RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 F2Z2F3 143 aa13.13□□□□□ -0.31
LMNB1-204ENST00000463908 P0DMU3 169 aa13.13□□□□□ -0.31
LMNB1-204ENST00000463908 FAM231AP0DMU4 169 aa13.13□□□□□ -0.31
LMNB1-204ENST00000463908 FAM231CP0DMU5 169 aa13.13□□□□□ -0.31
LMNB1-204ENST00000463908 ADIRFQ15847 76 aa13.13□□□□□ -0.31
LMNB1-204ENST00000463908 LOC100131303A0A0U1RQF7 123 aa13.12□□□□□ -0.31
LMNB1-204ENST00000463908 CTRLP40313 264 aa13.12□□□□□ -0.31
LMNB1-204ENST00000463908 CT83Q5H943 113 aa13.12□□□□□ -0.31
LMNB1-204ENST00000463908 V9GYV3 84 aa13.12□□□□□ -0.31
LMNB1-204ENST00000463908 TRBV6-4A0A1B0GX49 114 aa13.11□□□□□ -0.31
LMNB1-204ENST00000463908 LINC00862A6NCI5 91 aa13.11□□□□□ -0.31
LMNB1-204ENST00000463908 A8MWL6 223 aa13.11□□□□□ -0.31
LMNB1-204ENST00000463908 K7EQD1 137 aa13.11□□□□□ -0.31
LMNB1-204ENST00000463908 GYPEP15421 78 aa13.11□□□□□ -0.31
LMNB1-204ENST00000463908 FOXA3P55318 350 aaPredicted RBP13.11□□□□□ -0.31
LMNB1-204ENST00000463908 ESRGQ1W209 222 aa13.11□□□□□ -0.31
LMNB1-204ENST00000463908 FAM74A4Q5TZK3 123 aa13.11□□□□□ -0.31
LMNB1-204ENST00000463908 UQCC3Q6UW78 93 aa13.11□□□□□ -0.31
LMNB1-204ENST00000463908 Q9UF83 564 aa13.11□□□□□ -0.31
LMNB1-204ENST00000463908 KIF25-AS1Q9Y6Z4 181 aa13.11□□□□□ -0.31
LMNB1-204ENST00000463908 NTF3P20783 257 aa13.1□□□□□ -0.31
LMNB1-204ENST00000463908 CACNG7P62955 275 aa13.1□□□□□ -0.31
LMNB1-204ENST00000463908 RNF212Q495C1 297 aa13.1□□□□□ -0.31
LMNB1-204ENST00000463908 WDR73Q6P4I2 378 aa13.1□□□□□ -0.31
LMNB1-204ENST00000463908 COMMD7Q86VX2 200 aa13.1□□□□□ -0.31
LMNB1-204ENST00000463908 C14orf178Q8N769 122 aaPredicted RBP13.1□□□□□ -0.31
LMNB1-204ENST00000463908 OR10G8Q8NGN5 311 aa13.1□□□□□ -0.31
LMNB1-204ENST00000463908 CNFNQ9BYD5 112 aa13.1□□□□□ -0.31
LMNB1-204ENST00000463908 ICOSQ9Y6W8 199 aa13.1□□□□□ -0.31
LMNB1-204ENST00000463908 LINC00315P59091 139 aa13.09□□□□□ -0.31
LMNB1-204ENST00000463908 MRPL23Q16540 153 aaKnown RBP13.09□□□□□ -0.31
LMNB1-204ENST00000463908 C15orf54Q8N8G6 183 aa13.09□□□□□ -0.31
LMNB1-204ENST00000463908 TSKUQ8WUA8 353 aa13.09□□□□□ -0.31
LMNB1-204ENST00000463908 LINC00588Q9Y4M8 146 aa13.09□□□□□ -0.31
LMNB1-204ENST00000463908 TMEM218A2RU14 115 aa13.08□□□□□ -0.32
LMNB1-204ENST00000463908 RHODO00212 210 aa13.08□□□□□ -0.32
LMNB1-204ENST00000463908 PGLYRP4Q96LB8 373 aa13.08□□□□□ -0.32
LMNB1-204ENST00000463908 FRAS1Q86XX4 4008 aa13.07□□□□□ -0.32
LMNB1-204ENST00000463908 ADCYAP1P18509 176 aa13.07□□□□□ -0.32
LMNB1-204ENST00000463908 RHOHQ15669 191 aa13.07□□□□□ -0.32
LMNB1-204ENST00000463908 PRADC1Q9BSG0 188 aa13.07□□□□□ -0.32
LMNB1-204ENST00000463908 GFRA4Q9GZZ7 299 aa13.07□□□□□ -0.32
LMNB1-204ENST00000463908 FAM231BA6NCW3 169 aa13.06□□□□□ -0.32
LMNB1-204ENST00000463908 EVI2AP22794 236 aa13.06□□□□□ -0.32
LMNB1-204ENST00000463908 CCL18P55774 89 aa13.06□□□□□ -0.32
LMNB1-204ENST00000463908 LYPD5Q6UWN5 251 aa13.06□□□□□ -0.32
LMNB1-204ENST00000463908 HIGD1CA8MV81 97 aa13.05□□□□□ -0.32
LMNB1-204ENST00000463908 SRIP30626 198 aa13.05□□□□□ -0.32
LMNB1-204ENST00000463908 RAB4BP61018 213 aa13.05□□□□□ -0.32
LMNB1-204ENST00000463908 TWIST1Q15672 202 aa13.05□□□□□ -0.32
LMNB1-204ENST00000463908 NEGR1Q7Z3B1 354 aa13.05□□□□□ -0.32
LMNB1-204ENST00000463908 UBE2DNLQ8IWF7 75 aa13.05□□□□□ -0.32
LMNB1-204ENST00000463908 AP1S3Q96PC3 154 aa13.05□□□□□ -0.32
LMNB1-204ENST00000463908 KRTAP17-1Q9BYP8 105 aa13.04□□□□□ -0.32
LMNB1-204ENST00000463908 PNRC1Q12796 327 aaPredicted RBP13.03□□□□□ -0.32
LMNB1-204ENST00000463908 NUP35Q8NFH5 326 aa13.03□□□□□ -0.32
LMNB1-204ENST00000463908 ZNRF2Q8NHG8 242 aa13.03□□□□□ -0.32
LMNB1-204ENST00000463908 SMIM27A0A1W2PRY6 76 aa13.02□□□□□ -0.33
LMNB1-204ENST00000463908 GAGE12JA6NER3 117 aa13.02□□□□□ -0.33
LMNB1-204ENST00000463908 F8W036 122 aa13.02□□□□□ -0.33
LMNB1-204ENST00000463908 TRGC1P0CF51 173 aa13.02□□□□□ -0.33
LMNB1-204ENST00000463908 SMIM17P0DL12 118 aa13.02□□□□□ -0.33
LMNB1-204ENST00000463908 LINC00694P0DN24 101 aa13.02□□□□□ -0.33
LMNB1-204ENST00000463908 FAM3BP58499 235 aaPredicted RBP13.02□□□□□ -0.33
LMNB1-204ENST00000463908 GAGE1Q13065 139 aa13.02□□□□□ -0.33
LMNB1-204ENST00000463908 GAGE4Q13068 117 aa13.02□□□□□ -0.33
LMNB1-204ENST00000463908 GAGE5Q13069 117 aa13.02□□□□□ -0.33
LMNB1-204ENST00000463908 GAGE13Q4V321 117 aa13.02□□□□□ -0.33
LMNB1-204ENST00000463908 F5H697 171 aa13.01□□□□□ -0.33
LMNB1-204ENST00000463908 ZNF56Q15929 161 aa13.01□□□□□ -0.33
LMNB1-204ENST00000463908 MRPS16Q9Y3D3 137 aaKnown RBP13.01□□□□□ -0.33
LMNB1-204ENST00000463908 KMT2AQ03164 3969 aa13.01□□□□□ -0.33
LMNB1-204ENST00000463908 A0A1B0GUT8 65 aa13□□□□□ -0.33
LMNB1-204ENST00000463908 SH2D6Q7Z4S9 175 aa13□□□□□ -0.33
LMNB1-204ENST00000463908 UPK3BQ9BT76 320 aa13□□□□□ -0.33
LMNB1-204ENST00000463908 SEC11CQ9BY50 192 aa13□□□□□ -0.33
LMNB1-204ENST00000463908 NAT8BQ9UHF3 227 aa13□□□□□ -0.33
LMNB1-204ENST00000463908 TRBV10-1A0A0K0K1A3 114 aa12.99□□□□□ -0.33
LMNB1-204ENST00000463908 MGPP08493 103 aa12.99□□□□□ -0.33
LMNB1-204ENST00000463908 C10orf91Q5T1B1 145 aa12.99□□□□□ -0.33
LMNB1-204ENST00000463908 DPH3P1Q9H4G8 78 aa12.99□□□□□ -0.33
LMNB1-204ENST00000463908 Q9H8V8 135 aa12.99□□□□□ -0.33
LMNB1-204ENST00000463908 IGLV2-18A0A075B6J9 118 aa12.98□□□□□ -0.33
LMNB1-204ENST00000463908 M0QY20 66 aa12.98□□□□□ -0.33
LMNB1-204ENST00000463908 SUMO4Q6EEV6 95 aa12.98□□□□□ -0.33
LMNB1-204ENST00000463908 NEXN-AS1Q8NBZ9 246 aa12.98□□□□□ -0.33
LMNB1-204ENST00000463908 ATP6V0E2Q8NHE4 81 aa12.98□□□□□ -0.33
LMNB1-204ENST00000463908 PPP1R2P9O14990 202 aa12.97□□□□□ -0.33
LMNB1-204ENST00000463908 TIRAPP58753 221 aa12.97□□□□□ -0.33
LMNB1-204ENST00000463908 BORCS7Q96B45 105 aa12.97□□□□□ -0.33
LMNB1-204ENST00000463908 HERC2O95714 4834 aa12.97□□□□□ -0.33
LMNB1-204ENST00000463908 TRBV7-3A0A075B6L6 115 aa12.96□□□□□ -0.33
LMNB1-204ENST00000463908 M0R2N4 97 aa12.96□□□□□ -0.33
LMNB1-204ENST00000463908 MT-ND4LP03901 98 aa12.96□□□□□ -0.33
LMNB1-204ENST00000463908 ANAPC16Q96DE5 110 aa12.96□□□□□ -0.33
LMNB1-204ENST00000463908 GTSF1LQ9H1H1 148 aa12.96□□□□□ -0.33
LMNB1-204ENST00000463908 DNAH6Q9C0G6 4158 aa12.95□□□□□ -0.34
LMNB1-204ENST00000463908 UBE2D3P61077 147 aa12.95□□□□□ -0.34
LMNB1-204ENST00000463908 UBE2D2P62837 147 aa12.95□□□□□ -0.34
LMNB1-204ENST00000463908 RPL36AP83881 106 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms