RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 A0A1W2PRE2 83 aa11.18□□□□□ -0.62
HMGN1-209ENST00000463631 B4DEV8 164 aa11.18□□□□□ -0.62
HMGN1-209ENST00000463631 CXorf1O96002 111 aa11.18□□□□□ -0.62
HMGN1-209ENST00000463631 MBP02144 154 aa11.18□□□□□ -0.62
HMGN1-209ENST00000463631 HNRNPA3P51991 378 aaKnown RBP11.18□□□□□ -0.62
HMGN1-209ENST00000463631 FAM74A4Q5TZK3 123 aa11.18□□□□□ -0.62
HMGN1-209ENST00000463631 KCNIP4Q6PIL6 250 aa11.18□□□□□ -0.62
HMGN1-209ENST00000463631 OR11H4Q8NGC9 324 aa11.18□□□□□ -0.62
HMGN1-209ENST00000463631 DAZAP1Q96EP5 407 aaKnown RBP11.18□□□□□ -0.62
HMGN1-209ENST00000463631 SFRP2Q96HF1 295 aa11.18□□□□□ -0.62
HMGN1-209ENST00000463631 KRBOX1C9JBD0 128 aa11.17□□□□□ -0.62
HMGN1-209ENST00000463631 UBE2D3P61077 147 aa11.17□□□□□ -0.62
HMGN1-209ENST00000463631 UBE2D2P62837 147 aa11.17□□□□□ -0.62
HMGN1-209ENST00000463631 SERF2P84101 59 aa11.17□□□□□ -0.62
HMGN1-209ENST00000463631 Q86TA4 180 aa11.17□□□□□ -0.62
HMGN1-209ENST00000463631 HSD17B11Q8NBQ5 300 aa11.17□□□□□ -0.62
HMGN1-209ENST00000463631 ARMS2P0C7Q2 107 aa11.16□□□□□ -0.62
HMGN1-209ENST00000463631 IFITM3Q01628 133 aa11.16□□□□□ -0.62
HMGN1-209ENST00000463631 COX8CQ7Z4L0 72 aa11.16□□□□□ -0.62
HMGN1-209ENST00000463631 OR10G8Q8NGN5 311 aa11.16□□□□□ -0.62
HMGN1-209ENST00000463631 TRBV7-3A0A075B6L6 115 aa11.15□□□□□ -0.62
HMGN1-209ENST00000463631 A0A087WWL8 130 aa11.15□□□□□ -0.62
HMGN1-209ENST00000463631 TRAV34A0A0B4J273 112 aa11.15□□□□□ -0.62
HMGN1-209ENST00000463631 ATP6V0CP27449 155 aa11.15□□□□□ -0.62
HMGN1-209ENST00000463631 RPL36AP83881 106 aaKnown RBP11.15□□□□□ -0.62
HMGN1-209ENST00000463631 ENHOQ6UWT2 76 aa11.15□□□□□ -0.62
HMGN1-209ENST00000463631 RPL36ALQ969Q0 106 aaKnown RBP11.15□□□□□ -0.62
HMGN1-209ENST00000463631 ACTR3CQ9C0K3 210 aaPredicted RBP11.15□□□□□ -0.62
HMGN1-209ENST00000463631 TRBV6-8A0A0A6YYG3 113 aa11.14□□□□□ -0.63
HMGN1-209ENST00000463631 USP17L23D6RBM5 183 aa11.14□□□□□ -0.63
HMGN1-209ENST00000463631 CRPP02741 224 aa11.14□□□□□ -0.63
HMGN1-209ENST00000463631 MT1HL1P0DM35 61 aa11.14□□□□□ -0.63
HMGN1-209ENST00000463631 CRIP1P50238 77 aa11.14□□□□□ -0.63
HMGN1-209ENST00000463631 DGAT2L7PQ6IED9 249 aa11.14□□□□□ -0.63
HMGN1-209ENST00000463631 ZC2HC1AQ96GY0 325 aa11.14□□□□□ -0.63
HMGN1-209ENST00000463631 TNFSF18Q9UNG2 199 aa11.14□□□□□ -0.63
HMGN1-209ENST00000463631 PHLDA3Q9Y5J5 127 aa11.14□□□□□ -0.63
HMGN1-209ENST00000463631 M0R036 132 aa11.13□□□□□ -0.63
HMGN1-209ENST00000463631 PEX7O00628 323 aa11.13□□□□□ -0.63
HMGN1-209ENST00000463631 ZFP82Q8N141 532 aa11.13□□□□□ -0.63
HMGN1-209ENST00000463631 C9orf163Q8N9P6 203 aa11.13□□□□□ -0.63
HMGN1-209ENST00000463631 SH2D1AO60880 128 aa11.12□□□□□ -0.63
HMGN1-209ENST00000463631 IFNA7P01567 189 aa11.12□□□□□ -0.63
HMGN1-209ENST00000463631 PRSS1P07477 247 aa11.12□□□□□ -0.63
HMGN1-209ENST00000463631 TPT1P13693 172 aaKnown RBP11.12□□□□□ -0.63
HMGN1-209ENST00000463631 MIAQ16674 131 aa11.12□□□□□ -0.63
HMGN1-209ENST00000463631 LINC01559Q495D7 138 aa11.12□□□□□ -0.63
HMGN1-209ENST00000463631 MPV17L2Q567V2 206 aa11.12□□□□□ -0.63
HMGN1-209ENST00000463631 FAM162BQ5T6X4 162 aa11.12□□□□□ -0.63
HMGN1-209ENST00000463631 HIST1H2BAQ96A08 127 aa11.12□□□□□ -0.63
HMGN1-209ENST00000463631 AQP10Q96PS8 301 aa11.12□□□□□ -0.63
HMGN1-209ENST00000463631 NKX6-2Q9C056 277 aaPredicted RBP11.12□□□□□ -0.63
HMGN1-209ENST00000463631 GRIFINA4D1Z8 144 aa11.11□□□□□ -0.63
HMGN1-209ENST00000463631 M0R381 172 aa11.11□□□□□ -0.63
HMGN1-209ENST00000463631 PKIAP61925 76 aa11.11□□□□□ -0.63
HMGN1-209ENST00000463631 C15orf54Q8N8G6 183 aa11.11□□□□□ -0.63
HMGN1-209ENST00000463631 ZFP30Q9Y2G7 519 aa11.11□□□□□ -0.63
HMGN1-209ENST00000463631 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.11□□□□□ -0.63
HMGN1-209ENST00000463631 TMEM262E9PQX1 116 aa11.1□□□□□ -0.63
HMGN1-209ENST00000463631 HLA-DQA1P01909 254 aa11.1□□□□□ -0.63
HMGN1-209ENST00000463631 ZNF674Q2M3X9 581 aa11.1□□□□□ -0.63
HMGN1-209ENST00000463631 ANGP03950 147 aaKnown RBP11.09□□□□□ -0.63
HMGN1-209ENST00000463631 RPL19P84098 196 aaKnown RBP11.09□□□□□ -0.63
HMGN1-209ENST00000463631 ZNF726P1Q15940 193 aa11.09□□□□□ -0.63
HMGN1-209ENST00000463631 PRR27Q6MZM9 219 aa11.09□□□□□ -0.63
HMGN1-209ENST00000463631 Q6ZRU5 148 aa11.09□□□□□ -0.63
HMGN1-209ENST00000463631 PRR34Q9NV39 138 aa11.09□□□□□ -0.63
HMGN1-209ENST00000463631 CTXND1A0A1B0GTU2 59 aa11.08□□□□□ -0.64
HMGN1-209ENST00000463631 FAM74A7A6NL05 159 aa11.08□□□□□ -0.64
HMGN1-209ENST00000463631 PTTG1O95997 202 aa11.08□□□□□ -0.64
HMGN1-209ENST00000463631 RAB4BP61018 213 aa11.08□□□□□ -0.64
HMGN1-209ENST00000463631 CIRBPQ14011 172 aaKnown RBP11.08□□□□□ -0.64
HMGN1-209ENST00000463631 NEXN-AS1Q8NBZ9 246 aa11.08□□□□□ -0.64
HMGN1-209ENST00000463631 FMC1Q96HJ9 113 aa11.08□□□□□ -0.64
HMGN1-209ENST00000463631 TRBV6-1A0A0K0K1D8 114 aa11.07□□□□□ -0.64
HMGN1-209ENST00000463631 PANO1I0J062 215 aa11.07□□□□□ -0.64
HMGN1-209ENST00000463631 DEFA1P59665 94 aa11.07□□□□□ -0.64
HMGN1-209ENST00000463631 DEFA3P59666 94 aa11.07□□□□□ -0.64
HMGN1-209ENST00000463631 UBE2G2P60604 165 aa11.07□□□□□ -0.64
HMGN1-209ENST00000463631 KRTAP26-1Q6PEX3 210 aa11.07□□□□□ -0.64
HMGN1-209ENST00000463631 SDIM1Q6ZPB5 146 aa11.07□□□□□ -0.64
HMGN1-209ENST00000463631 A0A0D9SG52 128 aa11.06□□□□□ -0.64
HMGN1-209ENST00000463631 LTAP01374 205 aa11.06□□□□□ -0.64
HMGN1-209ENST00000463631 TCEAL7Q9BRU2 100 aa11.06□□□□□ -0.64
HMGN1-209ENST00000463631 CHCHD5Q9BSY4 110 aa11.06□□□□□ -0.64
HMGN1-209ENST00000463631 VAX2Q9UIW0 290 aa11.06□□□□□ -0.64
HMGN1-209ENST00000463631 TMSB15BA0A087X1C1 80 aa11.05□□□□□ -0.64
HMGN1-209ENST00000463631 UBE2G1P62253 170 aa11.05□□□□□ -0.64
HMGN1-209ENST00000463631 CNBPP62633 177 aaKnown RBP11.05□□□□□ -0.64
HMGN1-209ENST00000463631 ZNF56Q15929 161 aa11.05□□□□□ -0.64
HMGN1-209ENST00000463631 TMEM97Q5BJF2 176 aa11.05□□□□□ -0.64
HMGN1-209ENST00000463631 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.05□□□□□ -0.64
HMGN1-209ENST00000463631 CLRN3Q8NCR9 226 aa11.04□□□□□ -0.64
HMGN1-209ENST00000463631 CXCL1P09341 107 aa11.03□□□□□ -0.64
HMGN1-209ENST00000463631 NTM-AS1Q6ZSK4 140 aa11.03□□□□□ -0.64
HMGN1-209ENST00000463631 LRP2P98164 4655 aa11.03□□□□□ -0.64
HMGN1-209ENST00000463631 TNXBP22105 4242 aa11.03□□□□□ -0.64
HMGN1-209ENST00000463631 FHITP49789 147 aa11.02□□□□□ -0.65
HMGN1-209ENST00000463631 RBX1P62877 108 aa11.02□□□□□ -0.65
HMGN1-209ENST00000463631 RPL7L1Q6DKI1 246 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms