RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 PEX7O00628 323 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 GNRH2O43555 120 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 IGKV1D-12P01611 117 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 PEBP1P30086 187 aaKnown RBP2.27□□□□□ -2.05
SNX4-202ENST00000465505 CKS2P33552 79 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 FUSP35637 526 aaKnown RBP eCLIP2.27□□□□□ -2.05
SNX4-202ENST00000465505 ZNF791Q3KP31 576 aaPredicted RBP2.27□□□□□ -2.05
SNX4-202ENST00000465505 NCBP2-AS2Q69YL0 99 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 C6orf201Q7Z4U5 140 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 VMO1Q7Z5L0 202 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 NDUFA11Q86Y39 141 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 PDPNQ86YL7 162 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 FAM216BQ8N7L0 139 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 CSNK1G2-AS1Q8NCQ2 148 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 IFI27L1Q96BM0 104 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 CHCHD1Q96BP2 118 aaKnown RBP2.27□□□□□ -2.05
SNX4-202ENST00000465505 RMI2Q96E14 147 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 B9D2Q9BPU9 175 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 SLC50A1Q9BRV3 221 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 CCL28Q9NRJ3 127 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 LINC00474Q9P2X8 69 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 TAC3Q9UHF0 121 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 HILPDAQ9Y5L2 63 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 SDK2Q58EX2 2172 aa2.27□□□□□ -2.05
SNX4-202ENST00000465505 GOLGA4Q13439 2230 aaKnown RBP2.26□□□□□ -2.05
SNX4-202ENST00000465505 INTS1Q8N201 2190 aaKnown RBP2.26□□□□□ -2.05
SNX4-202ENST00000465505 ARHGAP32A7KAX9 2087 aa2.26□□□□□ -2.05
SNX4-202ENST00000465505 TRBV7-3A0A075B6L6 115 aa2.26□□□□□ -2.05
SNX4-202ENST00000465505 TRAV1-2A0A0B4J238 106 aa2.26□□□□□ -2.05
SNX4-202ENST00000465505 IGKV6-21A0A0C4DH24 114 aa2.26□□□□□ -2.05
SNX4-202ENST00000465505 MYMXA0A1B0GTQ4 84 aa2.26□□□□□ -2.05
SNX4-202ENST00000465505 J3QLW9 94 aa2.26□□□□□ -2.05
SNX4-202ENST00000465505 IGHV3-48P01763 117 aa2.26□□□□□ -2.05
SNX4-202ENST00000465505 IGHV4-34P06331 123 aa2.26□□□□□ -2.05
SNX4-202ENST00000465505 PIRTP0C851 137 aa2.26□□□□□ -2.05
SNX4-202ENST00000465505 RNASE2P10153 161 aaKnown RBP2.26□□□□□ -2.05
SNX4-202ENST00000465505 XCL1P47992 114 aa2.26□□□□□ -2.05
SNX4-202ENST00000465505 SMIM11AP58511 58 aa2.26□□□□□ -2.05
SNX4-202ENST00000465505 ZNF816Q0VGE8 651 aaPredicted RBP2.26□□□□□ -2.05
SNX4-202ENST00000465505 CIRBPQ14011 172 aaKnown RBP2.26□□□□□ -2.05
SNX4-202ENST00000465505 ESRGQ1W209 222 aa2.26□□□□□ -2.05
SNX4-202ENST00000465505 CASC10Q5T4H9 136 aa2.26□□□□□ -2.05
SNX4-202ENST00000465505 KRTAP5-5Q701N2 237 aaPredicted RBP2.26□□□□□ -2.05
SNX4-202ENST00000465505 Q8N7P7 452 aa2.26□□□□□ -2.05
SNX4-202ENST00000465505 NABP2Q9BQ15 211 aa2.26□□□□□ -2.05
SNX4-202ENST00000465505 SLC25A2Q9BXI2 301 aa2.26□□□□□ -2.05
SNX4-202ENST00000465505 LINC00597Q9H2U6 94 aa2.26□□□□□ -2.05
SNX4-202ENST00000465505 SND1-IT1Q9HBX3 110 aa2.26□□□□□ -2.05
SNX4-202ENST00000465505 DYNLRB1Q9NP97 96 aa2.26□□□□□ -2.05
SNX4-202ENST00000465505 ARL2-SNX15V9GYD0 113 aa2.26□□□□□ -2.05
SNX4-202ENST00000465505 PRRC2BQ5JSZ5 2229 aaKnown RBP2.26□□□□□ -2.05
SNX4-202ENST00000465505 BCORQ6W2J9 1755 aa2.26□□□□□ -2.05
SNX4-202ENST00000465505 TIAM2Q8IVF5 1701 aa2.25□□□□□ -2.05
SNX4-202ENST00000465505 IGLV3-12A0A075B6K2 115 aa2.25□□□□□ -2.05
SNX4-202ENST00000465505 IGHV3-16A0A0C4DH30 117 aa2.25□□□□□ -2.05
SNX4-202ENST00000465505 SLC25A20O43772 301 aa2.25□□□□□ -2.05
SNX4-202ENST00000465505 IGHV3-13P01766 116 aa2.25□□□□□ -2.05
SNX4-202ENST00000465505 BGLAPP02818 100 aa2.25□□□□□ -2.05
SNX4-202ENST00000465505 ZNF32P17041 273 aa2.25□□□□□ -2.05
SNX4-202ENST00000465505 RPL27AP46776 148 aaKnown RBP2.25□□□□□ -2.05
SNX4-202ENST00000465505 UBE2D1P51668 147 aa2.25□□□□□ -2.05
SNX4-202ENST00000465505 PRR4Q16378 134 aa2.25□□□□□ -2.05
SNX4-202ENST00000465505 MRPL51Q4U2R6 128 aaKnown RBP2.25□□□□□ -2.05
SNX4-202ENST00000465505 MIR17HGQ75NE6 70 aa2.25□□□□□ -2.05
SNX4-202ENST00000465505 NUP37Q8NFH4 326 aa2.25□□□□□ -2.05
SNX4-202ENST00000465505 OSTCQ9NRP0 149 aa2.25□□□□□ -2.05
SNX4-202ENST00000465505 MUC22E2RYF6 1773 aaPredicted RBP2.25□□□□□ -2.05
SNX4-202ENST00000465505 PI4KAP42356 2102 aa2.24□□□□□ -2.05
SNX4-202ENST00000465505 LTBP4Q8N2S1 1624 aa2.24□□□□□ -2.05
SNX4-202ENST00000465505 TET1Q8NFU7 2136 aa2.24□□□□□ -2.05
SNX4-202ENST00000465505 TRBV7-1A0A0A6YYK4 115 aa2.24□□□□□ -2.05
SNX4-202ENST00000465505 H3BMM0 161 aa2.24□□□□□ -2.05
SNX4-202ENST00000465505 LEPROTO15243 131 aa2.24□□□□□ -2.05
SNX4-202ENST00000465505 IL4P05112 153 aa2.24□□□□□ -2.05
SNX4-202ENST00000465505 CHTF8P0CG12 524 aa2.24□□□□□ -2.05
SNX4-202ENST00000465505 EGFEM1PQ0D2K5 195 aa2.24□□□□□ -2.05
SNX4-202ENST00000465505 KISS1Q15726 138 aa2.24□□□□□ -2.05
SNX4-202ENST00000465505 ZNF56Q15929 161 aa2.24□□□□□ -2.05
SNX4-202ENST00000465505 SPANXN1Q5VSR9 72 aa2.24□□□□□ -2.05
SNX4-202ENST00000465505 ZCCHC23Q6ZST2 131 aa2.24□□□□□ -2.05
SNX4-202ENST00000465505 CLEC2BQ92478 149 aa2.24□□□□□ -2.05
SNX4-202ENST00000465505 UBE2WQ96B02 151 aa2.24□□□□□ -2.05
SNX4-202ENST00000465505 Q96M85 177 aa2.24□□□□□ -2.05
SNX4-202ENST00000465505 SMIM7Q9BQ49 75 aa2.24□□□□□ -2.05
SNX4-202ENST00000465505 FAM103A1Q9BTL3 118 aaKnown RBP2.24□□□□□ -2.05
SNX4-202ENST00000465505 TIMM21Q9BVV7 248 aa2.24□□□□□ -2.05
SNX4-202ENST00000465505 CYP4F30PQ9H0H9 118 aa2.24□□□□□ -2.05
SNX4-202ENST00000465505 NRXN2Q9P2S2 1712 aa2.24□□□□□ -2.05
SNX4-202ENST00000465505 DEPDC5O75140 1603 aa2.24□□□□□ -2.05
SNX4-202ENST00000465505 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.23□□□□□ -2.05
SNX4-202ENST00000465505 ZGRF1Q86YA3 2104 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 A0A0B4J2C4 111 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 PIGBOS1A0A0B4J2F0 54 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 IGKV1-6A0A0C4DH72 117 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 TRBV10-2A0A0K0K1G8 114 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 A0A1B0GWA3 101 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 CRYM-AS1A6NIL9 109 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 SRRM5B3KS81 715 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 PPYP01298 95 aa2.23□□□□□ -2.05
SNX4-202ENST00000465505 IGKV1-39P01597 117 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms