RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 A0A0J9YX75 114 aa10.74□□□□□ -0.69
COL5A1-205ENST00000464187 TCAPO15273 167 aa10.74□□□□□ -0.69
COL5A1-205ENST00000464187 STPG4Q8N801 248 aa10.74□□□□□ -0.69
COL5A1-205ENST00000464187 ODF3Q96PU9 254 aa10.74□□□□□ -0.69
COL5A1-205ENST00000464187 NXPH4O95158 308 aa10.73□□□□□ -0.69
COL5A1-205ENST00000464187 COL5A1-AS1Q5SY13 56 aa10.73□□□□□ -0.69
COL5A1-205ENST00000464187 SLC25A34Q6PIV7 304 aa10.73□□□□□ -0.69
COL5A1-205ENST00000464187 TMEM158Q8WZ71 300 aa10.73□□□□□ -0.69
COL5A1-205ENST00000464187 C18orf15Q96N68 181 aa10.73□□□□□ -0.69
COL5A1-205ENST00000464187 DPH3P1Q9H4G8 78 aa10.73□□□□□ -0.69
COL5A1-205ENST00000464187 ZNF256Q9Y2P7 627 aaPredicted RBP10.73□□□□□ -0.69
COL5A1-205ENST00000464187 C7orf71A4D174 169 aa10.72□□□□□ -0.69
COL5A1-205ENST00000464187 IGLV1-51P01701 117 aa10.72□□□□□ -0.69
COL5A1-205ENST00000464187 HINT1P49773 126 aaPredicted RBP10.72□□□□□ -0.69
COL5A1-205ENST00000464187 C14orf178Q8N769 122 aaPredicted RBP10.72□□□□□ -0.69
COL5A1-205ENST00000464187 TRRAPQ9Y4A5 3859 aa10.72□□□□□ -0.69
COL5A1-205ENST00000464187 TRAV12-3A0A0B4J271 114 aa10.72□□□□□ -0.69
COL5A1-205ENST00000464187 FAM159AQ6UWV7 190 aa10.72□□□□□ -0.69
COL5A1-205ENST00000464187 RASL10AQ92737 203 aa10.72□□□□□ -0.69
COL5A1-205ENST00000464187 DEFB131AP59861 70 aa10.71□□□□□ -0.69
COL5A1-205ENST00000464187 ANKRD39Q53RE8 183 aa10.71□□□□□ -0.69
COL5A1-205ENST00000464187 C3orf56Q8N813 242 aa10.71□□□□□ -0.69
COL5A1-205ENST00000464187 SPATA3Q8NHX4 192 aa10.71□□□□□ -0.69
COL5A1-205ENST00000464187 AP1S3Q96PC3 154 aa10.71□□□□□ -0.69
COL5A1-205ENST00000464187 SORL1Q92673 2214 aa10.71□□□□□ -0.7
COL5A1-205ENST00000464187 VWFP04275 2813 aa10.7□□□□□ -0.7
COL5A1-205ENST00000464187 IGKV3-20P01619 116 aa10.7□□□□□ -0.7
COL5A1-205ENST00000464187 LAGE3Q14657 143 aa10.7□□□□□ -0.7
COL5A1-205ENST00000464187 SMIM2Q9BVW6 85 aa10.7□□□□□ -0.7
COL5A1-205ENST00000464187 MGPP08493 103 aa10.7□□□□□ -0.7
COL5A1-205ENST00000464187 COX8AP10176 69 aa10.7□□□□□ -0.7
COL5A1-205ENST00000464187 MAP6D1Q9H9H5 199 aa10.7□□□□□ -0.7
COL5A1-205ENST00000464187 DKK2Q9UBU2 259 aa10.7□□□□□ -0.7
COL5A1-205ENST00000464187 TRAV12-2A0A075B6T6 113 aa10.69□□□□□ -0.7
COL5A1-205ENST00000464187 C12orf54Q6X4T0 127 aa10.69□□□□□ -0.7
COL5A1-205ENST00000464187 FOXI2Q6ZQN5 318 aa10.69□□□□□ -0.7
COL5A1-205ENST00000464187 RPL39LQ96EH5 51 aaKnown RBP10.69□□□□□ -0.7
COL5A1-205ENST00000464187 CD7P09564 240 aa10.68□□□□□ -0.7
COL5A1-205ENST00000464187 SMIM17P0DL12 118 aa10.68□□□□□ -0.7
COL5A1-205ENST00000464187 G0S2P27469 103 aa10.68□□□□□ -0.7
COL5A1-205ENST00000464187 ODF1Q14990 250 aa10.68□□□□□ -0.7
COL5A1-205ENST00000464187 ZNF124Q15973 351 aa10.68□□□□□ -0.7
COL5A1-205ENST00000464187 POM121L12Q8N7R1 296 aa10.68□□□□□ -0.7
COL5A1-205ENST00000464187 KIF25-AS1Q9Y6Z4 181 aa10.68□□□□□ -0.7
COL5A1-205ENST00000464187 DUSP14O95147 198 aaKnown RBP10.68□□□□□ -0.7
COL5A1-205ENST00000464187 FGF6P10767 208 aa10.68□□□□□ -0.7
COL5A1-205ENST00000464187 ZNF25P17030 456 aaPredicted RBP10.68□□□□□ -0.7
COL5A1-205ENST00000464187 SUMO2P61956 95 aaKnown RBP10.68□□□□□ -0.7
COL5A1-205ENST00000464187 SPINK13Q1W4C9 94 aa10.68□□□□□ -0.7
COL5A1-205ENST00000464187 ODF3L2Q3SX64 289 aa10.68□□□□□ -0.7
COL5A1-205ENST00000464187 KNCNA6PVL3 124 aa10.67□□□□□ -0.7
COL5A1-205ENST00000464187 CDKN1BP46527 198 aa10.67□□□□□ -0.7
COL5A1-205ENST00000464187 INSL3P51460 131 aa10.67□□□□□ -0.7
COL5A1-205ENST00000464187 LINC00315P59091 139 aa10.67□□□□□ -0.7
COL5A1-205ENST00000464187 SHISA2Q6UWI4 295 aa10.67□□□□□ -0.7
COL5A1-205ENST00000464187 AMTNQ6UX39 209 aa10.67□□□□□ -0.7
COL5A1-205ENST00000464187 C2orf91Q6ZV80 131 aa10.67□□□□□ -0.7
COL5A1-205ENST00000464187 C20orf78Q9BR46 151 aa10.67□□□□□ -0.7
COL5A1-205ENST00000464187 IGHV3-16A0A0C4DH30 117 aa10.66□□□□□ -0.7
COL5A1-205ENST00000464187 ATP5LO75964 103 aa10.66□□□□□ -0.7
COL5A1-205ENST00000464187 C9orf66Q5T8R8 295 aa10.66□□□□□ -0.7
COL5A1-205ENST00000464187 C9orf85Q96MD7 179 aa10.66□□□□□ -0.7
COL5A1-205ENST00000464187 ZMAT4Q9H898 229 aa10.66□□□□□ -0.7
COL5A1-205ENST00000464187 JPT2Q9H910 190 aa10.66□□□□□ -0.7
COL5A1-205ENST00000464187 PRSS1P07477 247 aa10.65□□□□□ -0.7
COL5A1-205ENST00000464187 HLA-DRB4P13762 266 aa10.65□□□□□ -0.7
COL5A1-205ENST00000464187 MPV17L2Q567V2 206 aa10.65□□□□□ -0.7
COL5A1-205ENST00000464187 WFDC9Q8NEX5 89 aa10.65□□□□□ -0.7
COL5A1-205ENST00000464187 HLA-DRB4X5D2U9 266 aa10.65□□□□□ -0.7
COL5A1-205ENST00000464187 NOTCH3Q9UM47 2321 aa10.65□□□□□ -0.7
COL5A1-205ENST00000464187 OR11H12B2RN74 326 aa10.65□□□□□ -0.71
COL5A1-205ENST00000464187 H3BMM0 161 aa10.65□□□□□ -0.71
COL5A1-205ENST00000464187 NUDT3O95989 172 aa10.65□□□□□ -0.71
COL5A1-205ENST00000464187 TCTAP57738 103 aa10.65□□□□□ -0.71
COL5A1-205ENST00000464187 BEAN1Q3B7T3 259 aa10.65□□□□□ -0.71
COL5A1-205ENST00000464187 TMEM208Q9BTX3 173 aa10.65□□□□□ -0.71
COL5A1-205ENST00000464187 MDFICQ9P1T7 246 aa10.65□□□□□ -0.71
COL5A1-205ENST00000464187 COL6A5A8TX70 2615 aa10.64□□□□□ -0.71
COL5A1-205ENST00000464187 STAB1Q9NY15 2570 aa10.64□□□□□ -0.71
COL5A1-205ENST00000464187 IGHV1OR15-1A0A075B7D0 117 aa10.64□□□□□ -0.71
COL5A1-205ENST00000464187 Q8N1Y9 231 aa10.64□□□□□ -0.71
COL5A1-205ENST00000464187 ORMDL2Q53FV1 153 aa10.63□□□□□ -0.71
COL5A1-205ENST00000464187 BVES-AS1Q5T3Y7 98 aa10.63□□□□□ -0.71
COL5A1-205ENST00000464187 A0A087WWL8 130 aa10.63□□□□□ -0.71
COL5A1-205ENST00000464187 A8MTW9 85 aa10.63□□□□□ -0.71
COL5A1-205ENST00000464187 DLEU1O43261 78 aa10.63□□□□□ -0.71
COL5A1-205ENST00000464187 PPP1R17O96001 155 aa10.63□□□□□ -0.71
COL5A1-205ENST00000464187 SUMO4Q6EEV6 95 aa10.63□□□□□ -0.71
COL5A1-205ENST00000464187 BOD1L2Q8IYS8 172 aa10.63□□□□□ -0.71
COL5A1-205ENST00000464187 K7EMI3 77 aa10.62□□□□□ -0.71
COL5A1-205ENST00000464187 IGKCP01834 107 aa10.62□□□□□ -0.71
COL5A1-205ENST00000464187 RBMY1A1P0DJD3 496 aaKnown RBP10.62□□□□□ -0.71
COL5A1-205ENST00000464187 RBMY1CP0DJD4 496 aa10.62□□□□□ -0.71
COL5A1-205ENST00000464187 CMC4P56277 68 aaPredicted RBP10.62□□□□□ -0.71
COL5A1-205ENST00000464187 RBMY1FQ15415 496 aaKnown RBP10.62□□□□□ -0.71
COL5A1-205ENST00000464187 TOMM6Q96B49 74 aa10.62□□□□□ -0.71
COL5A1-205ENST00000464187 HHLA3Q9XRX5 114 aa10.62□□□□□ -0.71
COL5A1-205ENST00000464187 DPM2O94777 84 aa10.61□□□□□ -0.71
COL5A1-205ENST00000464187 GAGE1Q13065 139 aa10.61□□□□□ -0.71
COL5A1-205ENST00000464187 FAM110AQ9BQ89 295 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms