RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 VSTM2AQ8TAG5 236 aa0.28□□□□□ -2.36
TM9SF3-203ENST00000464654 LZICQ8WZA0 190 aa0.28□□□□□ -2.36
TM9SF3-203ENST00000464654 COPZ2Q9P299 210 aa0.28□□□□□ -2.36
TM9SF3-203ENST00000464654 TPRP12270 2363 aaKnown RBP0.28□□□□□ -2.36
TM9SF3-203ENST00000464654 TTC28Q96AY4 2481 aa0.27□□□□□ -2.37
TM9SF3-203ENST00000464654 M0R2Z0 102 aa0.27□□□□□ -2.37
TM9SF3-203ENST00000464654 NPFFO15130 113 aa0.27□□□□□ -2.37
TM9SF3-203ENST00000464654 APOC1P02654 83 aa0.27□□□□□ -2.37
TM9SF3-203ENST00000464654 SMCO1Q147U7 214 aa0.27□□□□□ -2.37
TM9SF3-203ENST00000464654 IFI27L1Q96BM0 104 aa0.27□□□□□ -2.37
TM9SF3-203ENST00000464654 BET1LQ9NYM9 111 aa0.27□□□□□ -2.37
TM9SF3-203ENST00000464654 NDUFA12Q9UI09 145 aa0.27□□□□□ -2.37
TM9SF3-203ENST00000464654 CADP27708 2225 aa0.27□□□□□ -2.37
TM9SF3-203ENST00000464654 TMEM2Q9UHN6 1383 aa0.27□□□□□ -2.37
TM9SF3-203ENST00000464654 TNCP24821 2201 aa0.26□□□□□ -2.37
TM9SF3-203ENST00000464654 F8P00451 2351 aa0.26□□□□□ -2.37
TM9SF3-203ENST00000464654 KMT2AQ03164 3969 aa0.26□□□□□ -2.37
TM9SF3-203ENST00000464654 ZFYVE26Q68DK2 2539 aa0.26□□□□□ -2.37
TM9SF3-203ENST00000464654 CSMD3Q7Z407 3707 aa0.26□□□□□ -2.37
TM9SF3-203ENST00000464654 MCRIP1C9JLW8 97 aa0.26□□□□□ -2.37
TM9SF3-203ENST00000464654 ZNF670-ZNF695F2Z2N8 137 aa0.26□□□□□ -2.37
TM9SF3-203ENST00000464654 CCL3L1P16619 93 aa0.26□□□□□ -2.37
TM9SF3-203ENST00000464654 NPC2P61916 151 aa0.26□□□□□ -2.37
TM9SF3-203ENST00000464654 RPS25P62851 125 aaKnown RBP0.26□□□□□ -2.37
TM9SF3-203ENST00000464654 MIC13Q5XKP0 118 aa0.26□□□□□ -2.37
TM9SF3-203ENST00000464654 TSKUQ8WUA8 353 aa0.26□□□□□ -2.37
TM9SF3-203ENST00000464654 TMEM141Q96I45 108 aa0.26□□□□□ -2.37
TM9SF3-203ENST00000464654 SDF2Q99470 211 aa0.26□□□□□ -2.37
TM9SF3-203ENST00000464654 TPT1P8Q9HAU6 139 aa0.26□□□□□ -2.37
TM9SF3-203ENST00000464654 COA4Q9NYJ1 87 aa0.26□□□□□ -2.37
TM9SF3-203ENST00000464654 PAIP2BQ9ULR5 123 aaKnown RBP0.26□□□□□ -2.37
TM9SF3-203ENST00000464654 BICRAQ9NZM4 1560 aa0.26□□□□□ -2.37
TM9SF3-203ENST00000464654 MUC22E2RYF6 1773 aaPredicted RBP0.26□□□□□ -2.37
TM9SF3-203ENST00000464654 RBBP6Q7Z6E9 1792 aaKnown RBP0.26□□□□□ -2.37
TM9SF3-203ENST00000464654 HUWE1Q7Z6Z7 4374 aaKnown RBP0.26□□□□□ -2.37
TM9SF3-203ENST00000464654 PHIPQ8WWQ0 1821 aa0.25□□□□□ -2.37
TM9SF3-203ENST00000464654 MYOM3Q5VTT5 1437 aa0.25□□□□□ -2.37
TM9SF3-203ENST00000464654 J3QR89 54 aa0.25□□□□□ -2.37
TM9SF3-203ENST00000464654 S100A12P80511 92 aa0.25□□□□□ -2.37
TM9SF3-203ENST00000464654 SPCS2Q15005 226 aa0.25□□□□□ -2.37
TM9SF3-203ENST00000464654 SCIMPQ6UWF3 145 aa0.25□□□□□ -2.37
TM9SF3-203ENST00000464654 Q6ZUT4 128 aa0.25□□□□□ -2.37
TM9SF3-203ENST00000464654 PPP1R1CQ8WVI7 109 aa0.25□□□□□ -2.37
TM9SF3-203ENST00000464654 DSCR8Q96T75 97 aa0.25□□□□□ -2.37
TM9SF3-203ENST00000464654 CHD9Q3L8U1 2897 aa0.25□□□□□ -2.37
TM9SF3-203ENST00000464654 ZFHX3Q15911 3703 aa0.25□□□□□ -2.37
TM9SF3-203ENST00000464654 MACF1Q9UPN3 7388 aaKnown RBP0.25□□□□□ -2.37
TM9SF3-203ENST00000464654 CDK13Q14004 1512 aaKnown RBP0.24□□□□□ -2.37
TM9SF3-203ENST00000464654 TRAV12-3A0A0B4J271 114 aa0.24□□□□□ -2.37
TM9SF3-203ENST00000464654 TCRBV3S1A0A5B6 114 aa0.24□□□□□ -2.37
TM9SF3-203ENST00000464654 M0R129 80 aa0.24□□□□□ -2.37
TM9SF3-203ENST00000464654 COX4I1P13073 169 aa0.24□□□□□ -2.37
TM9SF3-203ENST00000464654 SSBP1Q04837 148 aaKnown RBP0.24□□□□□ -2.37
TM9SF3-203ENST00000464654 SPANXN1Q5VSR9 72 aa0.24□□□□□ -2.37
TM9SF3-203ENST00000464654 SLC48A1Q6P1K1 146 aa0.24□□□□□ -2.37
TM9SF3-203ENST00000464654 TSTD1Q8NFU3 115 aa0.24□□□□□ -2.37
TM9SF3-203ENST00000464654 MAST4O15021 2626 aa0.24□□□□□ -2.37
TM9SF3-203ENST00000464654 TNS1Q9HBL0 1735 aaKnown RBP0.24□□□□□ -2.37
TM9SF3-203ENST00000464654 NRXN2Q9P2S2 1712 aa0.24□□□□□ -2.37
TM9SF3-203ENST00000464654 OTOGQ6ZRI0 2925 aa0.24□□□□□ -2.37
TM9SF3-203ENST00000464654 CELSR2Q9HCU4 2923 aa0.24□□□□□ -2.37
TM9SF3-203ENST00000464654 DOCK11Q5JSL3 2073 aa0.23□□□□□ -2.37
TM9SF3-203ENST00000464654 GRIN2AQ12879 1464 aa0.23□□□□□ -2.37
TM9SF3-203ENST00000464654 RBAKDNA6NC62 111 aa0.23□□□□□ -2.37
TM9SF3-203ENST00000464654 K7ERU9 68 aa0.23□□□□□ -2.37
TM9SF3-203ENST00000464654 NDUFA2O43678 99 aa0.23□□□□□ -2.37
TM9SF3-203ENST00000464654 PIRTP0C851 137 aa0.23□□□□□ -2.37
TM9SF3-203ENST00000464654 COPZ1P61923 177 aa0.23□□□□□ -2.37
TM9SF3-203ENST00000464654 C9orf116Q5BN46 136 aaPredicted RBP0.23□□□□□ -2.37
TM9SF3-203ENST00000464654 CYP2G1PQ6ZSU1 146 aa0.23□□□□□ -2.37
TM9SF3-203ENST00000464654 TCEAL4Q96EI5 215 aa0.23□□□□□ -2.37
TM9SF3-203ENST00000464654 Q96NJ1 140 aa0.23□□□□□ -2.37
TM9SF3-203ENST00000464654 PFDN5Q99471 154 aa0.23□□□□□ -2.37
TM9SF3-203ENST00000464654 TMEM191AQ9H0A3 160 aa0.23□□□□□ -2.37
TM9SF3-203ENST00000464654 KDM6BO15054 1643 aa0.23□□□□□ -2.37
TM9SF3-203ENST00000464654 PTPRZ1P23471 2315 aaPredicted RBP0.22□□□□□ -2.37
TM9SF3-203ENST00000464654 SOGA1O94964 1423 aa0.22□□□□□ -2.37
TM9SF3-203ENST00000464654 DAPK1P53355 1430 aa0.22□□□□□ -2.37
TM9SF3-203ENST00000464654 GVQW2A0A096LPI5 108 aaPredicted RBP0.22□□□□□ -2.37
TM9SF3-203ENST00000464654 GUCA1AP43080 201 aaPredicted RBP0.22□□□□□ -2.37
TM9SF3-203ENST00000464654 RRAS2P62070 204 aaPredicted RBP0.22□□□□□ -2.37
TM9SF3-203ENST00000464654 COX7B2Q8TF08 81 aa0.22□□□□□ -2.37
TM9SF3-203ENST00000464654 DPH3Q96FX2 82 aa0.22□□□□□ -2.37
TM9SF3-203ENST00000464654 SSC5DA1L4H1 1573 aa0.22□□□□□ -2.37
TM9SF3-203ENST00000464654 IGSF10Q6WRI0 2623 aa0.22□□□□□ -2.37
TM9SF3-203ENST00000464654 ASXL3Q9C0F0 2248 aa0.22□□□□□ -2.37
TM9SF3-203ENST00000464654 PARP14Q460N5 1801 aa0.22□□□□□ -2.37
TM9SF3-203ENST00000464654 IGF2RP11717 2491 aa0.21□□□□□ -2.38
TM9SF3-203ENST00000464654 CLPSL1A2RUU4 121 aa0.21□□□□□ -2.38
TM9SF3-203ENST00000464654 HMGN1P05114 100 aa0.21□□□□□ -2.38
TM9SF3-203ENST00000464654 ARPC4P59998 168 aa0.21□□□□□ -2.38
TM9SF3-203ENST00000464654 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.21□□□□□ -2.38
TM9SF3-203ENST00000464654 C20orf197Q8N268 126 aa0.21□□□□□ -2.38
TM9SF3-203ENST00000464654 BPESC1Q9GZL8 116 aa0.21□□□□□ -2.38
TM9SF3-203ENST00000464654 PROK2Q9HC23 129 aa0.21□□□□□ -2.38
TM9SF3-203ENST00000464654 SIPA1L3O60292 1781 aaPredicted RBP0.21□□□□□ -2.38
TM9SF3-203ENST00000464654 UBE2D1P51668 147 aa0.2□□□□□ -2.38
TM9SF3-203ENST00000464654 VMO1Q7Z5L0 202 aa0.2□□□□□ -2.38
TM9SF3-203ENST00000464654 C4orf33Q8N1A6 199 aa0.2□□□□□ -2.38
TM9SF3-203ENST00000464654 C10orf82Q8WW14 230 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms