RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 FGF6P10767 208 aa7.37□□□□□ -1.23
PTPRD-207ENST00000463477 G0S2P27469 103 aa7.37□□□□□ -1.23
PTPRD-207ENST00000463477 TFPI2P48307 235 aa7.37□□□□□ -1.23
PTPRD-207ENST00000463477 FHL3Q13643 280 aa7.37□□□□□ -1.23
PTPRD-207ENST00000463477 LAGE3Q14657 143 aa7.37□□□□□ -1.23
PTPRD-207ENST00000463477 BEAN1Q3B7T3 259 aa7.37□□□□□ -1.23
PTPRD-207ENST00000463477 DUX3Q96PT4 197 aa7.37□□□□□ -1.23
PTPRD-207ENST00000463477 MCRIP2Q9BUT9 160 aaKnown RBP7.37□□□□□ -1.23
PTPRD-207ENST00000463477 DPH3P1Q9H4G8 78 aa7.37□□□□□ -1.23
PTPRD-207ENST00000463477 GATA1P15976 413 aaPredicted RBP7.36□□□□□ -1.23
PTPRD-207ENST00000463477 RPL11P62913 178 aaKnown RBP7.36□□□□□ -1.23
PTPRD-207ENST00000463477 DEFB136Q30KP8 78 aa7.36□□□□□ -1.23
PTPRD-207ENST00000463477 ANXA2RQ3ZCQ2 193 aa7.36□□□□□ -1.23
PTPRD-207ENST00000463477 BVES-AS1Q5T3Y7 98 aa7.36□□□□□ -1.23
PTPRD-207ENST00000463477 Q6ZQT7 251 aa7.36□□□□□ -1.23
PTPRD-207ENST00000463477 C2orf91Q6ZV80 131 aa7.36□□□□□ -1.23
PTPRD-207ENST00000463477 BOD1L2Q8IYS8 172 aa7.36□□□□□ -1.23
PTPRD-207ENST00000463477 OR9G4Q8NGQ1 327 aa7.36□□□□□ -1.23
PTPRD-207ENST00000463477 COX11Q9Y6N1 276 aa7.36□□□□□ -1.23
PTPRD-207ENST00000463477 MUC4Q99102 2169 aa7.36□□□□□ -1.23
PTPRD-207ENST00000463477 LGALS1P09382 135 aaKnown RBP7.35□□□□□ -1.23
PTPRD-207ENST00000463477 HLA-DRB4P13762 266 aa7.35□□□□□ -1.23
PTPRD-207ENST00000463477 S100A4P26447 101 aaKnown RBP7.35□□□□□ -1.23
PTPRD-207ENST00000463477 RPL32P62910 135 aaKnown RBP7.35□□□□□ -1.23
PTPRD-207ENST00000463477 ODF1Q14990 250 aa7.35□□□□□ -1.23
PTPRD-207ENST00000463477 ANKRD39Q53RE8 183 aa7.35□□□□□ -1.23
PTPRD-207ENST00000463477 MPV17L2Q567V2 206 aa7.35□□□□□ -1.23
PTPRD-207ENST00000463477 SMIM2Q9BVW6 85 aa7.35□□□□□ -1.23
PTPRD-207ENST00000463477 PHLDA3Q9Y5J5 127 aa7.35□□□□□ -1.23
PTPRD-207ENST00000463477 HLA-DRB4X5D2U9 266 aa7.35□□□□□ -1.23
PTPRD-207ENST00000463477 WIPF1O43516 503 aa7.35□□□□□ -1.23
PTPRD-207ENST00000463477 NUDT3O95989 172 aa7.35□□□□□ -1.23
PTPRD-207ENST00000463477 RNASE3P12724 160 aaKnown RBP7.35□□□□□ -1.23
PTPRD-207ENST00000463477 RNASE4P34096 147 aaKnown RBP7.35□□□□□ -1.23
PTPRD-207ENST00000463477 AP1S3Q96PC3 154 aa7.35□□□□□ -1.23
PTPRD-207ENST00000463477 F6UB75 175 aa7.34□□□□□ -1.23
PTPRD-207ENST00000463477 LINC01619G3V211 115 aa7.34□□□□□ -1.23
PTPRD-207ENST00000463477 K7EQG2 157 aa7.34□□□□□ -1.23
PTPRD-207ENST00000463477 SMIM17P0DL12 118 aa7.34□□□□□ -1.23
PTPRD-207ENST00000463477 FXYD7P58549 80 aa7.34□□□□□ -1.23
PTPRD-207ENST00000463477 SEC11AP67812 179 aa7.34□□□□□ -1.23
PTPRD-207ENST00000463477 ZNF124Q15973 351 aa7.34□□□□□ -1.23
PTPRD-207ENST00000463477 ORMDL2Q53FV1 153 aa7.34□□□□□ -1.23
PTPRD-207ENST00000463477 DNAH3Q8TD57 4116 aa7.33□□□□□ -1.24
PTPRD-207ENST00000463477 IGHV4OR15-8A0A075B7B6 117 aa7.33□□□□□ -1.24
PTPRD-207ENST00000463477 A0A087WW49 117 aa7.33□□□□□ -1.24
PTPRD-207ENST00000463477 TRAV12-1A0A0B4J245 112 aa7.33□□□□□ -1.24
PTPRD-207ENST00000463477 A0A0J9YX75 114 aa7.33□□□□□ -1.24
PTPRD-207ENST00000463477 LINC01549A6NIU2 74 aa7.33□□□□□ -1.24
PTPRD-207ENST00000463477 NPSP0C0P6 89 aa7.33□□□□□ -1.24
PTPRD-207ENST00000463477 SUMO2P61956 95 aaKnown RBP7.33□□□□□ -1.24
PTPRD-207ENST00000463477 SNRPD3P62318 126 aaKnown RBP7.33□□□□□ -1.24
PTPRD-207ENST00000463477 EGFEM1PQ0D2K5 195 aa7.33□□□□□ -1.24
PTPRD-207ENST00000463477 RASL10AQ92737 203 aa7.33□□□□□ -1.24
PTPRD-207ENST00000463477 TRAV26-2A0A0B4J265 109 aa7.32□□□□□ -1.24
PTPRD-207ENST00000463477 C7orf71A4D174 169 aa7.32□□□□□ -1.24
PTPRD-207ENST00000463477 DPM2O94777 84 aa7.32□□□□□ -1.24
PTPRD-207ENST00000463477 DUSP14O95147 198 aaKnown RBP7.32□□□□□ -1.24
PTPRD-207ENST00000463477 IGKCP01834 107 aa7.32□□□□□ -1.24
PTPRD-207ENST00000463477 INSL3P51460 131 aa7.32□□□□□ -1.24
PTPRD-207ENST00000463477 DEFB1P60022 68 aa7.32□□□□□ -1.24
PTPRD-207ENST00000463477 FAM159AQ6UWV7 190 aa7.32□□□□□ -1.24
PTPRD-207ENST00000463477 DLX4Q92988 240 aaPredicted RBP7.32□□□□□ -1.24
PTPRD-207ENST00000463477 HIGD1BQ9P298 99 aa7.32□□□□□ -1.24
PTPRD-207ENST00000463477 DKK2Q9UBU2 259 aa7.32□□□□□ -1.24
PTPRD-207ENST00000463477 TP73-AS1Q9UF72 201 aa7.32□□□□□ -1.24
PTPRD-207ENST00000463477 HHLA3Q9XRX5 114 aa7.32□□□□□ -1.24
PTPRD-207ENST00000463477 KIF25-AS1Q9Y6Z4 181 aa7.32□□□□□ -1.24
PTPRD-207ENST00000463477 TAX1BP3O14907 124 aa7.32□□□□□ -1.24
PTPRD-207ENST00000463477 PRSS1P07477 247 aa7.32□□□□□ -1.24
PTPRD-207ENST00000463477 HSD52Q0P140 79 aa7.32□□□□□ -1.24
PTPRD-207ENST00000463477 TMEM97Q5BJF2 176 aa7.32□□□□□ -1.24
PTPRD-207ENST00000463477 C9orf66Q5T8R8 295 aa7.32□□□□□ -1.24
PTPRD-207ENST00000463477 TOMM6Q96B49 74 aa7.32□□□□□ -1.24
PTPRD-207ENST00000463477 C18orf15Q96N68 181 aa7.32□□□□□ -1.24
PTPRD-207ENST00000463477 PRKDCP78527 4128 aaKnown RBP7.31□□□□□ -1.24
PTPRD-207ENST00000463477 IGKV3-7A0A075B6H7 116 aa7.31□□□□□ -1.24
PTPRD-207ENST00000463477 A0A087WX48 190 aa7.31□□□□□ -1.24
PTPRD-207ENST00000463477 TRAV2A0A0B4J234 112 aa7.31□□□□□ -1.24
PTPRD-207ENST00000463477 J3KRW8 73 aa7.31□□□□□ -1.24
PTPRD-207ENST00000463477 GNRH2O43555 120 aa7.31□□□□□ -1.24
PTPRD-207ENST00000463477 EDN2P20800 178 aa7.31□□□□□ -1.24
PTPRD-207ENST00000463477 SLURP1P55000 103 aa7.31□□□□□ -1.24
PTPRD-207ENST00000463477 LINC00315P59091 139 aa7.31□□□□□ -1.24
PTPRD-207ENST00000463477 UBE2V1Q13404 147 aa7.31□□□□□ -1.24
PTPRD-207ENST00000463477 C14orf178Q8N769 122 aaPredicted RBP7.31□□□□□ -1.24
PTPRD-207ENST00000463477 C9orf85Q96MD7 179 aa7.31□□□□□ -1.24
PTPRD-207ENST00000463477 A8MTW9 85 aa7.3□□□□□ -1.24
PTPRD-207ENST00000463477 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.3□□□□□ -1.24
PTPRD-207ENST00000463477 PLNP26678 52 aa7.3□□□□□ -1.24
PTPRD-207ENST00000463477 HOXD3P31249 432 aaPredicted RBP7.3□□□□□ -1.24
PTPRD-207ENST00000463477 KRTAP10-11P60412 298 aa7.3□□□□□ -1.24
PTPRD-207ENST00000463477 FOXI2Q6ZQN5 318 aa7.3□□□□□ -1.24
PTPRD-207ENST00000463477 PRB2P02812 416 aaPredicted RBP7.29□□□□□ -1.24
PTPRD-207ENST00000463477 ZNF688P0C7X2 276 aa7.29□□□□□ -1.24
PTPRD-207ENST00000463477 CDKN1BP46527 198 aa7.29□□□□□ -1.24
PTPRD-207ENST00000463477 ADAMTSL5Q6ZMM2 481 aa7.29□□□□□ -1.24
PTPRD-207ENST00000463477 WFDC3Q8IUB2 231 aa7.29□□□□□ -1.24
PTPRD-207ENST00000463477 SORL1Q92673 2214 aa7.29□□□□□ -1.24
PTPRD-207ENST00000463477 IGHV3-16A0A0C4DH30 117 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms