOMM6Q96B49 74 aa7.81□□□□□ -1.16
PDZRN3-204ENST00000466348 RPL39LQ96EH5 51 aaKnown RBP7.81□□□□□ -1.16
PDZRN3-204ENST00000466348 DNAJC30Q96LL9 226 aa7.81□□□□□ -1.16
PDZRN3-204ENST00000466348 MIEN1Q9BRT3 115 aa7.81□□□□□ -1.16
PDZRN3-204ENST00000466348 CSTL1Q9H114 145 aa7.81□□□□□ -1.16
PDZRN3-204ENST00000466348 JPT2Q9H910 190 aa7.81□□□□□ -1.16
PDZRN3-204ENST00000466348 ZMAT5Q9UDW3 170 aaKnown RBP7.81□□□□□ -1.16
PDZRN3-204ENST00000466348 SMIM9A6NGZ8 99 aa7.8□□□□□ -1.16
PDZRN3-204ENST00000466348 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.8□□□□□ -1.16
PDZRN3-204ENST00000466348 GIG44P09565 113 aaPredicted RBP7.8□□□□□ -1.16
PDZRN3-204ENST00000466348 RHOHQ15669 191 aa7.8□□□□□ -1.16
PDZRN3-204ENST00000466348 CFAP126Q5VTH2 177 aa7.8□□□□□ -1.16
PDZRN3-204ENST00000466348 MRPL52Q86TS9 123 aaKnown RBP7.8□□□□□ -1.16
PDZRN3-204ENST00000466348 CSNK1G2-AS1Q8NCQ2 148 aa7.8□□□□□ -1.16
PDZRN3-204ENST00000466348 KIR2DL5BQ8NHK3 375 aa7.8□□□□□ -1.16
PDZRN3-204ENST00000466348 PRO1933Q9H354 126 aa7.8□□□□□ -1.16
PDZRN3-204ENST00000466348 SETXQ7Z333 2677 aaKnown RBP7.79□□□□□ -1.16
PDZRN3-204ENST00000466348 SDHAF1A6NFY7 115 aa7.79□□□□□ -1.16
PDZRN3-204ENST00000466348 IGHV3-53P01767 116 aa7.79□□□□□ -1.16
PDZRN3-204ENST00000466348 DEFA6Q01524 100 aa7.79□□□□□ -1.16
PDZRN3-204ENST00000466348 RRN3P1Q2M238 152 aa7.79□□□□□ -1.16
PDZRN3-204ENST00000466348 SPATA45Q537H7 98 aa7.79□□□□□ -1.16
PDZRN3-204ENST00000466348 SHISA2Q6UWI4 295 aa7.79□□□□□ -1.16
PDZRN3-204ENST00000466348 OVOL2Q9BRP0 275 aa7.79□□□□□ -1.16
PDZRN3-204ENST00000466348 UQCR10Q9UDW1 63 aa7.79□□□□□ -1.16
PDZRN3-204ENST00000466348 PAM16Q9Y3D7 125 aa7.79□□□□□ -1.16
PDZRN3-204ENST00000466348 F8P00451 2351 aa7.78□□□□□ -1.16
PDZRN3-204ENST00000466348 TRAV12-1A0A0B4J245 112 aa7.78□□□□□ -1.16
PDZRN3-204ENST00000466348 LINC00587B1AMM8 73 aa7.78□□□□□ -1.16
PDZRN3-204ENST00000466348 I3L3M4 83 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms