RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 SAMD10Q9BYL1 202 aa6.38□□□□□ -1.39
USP39-212ENST00000465514 JPT2Q9H910 190 aa6.38□□□□□ -1.39
USP39-212ENST00000465514 TMEM167BQ9NRX6 74 aa6.38□□□□□ -1.39
USP39-212ENST00000465514 A0A087WWC5 75 aa6.37□□□□□ -1.39
USP39-212ENST00000465514 FABP5P3A8MUU1 101 aa6.37□□□□□ -1.39
USP39-212ENST00000465514 FGF8P55075 233 aaPredicted RBP6.37□□□□□ -1.39
USP39-212ENST00000465514 SERF2P84101 59 aa6.37□□□□□ -1.39
USP39-212ENST00000465514 PIK3CD-AS1Q5SR53 167 aa6.37□□□□□ -1.39
USP39-212ENST00000465514 UFSP1Q6NVU6 142 aa6.37□□□□□ -1.39
USP39-212ENST00000465514 DAZAP1Q96EP5 407 aaKnown RBP6.37□□□□□ -1.39
USP39-212ENST00000465514 CHAC1Q9BUX1 264 aa6.37□□□□□ -1.39
USP39-212ENST00000465514 ACTR3CQ9C0K3 210 aaPredicted RBP6.37□□□□□ -1.39
USP39-212ENST00000465514 A0A1W2PRE2 83 aa6.36□□□□□ -1.39
USP39-212ENST00000465514 B4DEV8 164 aa6.36□□□□□ -1.39
USP39-212ENST00000465514 IGLV2-8P01709 118 aa6.36□□□□□ -1.39
USP39-212ENST00000465514 RPL37AP61513 92 aaKnown RBP6.36□□□□□ -1.39
USP39-212ENST00000465514 CIRBP-AS1Q8TBR5 109 aa6.36□□□□□ -1.39
USP39-212ENST00000465514 DNAJC30Q96LL9 226 aa6.36□□□□□ -1.39
USP39-212ENST00000465514 AQP10Q96PS8 301 aa6.36□□□□□ -1.39
USP39-212ENST00000465514 IL36BQ9NZH7 164 aa6.36□□□□□ -1.39
USP39-212ENST00000465514 TNFSF18Q9UNG2 199 aa6.36□□□□□ -1.39
USP39-212ENST00000465514 ALG5Q9Y673 324 aa6.36□□□□□ -1.39
USP39-212ENST00000465514 COX11Q9Y6N1 276 aa6.36□□□□□ -1.39
USP39-212ENST00000465514 ARL2-SNX15V9GYD0 113 aa6.36□□□□□ -1.39
USP39-212ENST00000465514 IGKV2D-24A0A075B6R9 120 aa6.35□□□□□ -1.39
USP39-212ENST00000465514 RNF222A6NCQ9 220 aa6.35□□□□□ -1.39
USP39-212ENST00000465514 RBFOX3A6NFN3 312 aa6.35□□□□□ -1.39
USP39-212ENST00000465514 H3BVH4 76 aa6.35□□□□□ -1.39
USP39-212ENST00000465514 IFNA7P01567 189 aa6.35□□□□□ -1.39
USP39-212ENST00000465514 UBE2G2P60604 165 aa6.35□□□□□ -1.39
USP39-212ENST00000465514 NIT1Q86X76 327 aa6.35□□□□□ -1.39
USP39-212ENST00000465514 Q8N976 141 aa6.35□□□□□ -1.39
USP39-212ENST00000465514 RMI2Q96E14 147 aa6.35□□□□□ -1.39
USP39-212ENST00000465514 KLK12Q9UKR0 248 aa6.35□□□□□ -1.39
USP39-212ENST00000465514 URGCP-MRPS24S4R325 110 aa6.35□□□□□ -1.39
USP39-212ENST00000465514 GRIFINA4D1Z8 144 aa6.34□□□□□ -1.39
USP39-212ENST00000465514 KRBOX1C9JBD0 128 aa6.34□□□□□ -1.39
USP39-212ENST00000465514 M0R036 132 aa6.34□□□□□ -1.39
USP39-212ENST00000465514 RHODO00212 210 aa6.34□□□□□ -1.39
USP39-212ENST00000465514 PEX7O00628 323 aa6.34□□□□□ -1.39
USP39-212ENST00000465514 ARMS2P0C7Q2 107 aa6.34□□□□□ -1.39
USP39-212ENST00000465514 CRIP1P50238 77 aa6.34□□□□□ -1.39
USP39-212ENST00000465514 ZNF726P1Q15940 193 aa6.34□□□□□ -1.39
USP39-212ENST00000465514 DNLZQ5SXM8 178 aa6.34□□□□□ -1.39
USP39-212ENST00000465514 FAM74A4Q5TZK3 123 aa6.34□□□□□ -1.39
USP39-212ENST00000465514 Q86TA4 180 aa6.34□□□□□ -1.39
USP39-212ENST00000465514 OR11H4Q8NGC9 324 aa6.34□□□□□ -1.39
USP39-212ENST00000465514 ZC2HC1AQ96GY0 325 aa6.34□□□□□ -1.39
USP39-212ENST00000465514 A0A087WWL8 130 aa6.33□□□□□ -1.4
USP39-212ENST00000465514 SH2D1AO60880 128 aa6.33□□□□□ -1.4
USP39-212ENST00000465514 SEC11BP0C7V7 166 aa6.33□□□□□ -1.4
USP39-212ENST00000465514 ODF1Q14990 250 aa6.33□□□□□ -1.4
USP39-212ENST00000465514 Q5BKY6 102 aa6.33□□□□□ -1.4
USP39-212ENST00000465514 RPL7L1Q6DKI1 246 aaKnown RBP6.33□□□□□ -1.4
USP39-212ENST00000465514 UBE2WQ96B02 151 aa6.33□□□□□ -1.4
USP39-212ENST00000465514 SFRP2Q96HF1 295 aa6.33□□□□□ -1.4
USP39-212ENST00000465514 MED28Q9H204 178 aa6.33□□□□□ -1.4
USP39-212ENST00000465514 MUC2Q02817 5179 aa6.32□□□□□ -1.4
USP39-212ENST00000465514 A0A087WX48 190 aa6.32□□□□□ -1.4
USP39-212ENST00000465514 CTXND1A0A1B0GTU2 59 aa6.32□□□□□ -1.4
USP39-212ENST00000465514 FAM74A7A6NL05 159 aa6.32□□□□□ -1.4
USP39-212ENST00000465514 M0R381 172 aa6.32□□□□□ -1.4
USP39-212ENST00000465514 ELOBQ15370 118 aa6.32□□□□□ -1.4
USP39-212ENST00000465514 FAM162BQ5T6X4 162 aa6.32□□□□□ -1.4
USP39-212ENST00000465514 COX8CQ7Z4L0 72 aa6.32□□□□□ -1.4
USP39-212ENST00000465514 HIST1H2BAQ96A08 127 aa6.32□□□□□ -1.4
USP39-212ENST00000465514 NKX6-2Q9C056 277 aaPredicted RBP6.32□□□□□ -1.4
USP39-212ENST00000465514 ZFP30Q9Y2G7 519 aa6.32□□□□□ -1.4
USP39-212ENST00000465514 PHLDA3Q9Y5J5 127 aa6.32□□□□□ -1.4
USP39-212ENST00000465514 TMSB15BA0A087X1C1 80 aa6.31□□□□□ -1.4
USP39-212ENST00000465514 BORCS7-ASMTA0A0B4J1R7 106 aa6.31□□□□□ -1.4
USP39-212ENST00000465514 TPT1P13693 172 aaKnown RBP6.31□□□□□ -1.4
USP39-212ENST00000465514 UBE2D3P61077 147 aa6.31□□□□□ -1.4
USP39-212ENST00000465514 UBE2D2P62837 147 aa6.31□□□□□ -1.4
USP39-212ENST00000465514 KCNIP4Q6PIL6 250 aa6.31□□□□□ -1.4
USP39-212ENST00000465514 ATRAIDQ6UW56 229 aa6.31□□□□□ -1.4
USP39-212ENST00000465514 INO80EQ8NBZ0 244 aaPredicted RBP6.31□□□□□ -1.4
USP39-212ENST00000465514 CHCHD7Q9BUK0 85 aa6.31□□□□□ -1.4
USP39-212ENST00000465514 MRPL18Q9H0U6 180 aaKnown RBP6.31□□□□□ -1.4
USP39-212ENST00000465514 TRBV7-3A0A075B6L6 115 aa6.3□□□□□ -1.4
USP39-212ENST00000465514 TRBV10-1A0A0K0K1A3 114 aa6.3□□□□□ -1.4
USP39-212ENST00000465514 UBE2G1P62253 170 aa6.3□□□□□ -1.4
USP39-212ENST00000465514 RPL36AP83881 106 aaKnown RBP6.3□□□□□ -1.4
USP39-212ENST00000465514 Q0VG73 95 aa6.3□□□□□ -1.4
USP39-212ENST00000465514 ZNF674Q2M3X9 581 aa6.3□□□□□ -1.4
USP39-212ENST00000465514 ZFP82Q8N141 532 aa6.3□□□□□ -1.4
USP39-212ENST00000465514 RPL36ALQ969Q0 106 aaKnown RBP6.3□□□□□ -1.4
USP39-212ENST00000465514 FMC1Q96HJ9 113 aa6.3□□□□□ -1.4
USP39-212ENST00000465514 LPAP08519 4548 aa6.3□□□□□ -1.4
USP39-212ENST00000465514 FXYD6-FXYD2A0A087WZ82 144 aa6.29□□□□□ -1.4
USP39-212ENST00000465514 TMEM262E9PQX1 116 aa6.29□□□□□ -1.4
USP39-212ENST00000465514 GIPP09681 153 aaPredicted RBP6.29□□□□□ -1.4
USP39-212ENST00000465514 C14orf177Q52M58 125 aa6.29□□□□□ -1.4
USP39-212ENST00000465514 AKR1C8PQ5T2L2 129 aa6.29□□□□□ -1.4
USP39-212ENST00000465514 ENHOQ6UWT2 76 aa6.29□□□□□ -1.4
USP39-212ENST00000465514 Q6ZRU5 148 aa6.29□□□□□ -1.4
USP39-212ENST00000465514 TRBV6-8A0A0A6YYG3 113 aa6.28□□□□□ -1.4
USP39-212ENST00000465514 TRBV6-1A0A0K0K1D8 114 aa6.28□□□□□ -1.4
USP39-212ENST00000465514 MAP1LC3B2A6NCE7 125 aa6.28□□□□□ -1.4
USP39-212ENST00000465514 GHRHP01286 108 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms