RNA–Protein interactions for RNA: ENST00000462429.1

VPS41-210, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 3

Gene VPS41, Length 347 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-210ENST00000462429 P0C880 135 aa2.02□□□□□ -2.09
VPS41-210ENST00000462429 UBE2G1P62253 170 aa2.02□□□□□ -2.09
VPS41-210ENST00000462429 ARF6P62330 175 aa2.02□□□□□ -2.09
VPS41-210ENST00000462429 HES1Q14469 280 aa2.02□□□□□ -2.09
VPS41-210ENST00000462429 ADIRFQ15847 76 aa2.02□□□□□ -2.09
VPS41-210ENST00000462429 SPRNQ5BIV9 151 aa2.02□□□□□ -2.09
VPS41-210ENST00000462429 C10orf113Q5VZT2 155 aa2.02□□□□□ -2.09
VPS41-210ENST00000462429 SCXQ7RTU7 201 aa2.02□□□□□ -2.09
VPS41-210ENST00000462429 TMEM75Q8N9X5 138 aa2.02□□□□□ -2.09
VPS41-210ENST00000462429 CMTM2Q8TAZ6 248 aa2.02□□□□□ -2.09
VPS41-210ENST00000462429 LEAP2Q969E1 77 aa2.02□□□□□ -2.09
VPS41-210ENST00000462429 ACY3Q96HD9 319 aa2.02□□□□□ -2.09
VPS41-210ENST00000462429 TRGV9Q99603 122 aa2.02□□□□□ -2.09
VPS41-210ENST00000462429 CCL19Q99731 98 aa2.02□□□□□ -2.09
VPS41-210ENST00000462429 NABP2Q9BQ15 211 aa2.02□□□□□ -2.09
VPS41-210ENST00000462429 METTL1Q9UBP6 276 aaKnown RBP2.02□□□□□ -2.09
VPS41-210ENST00000462429 FUT9Q9Y231 359 aa2.02□□□□□ -2.09
VPS41-210ENST00000462429 LINC00588Q9Y4M8 146 aa2.02□□□□□ -2.09
VPS41-210ENST00000462429 WDFY4Q6ZS81 3184 aa2.02□□□□□ -2.09
VPS41-210ENST00000462429 FRYLO94915 3013 aa2.02□□□□□ -2.09
VPS41-210ENST00000462429 WDFY3Q8IZQ1 3526 aa2.02□□□□□ -2.09
VPS41-210ENST00000462429 PLCE1Q9P212 2302 aa2.02□□□□□ -2.09
VPS41-210ENST00000462429 DIDO1Q9BTC0 2240 aaKnown RBP2.02□□□□□ -2.09
VPS41-210ENST00000462429 DSCAML1Q8TD84 2053 aa2.02□□□□□ -2.09
VPS41-210ENST00000462429 PCNX1Q96RV3 2341 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 PTPRQQ9UMZ3 2332 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 TRAV3A0A0B4J244 114 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 C9JCJ5 164 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 GNG7O60262 68 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 TFF1P04155 84 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 CRYBA1P05813 215 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 OR5G3P0C626 314 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 ARL14EPLP0DKL9 152 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 ZNF22P17026 224 aaPredicted RBP2.01□□□□□ -2.09
VPS41-210ENST00000462429 ADCYAP1P18509 176 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 GCHFRP30047 84 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 OR10J1P30954 320 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 CSN1S1P47710 185 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 REG1BP48304 166 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 GNG4P50150 75 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 CCL20P78556 96 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 TFF3Q07654 80 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 PDE6HQ13956 83 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 FXYD3Q14802 87 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 SPINK9Q5DT21 86 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 MIC13Q5XKP0 118 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 RASL11AQ6T310 242 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 LINC00305Q7Z4B0 112 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 VMO1Q7Z5L0 202 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 BPIFA4PQ86YQ2 179 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 C3orf22Q8N5N4 141 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 FAM24BQ8N5W8 94 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 OR4X1Q8NH49 305 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 Q8WTZ3 238 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 SFRP2Q96HF1 295 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 MGST2Q99735 147 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 GTSF1LQ9H1H1 148 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 HIGD1AQ9Y241 93 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 SPTA1P02549 2419 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 ZNF292O60281 2723 aa2.01□□□□□ -2.09
VPS41-210ENST00000462429 ARFGEF3Q5TH69 2177 aa2□□□□□ -2.09
VPS41-210ENST00000462429 TRBV7-1A0A0A6YYK4 115 aa2□□□□□ -2.09
VPS41-210ENST00000462429 LOC105371267A0A1B0GV96 52 aa2□□□□□ -2.09
VPS41-210ENST00000462429 TINCRA0A1B0GVN0 87 aa2□□□□□ -2.09
VPS41-210ENST00000462429 B4DSR2 109 aa2□□□□□ -2.09
VPS41-210ENST00000462429 F5H768 121 aa2□□□□□ -2.09
VPS41-210ENST00000462429 LY6LH3BQJ8 138 aa2□□□□□ -2.09
VPS41-210ENST00000462429 SLC25A20O43772 301 aa2□□□□□ -2.09
VPS41-210ENST00000462429 NDUFA3O95167 84 aa2□□□□□ -2.09
VPS41-210ENST00000462429 HLA-DRB1P01911 266 aa2□□□□□ -2.09
VPS41-210ENST00000462429 MT-ND6P03923 174 aa2□□□□□ -2.09
VPS41-210ENST00000462429 NBEAP1P0C6P0 100 aa2□□□□□ -2.09
VPS41-210ENST00000462429 HIST1H1EP10412 219 aaKnown RBP2□□□□□ -2.09
VPS41-210ENST00000462429 COX6B1P14854 86 aa2□□□□□ -2.09
VPS41-210ENST00000462429 SLC25A16P16260 332 aa2□□□□□ -2.09
VPS41-210ENST00000462429 RPL7P18124 248 aaKnown RBP2□□□□□ -2.09
VPS41-210ENST00000462429 AKR1C3P42330 323 aa2□□□□□ -2.09
VPS41-210ENST00000462429 AKR1D1P51857 326 aa2□□□□□ -2.09
VPS41-210ENST00000462429 YPEL3P61236 119 aaPredicted RBP2□□□□□ -2.09
VPS41-210ENST00000462429 UBE2L3P68036 154 aaKnown RBP2□□□□□ -2.09
VPS41-210ENST00000462429 S100A12P80511 92 aa2□□□□□ -2.09
VPS41-210ENST00000462429 PSG9Q00887 426 aa2□□□□□ -2.09
VPS41-210ENST00000462429 ZNF90Q03938 601 aa2□□□□□ -2.09
VPS41-210ENST00000462429 WT1-ASQ06250 92 aa2□□□□□ -2.09
VPS41-210ENST00000462429 ELOBQ15370 118 aa2□□□□□ -2.09
VPS41-210ENST00000462429 SAMD13Q5VXD3 122 aa2□□□□□ -2.09
VPS41-210ENST00000462429 TTC9CQ8N5M4 171 aa2□□□□□ -2.09
VPS41-210ENST00000462429 C5orf17Q8NAS9 161 aa2□□□□□ -2.09
VPS41-210ENST00000462429 BORCS7Q96B45 105 aa2□□□□□ -2.09
VPS41-210ENST00000462429 OSTCQ9NRP0 149 aa2□□□□□ -2.09
VPS41-210ENST00000462429 TMEM14CQ9P0S9 112 aa2□□□□□ -2.09
VPS41-210ENST00000462429 LINC00527Q9UJ94 153 aa2□□□□□ -2.09
VPS41-210ENST00000462429 HILPDAQ9Y5L2 63 aa2□□□□□ -2.09
VPS41-210ENST00000462429 MALRD1Q5VYJ5 2156 aa1.99□□□□□ -2.09
VPS41-210ENST00000462429 FREM2Q5SZK8 3169 aa1.99□□□□□ -2.09
VPS41-210ENST00000462429 IGLC7A0M8Q6 106 aa1.99□□□□□ -2.09
VPS41-210ENST00000462429 FAM223BA6NKX1 122 aa1.99□□□□□ -2.09
VPS41-210ENST00000462429 ODF3BA8MYP8 253 aa1.99□□□□□ -2.09
VPS41-210ENST00000462429 LYNX1G3V0Z9 82 aa1.99□□□□□ -2.09
VPS41-210ENST00000462429 H3BUA1 57 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms