RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 MARF1Q9Y4F3 1742 aaKnown RBP1.94□□□□□ -2.1
ITGB1-208ENST00000464001 CTTNBP2Q8WZ74 1663 aa1.94□□□□□ -2.1
ITGB1-208ENST00000464001 DLG5Q8TDM6 1919 aa1.94□□□□□ -2.1
ITGB1-208ENST00000464001 UBE2L5PA0A1B0GUS4 154 aa1.94□□□□□ -2.1
ITGB1-208ENST00000464001 IGLC1P0CG04 106 aa1.94□□□□□ -2.1
ITGB1-208ENST00000464001 POLR2JP52435 117 aaKnown RBP1.94□□□□□ -2.1
ITGB1-208ENST00000464001 UBE2L3P68036 154 aaKnown RBP1.94□□□□□ -2.1
ITGB1-208ENST00000464001 Q1T7F1 81 aa1.94□□□□□ -2.1
ITGB1-208ENST00000464001 SPRNQ5BIV9 151 aa1.94□□□□□ -2.1
ITGB1-208ENST00000464001 SLC48A1Q6P1K1 146 aa1.94□□□□□ -2.1
ITGB1-208ENST00000464001 PLXNA1Q9UIW2 1896 aa1.94□□□□□ -2.1
ITGB1-208ENST00000464001 UNC13CQ8NB66 2214 aa1.94□□□□□ -2.1
ITGB1-208ENST00000464001 PXDNLA1KZ92 1463 aa1.94□□□□□ -2.1
ITGB1-208ENST00000464001 FREM1Q5H8C1 2179 aa1.93□□□□□ -2.1
ITGB1-208ENST00000464001 RTEL1-TNFRSF6BF6WH68 1400 aa1.93□□□□□ -2.1
ITGB1-208ENST00000464001 SCAPERQ9BY12 1400 aa1.93□□□□□ -2.1
ITGB1-208ENST00000464001 SPTBP11277 2137 aa1.93□□□□□ -2.1
ITGB1-208ENST00000464001 ABCC3O15438 1527 aa1.93□□□□□ -2.1
ITGB1-208ENST00000464001 PDCD11Q14690 1871 aaKnown RBP1.93□□□□□ -2.1
ITGB1-208ENST00000464001 TRAV2A0A0B4J234 112 aa1.93□□□□□ -2.1
ITGB1-208ENST00000464001 LINC00032P0C843 101 aa1.93□□□□□ -2.1
ITGB1-208ENST00000464001 CNBPP62633 177 aaKnown RBP1.93□□□□□ -2.1
ITGB1-208ENST00000464001 DCDP81605 110 aaKnown RBP1.93□□□□□ -2.1
ITGB1-208ENST00000464001 RHOHQ15669 191 aa1.93□□□□□ -2.1
ITGB1-208ENST00000464001 IGFBP7Q16270 282 aa1.93□□□□□ -2.1
ITGB1-208ENST00000464001 PRR9Q5T870 116 aa1.93□□□□□ -2.1
ITGB1-208ENST00000464001 SHANK2Q9UPX8 1470 aa1.93□□□□□ -2.1
ITGB1-208ENST00000464001 STRCP1A6NGW2 1772 aa1.93□□□□□ -2.1
ITGB1-208ENST00000464001 DAPK1P53355 1430 aa1.92□□□□□ -2.1
ITGB1-208ENST00000464001 NRXN2Q9P2S2 1712 aa1.92□□□□□ -2.1
ITGB1-208ENST00000464001 TRBV6-8A0A0A6YYG3 113 aa1.92□□□□□ -2.1
ITGB1-208ENST00000464001 H3BQF6 201 aa1.92□□□□□ -2.1
ITGB1-208ENST00000464001 GNGT2O14610 69 aa1.92□□□□□ -2.1
ITGB1-208ENST00000464001 RNASE2P10153 161 aaKnown RBP1.92□□□□□ -2.1
ITGB1-208ENST00000464001 CBLN1P23435 193 aa1.92□□□□□ -2.1
ITGB1-208ENST00000464001 ATP5EP56381 51 aaPredicted RBP1.92□□□□□ -2.1
ITGB1-208ENST00000464001 KRTAP12-3P60328 96 aa1.92□□□□□ -2.1
ITGB1-208ENST00000464001 Q0VG73 95 aa1.92□□□□□ -2.1
ITGB1-208ENST00000464001 IQCJQ1A5X6 159 aa1.92□□□□□ -2.1
ITGB1-208ENST00000464001 C9orf116Q5BN46 136 aaPredicted RBP1.92□□□□□ -2.1
ITGB1-208ENST00000464001 CSAG1Q6PB30 78 aa1.92□□□□□ -2.1
ITGB1-208ENST00000464001 SPTSSBQ8NFR3 76 aa1.92□□□□□ -2.1
ITGB1-208ENST00000464001 C10orf82Q8WW14 230 aa1.92□□□□□ -2.1
ITGB1-208ENST00000464001 LINC00052Q96N35 136 aa1.92□□□□□ -2.1
ITGB1-208ENST00000464001 LIMD2Q9BT23 127 aa1.92□□□□□ -2.1
ITGB1-208ENST00000464001 ATG5Q9H1Y0 275 aa1.92□□□□□ -2.1
ITGB1-208ENST00000464001 LINC00474Q9P2X8 69 aa1.92□□□□□ -2.1
ITGB1-208ENST00000464001 LOC285556D6RIA3 1793 aa1.92□□□□□ -2.1
ITGB1-208ENST00000464001 MAP3K1Q13233 1512 aa1.91□□□□□ -2.1
ITGB1-208ENST00000464001 UBR1Q8IWV7 1749 aa1.91□□□□□ -2.1
ITGB1-208ENST00000464001 DLEC1Q9Y238 1755 aa1.91□□□□□ -2.1
ITGB1-208ENST00000464001 DNMBPQ6XZF7 1577 aa1.91□□□□□ -2.1
ITGB1-208ENST00000464001 IFT140Q96RY7 1462 aa1.91□□□□□ -2.1
ITGB1-208ENST00000464001 ANKRD36BQ8N2N9 1353 aa1.91□□□□□ -2.1
ITGB1-208ENST00000464001 CXorf51AA0A1B0GTR3 108 aa1.91□□□□□ -2.1
ITGB1-208ENST00000464001 TMEM30CPA0ZSE6 113 aa1.91□□□□□ -2.1
ITGB1-208ENST00000464001 F8W1H4 67 aa1.91□□□□□ -2.1
ITGB1-208ENST00000464001 SSSCA1O60232 199 aa1.91□□□□□ -2.1
ITGB1-208ENST00000464001 RPL7L1Q6DKI1 246 aaKnown RBP1.91□□□□□ -2.1
ITGB1-208ENST00000464001 UNQ5815/PRO19632Q6UWF5 114 aa1.91□□□□□ -2.1
ITGB1-208ENST00000464001 COMMD6Q7Z4G1 85 aa1.91□□□□□ -2.1
ITGB1-208ENST00000464001 ZNF431Q8TF32 576 aaPredicted RBP1.91□□□□□ -2.1
ITGB1-208ENST00000464001 PPDPFLQ8WWR9 84 aa1.91□□□□□ -2.1
ITGB1-208ENST00000464001 PATE1Q8WXA2 126 aa1.91□□□□□ -2.1
ITGB1-208ENST00000464001 NPVFQ9HCQ7 196 aa1.91□□□□□ -2.1
ITGB1-208ENST00000464001 SUPT6HQ7KZ85 1726 aaKnown RBP1.91□□□□□ -2.1
ITGB1-208ENST00000464001 DOCK10Q96BY6 2186 aa1.91□□□□□ -2.1
ITGB1-208ENST00000464001 MDC1Q14676 2089 aaKnown RBP1.9□□□□□ -2.1
ITGB1-208ENST00000464001 FN1P02751 2386 aaKnown RBP1.9□□□□□ -2.11
ITGB1-208ENST00000464001 AFDNP55196 1824 aaKnown RBP1.9□□□□□ -2.11
ITGB1-208ENST00000464001 TNRC6BQ9UPQ9 1833 aaKnown RBP1.9□□□□□ -2.11
ITGB1-208ENST00000464001 UQCRHLA0A096LP55 91 aa1.9□□□□□ -2.11
ITGB1-208ENST00000464001 hADV29S1A0JD25 119 aa1.9□□□□□ -2.11
ITGB1-208ENST00000464001 CCL16O15467 120 aa1.9□□□□□ -2.11
ITGB1-208ENST00000464001 UQCRHP07919 91 aa1.9□□□□□ -2.11
ITGB1-208ENST00000464001 LYPD5Q6UWN5 251 aa1.9□□□□□ -2.11
ITGB1-208ENST00000464001 OR10AG1Q8NH19 301 aa1.9□□□□□ -2.11
ITGB1-208ENST00000464001 LCN9Q8WX39 176 aa1.9□□□□□ -2.11
ITGB1-208ENST00000464001 TVP23CQ96ET8 276 aa1.9□□□□□ -2.11
ITGB1-208ENST00000464001 PMCHL2Q9BQD1 86 aa1.9□□□□□ -2.11
ITGB1-208ENST00000464001 ORMDL1Q9P0S3 153 aa1.9□□□□□ -2.11
ITGB1-208ENST00000464001 GBF1Q92538 1859 aa1.9□□□□□ -2.11
ITGB1-208ENST00000464001 ARFGEF3Q5TH69 2177 aa1.89□□□□□ -2.11
ITGB1-208ENST00000464001 GOLGA3Q08378 1498 aa1.89□□□□□ -2.11
ITGB1-208ENST00000464001 COL5A3P25940 1745 aaPredicted RBP1.89□□□□□ -2.11
ITGB1-208ENST00000464001 IGKV2-24A0A0C4DH68 120 aa1.89□□□□□ -2.11
ITGB1-208ENST00000464001 TRBV10-3A0A0K0K1G6 114 aa1.89□□□□□ -2.11
ITGB1-208ENST00000464001 A6NIN4 97 aa1.89□□□□□ -2.11
ITGB1-208ENST00000464001 H3BQ15 152 aa1.89□□□□□ -2.11
ITGB1-208ENST00000464001 H3BRN7 92 aa1.89□□□□□ -2.11
ITGB1-208ENST00000464001 IGHV3-33P01772 117 aa1.89□□□□□ -2.11
ITGB1-208ENST00000464001 CCKP06307 115 aa1.89□□□□□ -2.11
ITGB1-208ENST00000464001 IFI27L1Q96BM0 104 aa1.89□□□□□ -2.11
ITGB1-208ENST00000464001 KDM5DQ9BY66 1539 aa1.89□□□□□ -2.11
ITGB1-208ENST00000464001 CLTCQ00610 1675 aaKnown RBP1.89□□□□□ -2.11
ITGB1-208ENST00000464001 RREB1Q92766 1687 aa1.89□□□□□ -2.11
ITGB1-208ENST00000464001 CDK12Q9NYV4 1490 aaPredicted RBP1.88□□□□□ -2.11
ITGB1-208ENST00000464001 TOP2BQ02880 1626 aa1.88□□□□□ -2.11
ITGB1-208ENST00000464001 DOCK11Q5JSL3 2073 aa1.88□□□□□ -2.11
ITGB1-208ENST00000464001 TRAV13-2A0A0B4J235 113 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms