RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 AKR1C8PQ5T2L2 129 aa9.57□□□□□ -0.88
ALMS1-202ENST00000464408 COX8CQ7Z4L0 72 aa9.57□□□□□ -0.88
ALMS1-202ENST00000464408 BAALCQ8WXS3 180 aa9.57□□□□□ -0.88
ALMS1-202ENST00000464408 HIST1H2BAQ96A08 127 aa9.57□□□□□ -0.88
ALMS1-202ENST00000464408 MAP1LC3BQ9GZQ8 125 aa9.57□□□□□ -0.88
ALMS1-202ENST00000464408 BATF3Q9NR55 127 aa9.57□□□□□ -0.88
ALMS1-202ENST00000464408 BOLA1Q9Y3E2 137 aa9.57□□□□□ -0.88
ALMS1-202ENST00000464408 FHITP49789 147 aa9.56□□□□□ -0.88
ALMS1-202ENST00000464408 FAM162BQ5T6X4 162 aa9.56□□□□□ -0.88
ALMS1-202ENST00000464408 OR11H4Q8NGC9 324 aa9.56□□□□□ -0.88
ALMS1-202ENST00000464408 TRAV8-3A0A0A6YYJ7 113 aa9.55□□□□□ -0.88
ALMS1-202ENST00000464408 SMLR1H3BR10 107 aa9.55□□□□□ -0.88
ALMS1-202ENST00000464408 M0R381 172 aa9.55□□□□□ -0.88
ALMS1-202ENST00000464408 ARPC5O15511 151 aa9.55□□□□□ -0.88
ALMS1-202ENST00000464408 ZNF674Q2M3X9 581 aa9.55□□□□□ -0.88
ALMS1-202ENST00000464408 Q6ZSA8 131 aa9.55□□□□□ -0.88
ALMS1-202ENST00000464408 NIT1Q86X76 327 aa9.55□□□□□ -0.88
ALMS1-202ENST00000464408 SYT8Q8NBV8 401 aa9.55□□□□□ -0.88
ALMS1-202ENST00000464408 SFRP2Q96HF1 295 aa9.55□□□□□ -0.88
ALMS1-202ENST00000464408 FMC1Q96HJ9 113 aa9.55□□□□□ -0.88
ALMS1-202ENST00000464408 A0A087WWC5 75 aa9.54□□□□□ -0.88
ALMS1-202ENST00000464408 RHODO00212 210 aa9.54□□□□□ -0.88
ALMS1-202ENST00000464408 LTAP01374 205 aa9.54□□□□□ -0.88
ALMS1-202ENST00000464408 UBE2G1P62253 170 aa9.54□□□□□ -0.88
ALMS1-202ENST00000464408 LINC01559Q495D7 138 aa9.54□□□□□ -0.88
ALMS1-202ENST00000464408 CST9LP1Q5W188 147 aa9.54□□□□□ -0.88
ALMS1-202ENST00000464408 NKX6-2Q9C056 277 aaPredicted RBP9.54□□□□□ -0.88
ALMS1-202ENST00000464408 ZFP30Q9Y2G7 519 aa9.54□□□□□ -0.88
ALMS1-202ENST00000464408 PHLDA3Q9Y5J5 127 aa9.54□□□□□ -0.88
ALMS1-202ENST00000464408 C1QBP02746 253 aa9.53□□□□□ -0.88
ALMS1-202ENST00000464408 TPT1P13693 172 aaKnown RBP9.53□□□□□ -0.88
ALMS1-202ENST00000464408 RPL19P84098 196 aaKnown RBP9.53□□□□□ -0.88
ALMS1-202ENST00000464408 KLK12Q9UKR0 248 aa9.53□□□□□ -0.88
ALMS1-202ENST00000464408 IGKV2D-24A0A075B6R9 120 aa9.52□□□□□ -0.89
ALMS1-202ENST00000464408 TRBV6-1A0A0K0K1D8 114 aa9.52□□□□□ -0.89
ALMS1-202ENST00000464408 A0A1B0GV50 99 aa9.52□□□□□ -0.89
ALMS1-202ENST00000464408 PAGE4O60829 102 aa9.52□□□□□ -0.89
ALMS1-202ENST00000464408 TOR2AQ5JU69 321 aa9.52□□□□□ -0.89
ALMS1-202ENST00000464408 LINC00528Q8N1L1 170 aa9.52□□□□□ -0.89
ALMS1-202ENST00000464408 LRP1Q07954 4544 aaKnown RBP9.52□□□□□ -0.89
ALMS1-202ENST00000464408 AKR1C3P42330 323 aa9.51□□□□□ -0.89
ALMS1-202ENST00000464408 UBE2D3P61077 147 aa9.51□□□□□ -0.89
ALMS1-202ENST00000464408 UBE2D2P62837 147 aa9.51□□□□□ -0.89
ALMS1-202ENST00000464408 UBE2WQ96B02 151 aa9.51□□□□□ -0.89
ALMS1-202ENST00000464408 URGCP-MRPS24S4R325 110 aa9.51□□□□□ -0.89
ALMS1-202ENST00000464408 MUC21A0A0G2JKD1 596 aa9.5□□□□□ -0.89
ALMS1-202ENST00000464408 MUC21A0A140T8X8 626 aa9.5□□□□□ -0.89
ALMS1-202ENST00000464408 SCXQ7RTU7 201 aa9.5□□□□□ -0.89
ALMS1-202ENST00000464408 ZFP82Q8N141 532 aa9.5□□□□□ -0.89
ALMS1-202ENST00000464408 OR10AG1Q8NH19 301 aa9.5□□□□□ -0.89
ALMS1-202ENST00000464408 SCO2A0A1W2PP80 73 aa9.49□□□□□ -0.89
ALMS1-202ENST00000464408 STOML3Q8TAV4 291 aa9.49□□□□□ -0.89
ALMS1-202ENST00000464408 PKHD1L1Q86WI1 4243 aa9.49□□□□□ -0.89
ALMS1-202ENST00000464408 TRBV7-3A0A075B6L6 115 aa9.48□□□□□ -0.89
ALMS1-202ENST00000464408 TRBV10-1A0A0K0K1A3 114 aa9.48□□□□□ -0.89
ALMS1-202ENST00000464408 RBFOX3A6NFN3 312 aa9.48□□□□□ -0.89
ALMS1-202ENST00000464408 RPL36AP83881 106 aaKnown RBP9.48□□□□□ -0.89
ALMS1-202ENST00000464408 NEXN-AS1Q8NBZ9 246 aa9.48□□□□□ -0.89
ALMS1-202ENST00000464408 FAM213BQ8TBF2 198 aa9.48□□□□□ -0.89
ALMS1-202ENST00000464408 SFT2D1Q8WV19 159 aa9.48□□□□□ -0.89
ALMS1-202ENST00000464408 RPL36ALQ969Q0 106 aaKnown RBP9.48□□□□□ -0.89
ALMS1-202ENST00000464408 RMI2Q96E14 147 aa9.48□□□□□ -0.89
ALMS1-202ENST00000464408 TCEAL7Q9BRU2 100 aa9.48□□□□□ -0.89
ALMS1-202ENST00000464408 COX11Q9Y6N1 276 aa9.48□□□□□ -0.89
ALMS1-202ENST00000464408 FAT3Q8TDW7 4589 aa9.48□□□□□ -0.89
ALMS1-202ENST00000464408 A0A087WX48 190 aa9.47□□□□□ -0.89
ALMS1-202ENST00000464408 J3QL48 77 aa9.47□□□□□ -0.89
ALMS1-202ENST00000464408 ZNF56Q15929 161 aa9.47□□□□□ -0.89
ALMS1-202ENST00000464408 MPV17L2Q567V2 206 aa9.47□□□□□ -0.89
ALMS1-202ENST00000464408 ENHOQ6UWT2 76 aa9.47□□□□□ -0.89
ALMS1-202ENST00000464408 Q8N976 141 aa9.47□□□□□ -0.89
ALMS1-202ENST00000464408 OR10G8Q8NGN5 311 aa9.47□□□□□ -0.89
ALMS1-202ENST00000464408 TRBV6-8A0A0A6YYG3 113 aa9.46□□□□□ -0.9
ALMS1-202ENST00000464408 PLA2G1BP04054 148 aaKnown RBP9.46□□□□□ -0.9
ALMS1-202ENST00000464408 SSTP61278 116 aa9.46□□□□□ -0.9
ALMS1-202ENST00000464408 RGS21Q2M5E4 152 aa9.46□□□□□ -0.9
ALMS1-202ENST00000464408 PRR27Q6MZM9 219 aa9.46□□□□□ -0.9
ALMS1-202ENST00000464408 ATRAIDQ6UW56 229 aa9.46□□□□□ -0.9
ALMS1-202ENST00000464408 KCNRGQ8N5I3 272 aa9.46□□□□□ -0.9
ALMS1-202ENST00000464408 MBD3L1Q8WWY6 194 aa9.46□□□□□ -0.9
ALMS1-202ENST00000464408 MLST8Q9BVC4 326 aa9.46□□□□□ -0.9
ALMS1-202ENST00000464408 TMEM262E9PQX1 116 aa9.45□□□□□ -0.9
ALMS1-202ENST00000464408 KRTAP10-4P60372 401 aaPredicted RBP9.45□□□□□ -0.9
ALMS1-202ENST00000464408 RAB4BP61018 213 aa9.45□□□□□ -0.9
ALMS1-202ENST00000464408 C15orf54Q8N8G6 183 aa9.45□□□□□ -0.9
ALMS1-202ENST00000464408 CHCHD7Q9BUK0 85 aa9.45□□□□□ -0.9
ALMS1-202ENST00000464408 SNAI2O43623 268 aa9.44□□□□□ -0.9
ALMS1-202ENST00000464408 SEC11BP0C7V7 166 aa9.44□□□□□ -0.9
ALMS1-202ENST00000464408 ZNF345Q14585 488 aa9.44□□□□□ -0.9
ALMS1-202ENST00000464408 NTM-AS1Q6ZSK4 140 aa9.44□□□□□ -0.9
ALMS1-202ENST00000464408 BAGE2Q86Y30 109 aa9.44□□□□□ -0.9
ALMS1-202ENST00000464408 CIRBP-AS1Q8TBR5 109 aa9.44□□□□□ -0.9
ALMS1-202ENST00000464408 CHAC1Q9BUX1 264 aa9.44□□□□□ -0.9
ALMS1-202ENST00000464408 SSBP4Q9BWG4 385 aaPredicted RBP9.44□□□□□ -0.9
ALMS1-202ENST00000464408 ZNF471Q9BX82 626 aaPredicted RBP9.44□□□□□ -0.9
ALMS1-202ENST00000464408 ELOBQ15370 118 aa9.43□□□□□ -0.9
ALMS1-202ENST00000464408 KCNIP4Q6PIL6 250 aa9.43□□□□□ -0.9
ALMS1-202ENST00000464408 DERL1Q9BUN8 251 aa9.43□□□□□ -0.9
ALMS1-202ENST00000464408 PFDN1O60925 122 aa9.42□□□□□ -0.9
ALMS1-202ENST00000464408 ANGP03950 147 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms