RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 A0A1W2PRE2 83 aa13.51□□□□□ -0.25
COL6A1-203ENST00000466285 PEX7O00628 323 aa13.51□□□□□ -0.25
COL6A1-203ENST00000466285 S100A4P26447 101 aaKnown RBP13.51□□□□□ -0.25
COL6A1-203ENST00000466285 SAPCD1Q5SSQ6 148 aa13.51□□□□□ -0.25
COL6A1-203ENST00000466285 IL36BQ9NZH7 164 aa13.51□□□□□ -0.25
COL6A1-203ENST00000466285 B4DEV8 164 aa13.5□□□□□ -0.25
COL6A1-203ENST00000466285 KRBOX1C9JBD0 128 aa13.5□□□□□ -0.25
COL6A1-203ENST00000466285 J3QL48 77 aa13.5□□□□□ -0.25
COL6A1-203ENST00000466285 BCL2L11O43521 198 aa13.5□□□□□ -0.25
COL6A1-203ENST00000466285 SH2D1AO60880 128 aa13.5□□□□□ -0.25
COL6A1-203ENST00000466285 SERF2P84101 59 aa13.5□□□□□ -0.25
COL6A1-203ENST00000466285 FAM74A4Q5TZK3 123 aa13.5□□□□□ -0.25
COL6A1-203ENST00000466285 NIT1Q86X76 327 aa13.5□□□□□ -0.25
COL6A1-203ENST00000466285 C9orf62Q8N4C0 152 aa13.5□□□□□ -0.25
COL6A1-203ENST00000466285 TMSB15BA0A087X1C1 80 aa13.49□□□□□ -0.25
COL6A1-203ENST00000466285 ARMS2P0C7Q2 107 aa13.49□□□□□ -0.25
COL6A1-203ENST00000466285 TMUB2Q71RG4 321 aa13.49□□□□□ -0.25
COL6A1-203ENST00000466285 TRAV8-3A0A0A6YYJ7 113 aa13.48□□□□□ -0.25
COL6A1-203ENST00000466285 FAM74A7A6NL05 159 aa13.48□□□□□ -0.25
COL6A1-203ENST00000466285 IFNA7P01567 189 aa13.48□□□□□ -0.25
COL6A1-203ENST00000466285 MBP02144 154 aa13.48□□□□□ -0.25
COL6A1-203ENST00000466285 KLK12Q9UKR0 248 aa13.48□□□□□ -0.25
COL6A1-203ENST00000466285 BORCS7-ASMTA0A0B4J1R7 106 aa13.47□□□□□ -0.25
COL6A1-203ENST00000466285 CTXND1A0A1B0GTU2 59 aa13.47□□□□□ -0.25
COL6A1-203ENST00000466285 FABP5P3A8MUU1 101 aa13.47□□□□□ -0.25
COL6A1-203ENST00000466285 PIK3CD-AS1Q5SR53 167 aa13.47□□□□□ -0.25
COL6A1-203ENST00000466285 STOML3Q8TAV4 291 aa13.47□□□□□ -0.25
COL6A1-203ENST00000466285 IGKV2D-24A0A075B6R9 120 aa13.46□□□□□ -0.25
COL6A1-203ENST00000466285 DNLZQ5SXM8 178 aa13.46□□□□□ -0.25
COL6A1-203ENST00000466285 BOLA1Q9Y3E2 137 aa13.46□□□□□ -0.25
COL6A1-203ENST00000466285 KRTAP29-1A8MX34 341 aaPredicted RBP13.45□□□□□ -0.26
COL6A1-203ENST00000466285 M0R381 172 aa13.45□□□□□ -0.26
COL6A1-203ENST00000466285 PLA2G1BP04054 148 aaKnown RBP13.45□□□□□ -0.26
COL6A1-203ENST00000466285 SFRP2Q96HF1 295 aa13.45□□□□□ -0.26
COL6A1-203ENST00000466285 KANTRA0A1W2PQU2 76 aa13.44□□□□□ -0.26
COL6A1-203ENST00000466285 UBE2WQ96B02 151 aa13.44□□□□□ -0.26
COL6A1-203ENST00000466285 A0A087WWC5 75 aa13.43□□□□□ -0.26
COL6A1-203ENST00000466285 RHODO00212 210 aa13.43□□□□□ -0.26
COL6A1-203ENST00000466285 COX8CQ7Z4L0 72 aa13.43□□□□□ -0.26
COL6A1-203ENST00000466285 RBFOX3A6NFN3 312 aa13.42□□□□□ -0.26
COL6A1-203ENST00000466285 TOR2AQ5JU69 321 aa13.42□□□□□ -0.26
COL6A1-203ENST00000466285 CIRBP-AS1Q8TBR5 109 aa13.42□□□□□ -0.26
COL6A1-203ENST00000466285 MAP1LC3B2A6NCE7 125 aa13.41□□□□□ -0.26
COL6A1-203ENST00000466285 PFDN1O60925 122 aa13.41□□□□□ -0.26
COL6A1-203ENST00000466285 FHITP49789 147 aa13.41□□□□□ -0.26
COL6A1-203ENST00000466285 NKX2-5P52952 324 aaPredicted RBP13.41□□□□□ -0.26
COL6A1-203ENST00000466285 UBE2D3P61077 147 aa13.41□□□□□ -0.26
COL6A1-203ENST00000466285 UBE2D2P62837 147 aa13.41□□□□□ -0.26
COL6A1-203ENST00000466285 RPL19P84098 196 aaKnown RBP13.41□□□□□ -0.26
COL6A1-203ENST00000466285 ZNF674Q2M3X9 581 aa13.41□□□□□ -0.26
COL6A1-203ENST00000466285 LINC01559Q495D7 138 aa13.41□□□□□ -0.26
COL6A1-203ENST00000466285 SYT8Q8NBV8 401 aa13.41□□□□□ -0.26
COL6A1-203ENST00000466285 ZNF471Q9BX82 626 aaPredicted RBP13.41□□□□□ -0.26
COL6A1-203ENST00000466285 MAP1LC3BQ9GZQ8 125 aa13.41□□□□□ -0.26
COL6A1-203ENST00000466285 UBR4Q5T4S7 5183 aa13.4□□□□□ -0.26
COL6A1-203ENST00000466285 SEC11BP0C7V7 166 aa13.4□□□□□ -0.26
COL6A1-203ENST00000466285 FAM162BQ5T6X4 162 aa13.4□□□□□ -0.26
COL6A1-203ENST00000466285 ATRAIDQ6UW56 229 aa13.4□□□□□ -0.26
COL6A1-203ENST00000466285 SLC51BQ86UW2 128 aa13.4□□□□□ -0.26
COL6A1-203ENST00000466285 HIST1H2BAQ96A08 127 aa13.4□□□□□ -0.26
COL6A1-203ENST00000466285 CHAC1Q9BUX1 264 aa13.4□□□□□ -0.26
COL6A1-203ENST00000466285 PHLDA3Q9Y5J5 127 aa13.4□□□□□ -0.26
COL6A1-203ENST00000466285 URGCP-MRPS24S4R325 110 aa13.4□□□□□ -0.26
COL6A1-203ENST00000466285 LTAP01374 205 aa13.39□□□□□ -0.27
COL6A1-203ENST00000466285 EIF5AP63241 154 aaKnown RBP13.39□□□□□ -0.27
COL6A1-203ENST00000466285 ENHOQ6UWT2 76 aa13.39□□□□□ -0.27
COL6A1-203ENST00000466285 TPT1P13693 172 aaKnown RBP13.38□□□□□ -0.27
COL6A1-203ENST00000466285 MPV17L2Q567V2 206 aa13.38□□□□□ -0.27
COL6A1-203ENST00000466285 OR10AG1Q8NH19 301 aa13.38□□□□□ -0.27
COL6A1-203ENST00000466285 DEFB104AQ8WTQ1 72 aa13.38□□□□□ -0.27
COL6A1-203ENST00000466285 FMC1Q96HJ9 113 aa13.38□□□□□ -0.27
COL6A1-203ENST00000466285 MUC21A0A0G2JKD1 596 aa13.37□□□□□ -0.27
COL6A1-203ENST00000466285 MUC21A0A140T8X8 626 aa13.37□□□□□ -0.27
COL6A1-203ENST00000466285 HNRNPA3P51991 378 aaKnown RBP13.37□□□□□ -0.27
COL6A1-203ENST00000466285 AKR1C8PQ5T2L2 129 aa13.37□□□□□ -0.27
COL6A1-203ENST00000466285 Q8N976 141 aa13.37□□□□□ -0.27
COL6A1-203ENST00000466285 NEXN-AS1Q8NBZ9 246 aa13.37□□□□□ -0.27
COL6A1-203ENST00000466285 RMI2Q96E14 147 aa13.37□□□□□ -0.27
COL6A1-203ENST00000466285 ZFP30Q9Y2G7 519 aa13.37□□□□□ -0.27
COL6A1-203ENST00000466285 A0A087WX48 190 aa13.36□□□□□ -0.27
COL6A1-203ENST00000466285 UBE2G1P62253 170 aa13.36□□□□□ -0.27
COL6A1-203ENST00000466285 ZFP82Q8N141 532 aa13.36□□□□□ -0.27
COL6A1-203ENST00000466285 COX11Q9Y6N1 276 aa13.36□□□□□ -0.27
COL6A1-203ENST00000466285 TRBV6-1A0A0K0K1D8 114 aa13.35□□□□□ -0.27
COL6A1-203ENST00000466285 C15orf54Q8N8G6 183 aa13.35□□□□□ -0.27
COL6A1-203ENST00000466285 TRBV7-3A0A075B6L6 115 aa13.34□□□□□ -0.27
COL6A1-203ENST00000466285 TRBV10-1A0A0K0K1A3 114 aa13.34□□□□□ -0.27
COL6A1-203ENST00000466285 A0A1B0GV50 99 aa13.34□□□□□ -0.27
COL6A1-203ENST00000466285 AKR1C3P42330 323 aa13.34□□□□□ -0.27
COL6A1-203ENST00000466285 RPL36AP83881 106 aaKnown RBP13.34□□□□□ -0.27
COL6A1-203ENST00000466285 CST9LP1Q5W188 147 aa13.34□□□□□ -0.27
COL6A1-203ENST00000466285 OR10G8Q8NGN5 311 aa13.34□□□□□ -0.27
COL6A1-203ENST00000466285 RPL36ALQ969Q0 106 aaKnown RBP13.34□□□□□ -0.27
COL6A1-203ENST00000466285 TRBV6-8A0A0A6YYG3 113 aa13.33□□□□□ -0.28
COL6A1-203ENST00000466285 SCO2A0A1W2PP80 73 aa13.33□□□□□ -0.28
COL6A1-203ENST00000466285 UMAD1C9J7I0 102 aa13.33□□□□□ -0.28
COL6A1-203ENST00000466285 PAGE4O60829 102 aa13.33□□□□□ -0.28
COL6A1-203ENST00000466285 IGLV2-8P01709 118 aa13.33□□□□□ -0.28
COL6A1-203ENST00000466285 ZNF56Q15929 161 aa13.33□□□□□ -0.28
COL6A1-203ENST00000466285 PRR27Q6MZM9 219 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms