RNA–Protein interactions for RNA: ENST00000462996.1

PTPN18-208, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-208ENST00000462996 TRBV7-3A0A075B6L6 115 aa12.7□□□□□ -0.38
PTPN18-208ENST00000462996 A0A0J9YXV3 536 aa12.7□□□□□ -0.38
PTPN18-208ENST00000462996 TRBV10-1A0A0K0K1A3 114 aa12.7□□□□□ -0.38
PTPN18-208ENST00000462996 A0A1W2PPV4 95 aa12.7□□□□□ -0.38
PTPN18-208ENST00000462996 H3BVH4 76 aa12.7□□□□□ -0.38
PTPN18-208ENST00000462996 H2AFB2P0C5Z0 115 aa12.7□□□□□ -0.38
PTPN18-208ENST00000462996 CNBPP62633 177 aaKnown RBP12.7□□□□□ -0.38
PTPN18-208ENST00000462996 RPL36AP83881 106 aaKnown RBP12.7□□□□□ -0.38
PTPN18-208ENST00000462996 RPL36ALQ969Q0 106 aaKnown RBP12.7□□□□□ -0.38
PTPN18-208ENST00000462996 RNF185Q96GF1 192 aa12.7□□□□□ -0.38
PTPN18-208ENST00000462996 K7EQM0 130 aa12.69□□□□□ -0.38
PTPN18-208ENST00000462996 RAB2AP61019 212 aa12.69□□□□□ -0.38
PTPN18-208ENST00000462996 SCGB1C1Q8TD33 95 aa12.69□□□□□ -0.38
PTPN18-208ENST00000462996 SPACA4Q8TDM5 124 aa12.69□□□□□ -0.38
PTPN18-208ENST00000462996 SFRP2Q96HF1 295 aa12.69□□□□□ -0.38
PTPN18-208ENST00000462996 KIF25-AS1Q9Y6Z4 181 aa12.69□□□□□ -0.38
PTPN18-208ENST00000462996 ARMS2P0C7Q2 107 aa12.68□□□□□ -0.38
PTPN18-208ENST00000462996 ARL14EPLP0DKL9 152 aa12.68□□□□□ -0.38
PTPN18-208ENST00000462996 CLPSL2Q6UWE3 100 aa12.68□□□□□ -0.38
PTPN18-208ENST00000462996 CLRN3Q8NCR9 226 aa12.68□□□□□ -0.38
PTPN18-208ENST00000462996 PRR34Q9NV39 138 aa12.68□□□□□ -0.38
PTPN18-208ENST00000462996 PLAC8Q9NZF1 115 aa12.68□□□□□ -0.38
PTPN18-208ENST00000462996 SLPIP03973 132 aa12.67□□□□□ -0.38
PTPN18-208ENST00000462996 SAPCD1Q5SSQ6 148 aa12.67□□□□□ -0.38
PTPN18-208ENST00000462996 OR11H4Q8NGC9 324 aa12.67□□□□□ -0.38
PTPN18-208ENST00000462996 SMIM3Q9BZL3 60 aa12.67□□□□□ -0.38
PTPN18-208ENST00000462996 EPDR1Q9UM22 224 aa12.67□□□□□ -0.38
PTPN18-208ENST00000462996 HSPB11Q9Y547 144 aa12.67□□□□□ -0.38
PTPN18-208ENST00000462996 IGHV3-64A0A075B6Q5 118 aa12.66□□□□□ -0.38
PTPN18-208ENST00000462996 FABP5P3A8MUU1 101 aa12.66□□□□□ -0.38
PTPN18-208ENST00000462996 B4DEV8 164 aa12.66□□□□□ -0.38
PTPN18-208ENST00000462996 SUMO1P63165 101 aaKnown RBP12.66□□□□□ -0.38
PTPN18-208ENST00000462996 DNLZQ5SXM8 178 aa12.66□□□□□ -0.38
PTPN18-208ENST00000462996 WDR73Q6P4I2 378 aa12.66□□□□□ -0.38
PTPN18-208ENST00000462996 OR10G8Q8NGN5 311 aa12.66□□□□□ -0.38
PTPN18-208ENST00000462996 KRTAP9-2Q9BYQ4 174 aa12.66□□□□□ -0.38
PTPN18-208ENST00000462996 RBM38Q9H0Z9 239 aaKnown RBP12.66□□□□□ -0.38
PTPN18-208ENST00000462996 PTTG1O95997 202 aa12.65□□□□□ -0.38
PTPN18-208ENST00000462996 LINC00269Q8N2A0 174 aa12.65□□□□□ -0.38
PTPN18-208ENST00000462996 SUN5Q8TC36 379 aa12.65□□□□□ -0.38
PTPN18-208ENST00000462996 C7orf33Q8WU49 177 aa12.65□□□□□ -0.38
PTPN18-208ENST00000462996 CHCHD5Q9BSY4 110 aa12.65□□□□□ -0.38
PTPN18-208ENST00000462996 hDV102S1A0JD36 115 aa12.64□□□□□ -0.39
PTPN18-208ENST00000462996 GRIFINA4D1Z8 144 aa12.64□□□□□ -0.39
PTPN18-208ENST00000462996 KRBOX1C9JBD0 128 aa12.64□□□□□ -0.39
PTPN18-208ENST00000462996 PRR3P79522 188 aaKnown RBP12.64□□□□□ -0.39
PTPN18-208ENST00000462996 WFDC1Q9HC57 220 aa12.64□□□□□ -0.39
PTPN18-208ENST00000462996 TRAV34A0A0B4J273 112 aa12.63□□□□□ -0.39
PTPN18-208ENST00000462996 CRIP1P50238 77 aa12.63□□□□□ -0.39
PTPN18-208ENST00000462996 NEXN-AS1Q8NBZ9 246 aa12.63□□□□□ -0.39
PTPN18-208ENST00000462996 ARL2-SNX15V9GYD0 113 aa12.63□□□□□ -0.39
PTPN18-208ENST00000462996 M0R381 172 aa12.62□□□□□ -0.39
PTPN18-208ENST00000462996 STAG3L2P0CL84 134 aa12.62□□□□□ -0.39
PTPN18-208ENST00000462996 STAG3L3P0CL85 134 aa12.62□□□□□ -0.39
PTPN18-208ENST00000462996 GCHFRP30047 84 aa12.62□□□□□ -0.39
PTPN18-208ENST00000462996 RBX1P62877 108 aa12.62□□□□□ -0.39
PTPN18-208ENST00000462996 NTM-AS1Q6ZSK4 140 aa12.62□□□□□ -0.39
PTPN18-208ENST00000462996 PHLDA3Q9Y5J5 127 aa12.62□□□□□ -0.39
PTPN18-208ENST00000462996 IGLV10-54A0A075B6I4 117 aa12.61□□□□□ -0.39
PTPN18-208ENST00000462996 M0R036 132 aa12.61□□□□□ -0.39
PTPN18-208ENST00000462996 PKIAP61925 76 aa12.61□□□□□ -0.39
PTPN18-208ENST00000462996 GTSF1Q8WW33 167 aa12.61□□□□□ -0.39
PTPN18-208ENST00000462996 CDC34P49427 236 aaPredicted RBP12.6□□□□□ -0.39
PTPN18-208ENST00000462996 PPP1R1CQ8WVI7 109 aa12.6□□□□□ -0.39
PTPN18-208ENST00000462996 MUC2Q02817 5179 aa12.59□□□□□ -0.39
PTPN18-208ENST00000462996 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.59□□□□□ -0.39
PTPN18-208ENST00000462996 GAGE6Q13070 117 aa12.59□□□□□ -0.39
PTPN18-208ENST00000462996 RAB24Q969Q5 203 aa12.59□□□□□ -0.39
PTPN18-208ENST00000462996 FAM240BA0A1B0GVZ2 78 aa12.58□□□□□ -0.4
PTPN18-208ENST00000462996 TPT1P13693 172 aaKnown RBP12.58□□□□□ -0.4
PTPN18-208ENST00000462996 RPL12P30050 165 aaKnown RBP12.58□□□□□ -0.4
PTPN18-208ENST00000462996 CYCSP99999 105 aaKnown RBP12.58□□□□□ -0.4
PTPN18-208ENST00000462996 PRR27Q6MZM9 219 aa12.58□□□□□ -0.4
PTPN18-208ENST00000462996 AP5S1Q9NUS5 200 aa12.58□□□□□ -0.4
PTPN18-208ENST00000462996 MUC21A0A0G2JKD1 596 aa12.57□□□□□ -0.4
PTPN18-208ENST00000462996 H2BFSP57053 126 aa12.57□□□□□ -0.4
PTPN18-208ENST00000462996 RAB4BP61018 213 aa12.57□□□□□ -0.4
PTPN18-208ENST00000462996 SPINK6Q6UWN8 80 aa12.57□□□□□ -0.4
PTPN18-208ENST00000462996 ZFP82Q8N141 532 aa12.57□□□□□ -0.4
PTPN18-208ENST00000462996 SH2D1AO60880 128 aa12.56□□□□□ -0.4
PTPN18-208ENST00000462996 COX6A2Q02221 97 aa12.56□□□□□ -0.4
PTPN18-208ENST00000462996 REG3AQ06141 175 aa12.56□□□□□ -0.4
PTPN18-208ENST00000462996 REG3GQ6UW15 175 aa12.56□□□□□ -0.4
PTPN18-208ENST00000462996 TMSB15BA0A087X1C1 80 aa12.55□□□□□ -0.4
PTPN18-208ENST00000462996 MPC2O95563 127 aa12.55□□□□□ -0.4
PTPN18-208ENST00000462996 Q86TA4 180 aa12.55□□□□□ -0.4
PTPN18-208ENST00000462996 ZNF56Q15929 161 aa12.54□□□□□ -0.4
PTPN18-208ENST00000462996 MAJINQ3KP22 176 aa12.54□□□□□ -0.4
PTPN18-208ENST00000462996 LYPD6BQ8NI32 183 aa12.54□□□□□ -0.4
PTPN18-208ENST00000462996 TMEM167BQ9NRX6 74 aa12.54□□□□□ -0.4
PTPN18-208ENST00000462996 VAX2Q9UIW0 290 aa12.54□□□□□ -0.4
PTPN18-208ENST00000462996 RAB5CP51148 216 aa12.53□□□□□ -0.4
PTPN18-208ENST00000462996 SRSF9Q13242 221 aaKnown RBP eCLIP12.53□□□□□ -0.4
PTPN18-208ENST00000462996 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.53□□□□□ -0.4
PTPN18-208ENST00000462996 PRSS3P2Q8NHM4 247 aa12.53□□□□□ -0.4
PTPN18-208ENST00000462996 DERL1Q9BUN8 251 aa12.53□□□□□ -0.4
PTPN18-208ENST00000462996 TRBV6-1A0A0K0K1D8 114 aa12.52□□□□□ -0.41
PTPN18-208ENST00000462996 LINC01559Q495D7 138 aa12.52□□□□□ -0.41
PTPN18-208ENST00000462996 TMEM97Q5BJF2 176 aa12.52□□□□□ -0.41
PTPN18-208ENST00000462996 FAM162BQ5T6X4 162 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms