RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 CHTF8P0CG12 524 aa2.9□□□□□ -1.95
COPS3-204ENST00000462236 RNASE4P34096 147 aaKnown RBP2.9□□□□□ -1.95
COPS3-204ENST00000462236 AKR1C1Q04828 323 aa2.9□□□□□ -1.95
COPS3-204ENST00000462236 SSBP1Q04837 148 aaKnown RBP2.9□□□□□ -1.95
COPS3-204ENST00000462236 Q6AWC8 147 aa2.9□□□□□ -1.95
COPS3-204ENST00000462236 LINC00305Q7Z4B0 112 aa2.9□□□□□ -1.95
COPS3-204ENST00000462236 SLC25A29Q8N8R3 303 aa2.9□□□□□ -1.95
COPS3-204ENST00000462236 CIB3Q96Q77 187 aaPredicted RBP2.9□□□□□ -1.95
COPS3-204ENST00000462236 ARL6Q9H0F7 186 aa2.9□□□□□ -1.95
COPS3-204ENST00000462236 ZNF492Q9P255 531 aa2.9□□□□□ -1.95
COPS3-204ENST00000462236 CRCT1Q9UGL9 99 aa2.9□□□□□ -1.95
COPS3-204ENST00000462236 TRBV19A0A075B6N1 114 aa2.89□□□□□ -1.95
COPS3-204ENST00000462236 A0A0U1RQV1 116 aa2.89□□□□□ -1.95
COPS3-204ENST00000462236 SMIM31A0A1B0GVY4 71 aa2.89□□□□□ -1.95
COPS3-204ENST00000462236 GGTLC3B5MD39 225 aa2.89□□□□□ -1.95
COPS3-204ENST00000462236 M0R2P5 195 aa2.89□□□□□ -1.95
COPS3-204ENST00000462236 MED6O75586 246 aa2.89□□□□□ -1.95
COPS3-204ENST00000462236 GPX1P07203 203 aa2.89□□□□□ -1.95
COPS3-204ENST00000462236 POLR2GP62487 172 aaKnown RBP eCLIP2.89□□□□□ -1.95
COPS3-204ENST00000462236 PDE6HQ13956 83 aa2.89□□□□□ -1.95
COPS3-204ENST00000462236 ZNF266Q14584 549 aa2.89□□□□□ -1.95
COPS3-204ENST00000462236 GUK1Q16774 197 aa2.89□□□□□ -1.95
COPS3-204ENST00000462236 SCGB2B2Q4G0G5 96 aa2.89□□□□□ -1.95
COPS3-204ENST00000462236 TMEM14EPQ6UXP3 125 aa2.89□□□□□ -1.95
COPS3-204ENST00000462236 Q6ZN92 141 aa2.89□□□□□ -1.95
COPS3-204ENST00000462236 S100A7AQ86SG5 101 aa2.89□□□□□ -1.95
COPS3-204ENST00000462236 ZNF546Q86UE3 836 aa2.89□□□□□ -1.95
COPS3-204ENST00000462236 HSD17B11Q8NBQ5 300 aa2.89□□□□□ -1.95
COPS3-204ENST00000462236 OR4C5Q8NGB2 326 aa2.89□□□□□ -1.95
COPS3-204ENST00000462236 RMI2Q96E14 147 aa2.89□□□□□ -1.95
COPS3-204ENST00000462236 CNBD2Q96M20 576 aa2.89□□□□□ -1.95
COPS3-204ENST00000462236 PRELID1Q9Y255 219 aa2.89□□□□□ -1.95
COPS3-204ENST00000462236 KCNIP3Q9Y2W7 256 aa2.89□□□□□ -1.95
COPS3-204ENST00000462236 ANKRD65E5RJM6 399 aa2.88□□□□□ -1.95
COPS3-204ENST00000462236 WRBO00258 174 aa2.88□□□□□ -1.95
COPS3-204ENST00000462236 HPGDSO60760 199 aa2.88□□□□□ -1.95
COPS3-204ENST00000462236 UBE2MP61081 183 aaKnown RBP2.88□□□□□ -1.95
COPS3-204ENST00000462236 RHOHQ15669 191 aa2.88□□□□□ -1.95
COPS3-204ENST00000462236 SPANXN5Q5MJ07 72 aa2.88□□□□□ -1.95
COPS3-204ENST00000462236 KRTAP26-1Q6PEX3 210 aa2.88□□□□□ -1.95
COPS3-204ENST00000462236 DPPA3Q6W0C5 159 aa2.88□□□□□ -1.95
COPS3-204ENST00000462236 CAMK2N1Q7Z7J9 78 aa2.88□□□□□ -1.95
COPS3-204ENST00000462236 NIT1Q86X76 327 aa2.88□□□□□ -1.95
COPS3-204ENST00000462236 Q8N9L7 120 aa2.88□□□□□ -1.95
COPS3-204ENST00000462236 YIPF6Q96EC8 236 aa2.88□□□□□ -1.95
COPS3-204ENST00000462236 RNF185Q96GF1 192 aa2.88□□□□□ -1.95
COPS3-204ENST00000462236 SDHCQ99643 169 aaPredicted RBP2.88□□□□□ -1.95
COPS3-204ENST00000462236 SRRQ9GZT4 340 aa2.88□□□□□ -1.95
COPS3-204ENST00000462236 NPVFQ9HCQ7 196 aa2.88□□□□□ -1.95
COPS3-204ENST00000462236 PLAC8Q9NZF1 115 aa2.88□□□□□ -1.95
COPS3-204ENST00000462236 COMMD3Q9UBI1 195 aa2.88□□□□□ -1.95
COPS3-204ENST00000462236 IGKV2D-24A0A075B6R9 120 aa2.87□□□□□ -1.95
COPS3-204ENST00000462236 IGKV2-40A0A087WW87 121 aaPredicted RBP2.87□□□□□ -1.95
COPS3-204ENST00000462236 FABP12A6NFH5 140 aa2.87□□□□□ -1.95
COPS3-204ENST00000462236 H3BP45 60 aa2.87□□□□□ -1.95
COPS3-204ENST00000462236 IGKV2D-40P01614 121 aaPredicted RBP2.87□□□□□ -1.95
COPS3-204ENST00000462236 HIST1H1EP10412 219 aaKnown RBP2.87□□□□□ -1.95
COPS3-204ENST00000462236 PRR3P79522 188 aaKnown RBP2.87□□□□□ -1.95
COPS3-204ENST00000462236 RPL19P84098 196 aaKnown RBP2.87□□□□□ -1.95
COPS3-204ENST00000462236 SLC38A11Q08AI6 406 aa2.87□□□□□ -1.95
COPS3-204ENST00000462236 TMEM183BQ1AE95 376 aa2.87□□□□□ -1.95
COPS3-204ENST00000462236 CFAP126Q5VTH2 177 aa2.87□□□□□ -1.95
COPS3-204ENST00000462236 TMEM183AQ8IXX5 376 aa2.87□□□□□ -1.95
COPS3-204ENST00000462236 SPACA4Q8TDM5 124 aa2.87□□□□□ -1.95
COPS3-204ENST00000462236 SMIM4Q8WVI0 70 aa2.87□□□□□ -1.95
COPS3-204ENST00000462236 PTH2Q96A98 100 aa2.87□□□□□ -1.95
COPS3-204ENST00000462236 LINC00167Q96N53 147 aa2.87□□□□□ -1.95
COPS3-204ENST00000462236 MGST2Q99735 147 aa2.87□□□□□ -1.95
COPS3-204ENST00000462236 PRADC1Q9BSG0 188 aa2.87□□□□□ -1.95
COPS3-204ENST00000462236 CHCHD7Q9BUK0 85 aa2.87□□□□□ -1.95
COPS3-204ENST00000462236 TMEM14CQ9P0S9 112 aa2.87□□□□□ -1.95
COPS3-204ENST00000462236 PAIP2BQ9ULR5 123 aaKnown RBP2.87□□□□□ -1.95
COPS3-204ENST00000462236 RAB26Q9ULW5 256 aa2.87□□□□□ -1.95
COPS3-204ENST00000462236 LENEPQ9Y5L5 61 aa2.87□□□□□ -1.95
COPS3-204ENST00000462236 FSIP2Q5CZC0 6907 aa2.87□□□□□ -1.95
COPS3-204ENST00000462236 PIGBOS1A0A0B4J2F0 54 aa2.86□□□□□ -1.95
COPS3-204ENST00000462236 ANKRD20A5PA0PJZ0 165 aa2.86□□□□□ -1.95
COPS3-204ENST00000462236 SMCO3A2RU48 225 aa2.86□□□□□ -1.95
COPS3-204ENST00000462236 RBAKDNA6NC62 111 aa2.86□□□□□ -1.95
COPS3-204ENST00000462236 DISC1C4P0D8 188 aa2.86□□□□□ -1.95
COPS3-204ENST00000462236 GNRH2O43555 120 aa2.86□□□□□ -1.95
COPS3-204ENST00000462236 TYMSP04818 313 aa2.86□□□□□ -1.95
COPS3-204ENST00000462236 OR10J4P0C629 311 aa2.86□□□□□ -1.95
COPS3-204ENST00000462236 AKAIN1P0CW23 69 aa2.86□□□□□ -1.95
COPS3-204ENST00000462236 INPP1P49441 399 aa2.86□□□□□ -1.95
COPS3-204ENST00000462236 ZNF138P52744 262 aa2.86□□□□□ -1.95
COPS3-204ENST00000462236 CNBPP62633 177 aaKnown RBP2.86□□□□□ -1.95
COPS3-204ENST00000462236 C10orf113Q5VZT2 155 aa2.86□□□□□ -1.95
COPS3-204ENST00000462236 SPINK6Q6UWN8 80 aa2.86□□□□□ -1.95
COPS3-204ENST00000462236 ENHOQ6UWT2 76 aa2.86□□□□□ -1.95
COPS3-204ENST00000462236 IZUMO2Q6UXV1 221 aa2.86□□□□□ -1.95
COPS3-204ENST00000462236 EXOC3-AS1Q8N2X6 119 aa2.86□□□□□ -1.95
COPS3-204ENST00000462236 CYB561D1Q8N8Q1 229 aa2.86□□□□□ -1.95
COPS3-204ENST00000462236 SMIM8Q96KF7 97 aa2.86□□□□□ -1.95
COPS3-204ENST00000462236 C2orf50Q96LR7 162 aa2.86□□□□□ -1.95
COPS3-204ENST00000462236 PRRT1Q99946 306 aa2.86□□□□□ -1.95
COPS3-204ENST00000462236 MIXL1Q9H2W2 232 aa2.86□□□□□ -1.95
COPS3-204ENST00000462236 OR51M1Q9H341 326 aa2.86□□□□□ -1.95
COPS3-204ENST00000462236 VAX2Q9UIW0 290 aa2.86□□□□□ -1.95
COPS3-204ENST00000462236 KLK12Q9UKR0 248 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms