RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 TRAV41A0A0B4J266 112 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 C2orf70A6NJV1 201 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 CEBPZOSA8MTT3 80 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 H3BQ85 93 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 ZNF73O43830 326 aaPredicted RBP1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 BCE1O60756 84 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 NPYP01303 97 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 IGHV3-53P01767 116 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 HBDP02042 147 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 P0C880 135 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 GCHFRP30047 84 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 CKS2P33552 79 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 MP68P56378 58 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 SNRPD3P62318 126 aaKnown RBP1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 SERF2P84101 59 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 MIC13Q5XKP0 118 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 LCA10Q71F78 164 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 C5orf38Q86SI9 138 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 RPRMLQ8N4K4 120 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 C3orf56Q8N813 242 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 MORN4Q8NDC4 146 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 ZNF563Q8TA94 476 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 C10orf105Q8TEF2 133 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 SPTSSAQ969W0 71 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 NHP2Q9NX24 153 aaKnown RBP1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 EPDR1Q9UM22 224 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 KLK5Q9Y337 293 aaPredicted RBP1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 HILPDAQ9Y5L2 63 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 LY96Q9Y6Y9 160 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 VWA8A3KMH1 1905 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 ALPK3Q96L96 1907 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 NINQ8N4C6 2090 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 SDK2Q58EX2 2172 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 ADGRB1O14514 1584 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 ERCC6L2Q5T890 1561 aa1.81□□□□□ -2.12
HMGXB4-205ENST00000464480 DDX60LQ5H9U9 1706 aaKnown RBP1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 BTAF1O14981 1849 aa1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 IGKV1OR2-108A0A075B7D4 117 aa1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 MYMXA0A1B0GTQ4 84 aa1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 A6NIN4 97 aa1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 H3BMM0 161 aa1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 M0R381 172 aa1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 COX7A2LO14548 114 aa1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 CCL16O15467 120 aa1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 HCRTO43612 131 aa1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 TIMM17BO60830 172 aa1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 CPSF4O95639 269 aaKnown RBP1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 TRGV3P03979 118 aa1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 ZNF117Q03924 483 aa1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 ZNF56Q15929 161 aa1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 EBLN2Q6P2I7 272 aa1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 Q6ZQT7 251 aa1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 MED12LQ86YW9 2145 aa1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 RPP25LQ8N5L8 163 aaKnown RBP1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 UBE2WQ96B02 151 aa1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 IFI27L1Q96BM0 104 aa1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 ZC2HC1AQ96GY0 325 aa1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 ZNF714Q96N38 554 aa1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 ODF3Q96PU9 254 aa1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 CCL13Q99616 98 aa1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 C16orf95Q9H693 158 aa1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 RREB1Q92766 1687 aa1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 COL5A3P25940 1745 aaPredicted RBP1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 NYNRINQ9P2P1 1898 aaKnown RBP1.8□□□□□ -2.12
HMGXB4-205ENST00000464480 DOCK6Q96HP0 2047 aa1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 IGHV3OR15-7A0A075B7D8 119 aa1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 A0A1B0GWA3 101 aa1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 TCRBV4S1A1TA0A5B7 111 aa1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 CRYM-AS1A6NIL9 109 aa1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 TMEM256-PLSCR3K7ERE1 68 aa1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 M0R378 163 aa1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 LST1O00453 97 aa1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 SLC25A20O43772 301 aa1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 S100A3P33764 101 aa1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 DSCR4P56555 118 aaPredicted RBP1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 HIST1H4AP62805 103 aaKnown RBP1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 RPL18Q07020 188 aaKnown RBP1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 SLC48A1Q6P1K1 146 aa1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 PHF5AQ7RTV0 110 aaKnown RBP1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 FAM19A2Q8N3H0 131 aa1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 TMEM75Q8N9X5 138 aa1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 DYNLRB2Q8TF09 96 aa1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 TAS2R4Q9NYW5 299 aa1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 HHLA3Q9XRX5 114 aa1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 DUOX1Q9NRD9 1551 aa1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 LMO7Q8WWI1 1683 aa1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 ADAMTS7Q9UKP4 1686 aa1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 WDR90Q96KV7 1748 aa1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 TOGARAM1Q9Y4F4 1720 aa1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 MAST2Q6P0Q8 1798 aa1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 HEATR5AQ86XA9 2040 aa1.79□□□□□ -2.12
HMGXB4-205ENST00000464480 EXPH5Q8NEV8 1989 aa1.78□□□□□ -2.12
HMGXB4-205ENST00000464480 MIA3Q5JRA6 1907 aa1.78□□□□□ -2.12
HMGXB4-205ENST00000464480 LOC285556D6RIA3 1793 aa1.78□□□□□ -2.12
HMGXB4-205ENST00000464480 NHSL1Q5SYE7 1610 aa1.78□□□□□ -2.12
HMGXB4-205ENST00000464480 TRAV3A0A0B4J244 114 aa1.78□□□□□ -2.12
HMGXB4-205ENST00000464480 LOC107984156A0A0G2JMH3 177 aa1.78□□□□□ -2.12
HMGXB4-205ENST00000464480 A8MUN3 132 aa1.78□□□□□ -2.12
HMGXB4-205ENST00000464480 C9JCJ5 164 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms