RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 C15orf54Q8N8G6 183 aa8.12□□□□□ -1.11
TRAF3IP1-204ENST00000462122 JPT2Q9H910 190 aa8.12□□□□□ -1.11
TRAF3IP1-204ENST00000462122 OSTCQ9NRP0 149 aa8.12□□□□□ -1.11
TRAF3IP1-204ENST00000462122 A0A096LPF7 62 aa8.11□□□□□ -1.11
TRAF3IP1-204ENST00000462122 IGHV3-73A0A0B4J1V6 119 aa8.11□□□□□ -1.11
TRAF3IP1-204ENST00000462122 CTRLP40313 264 aa8.11□□□□□ -1.11
TRAF3IP1-204ENST00000462122 CCL18P55774 89 aa8.11□□□□□ -1.11
TRAF3IP1-204ENST00000462122 FAM3BP58499 235 aaPredicted RBP8.11□□□□□ -1.11
TRAF3IP1-204ENST00000462122 MRPL23Q16540 153 aaKnown RBP8.11□□□□□ -1.11
TRAF3IP1-204ENST00000462122 UFSP1Q6NVU6 142 aa8.11□□□□□ -1.11
TRAF3IP1-204ENST00000462122 UBE2DNLQ8IWF7 75 aa8.11□□□□□ -1.11
TRAF3IP1-204ENST00000462122 ISOC2Q96AB3 205 aa8.11□□□□□ -1.11
TRAF3IP1-204ENST00000462122 AP1S3Q96PC3 154 aa8.11□□□□□ -1.11
TRAF3IP1-204ENST00000462122 PRADC1Q9BSG0 188 aa8.11□□□□□ -1.11
TRAF3IP1-204ENST00000462122 K7EQD1 137 aa8.1□□□□□ -1.11
TRAF3IP1-204ENST00000462122 CRYGDP07320 174 aa8.1□□□□□ -1.11
TRAF3IP1-204ENST00000462122 GYPEP15421 78 aa8.1□□□□□ -1.11
TRAF3IP1-204ENST00000462122 SRIP30626 198 aa8.1□□□□□ -1.11
TRAF3IP1-204ENST00000462122 LCE2AQ5TA79 106 aaPredicted RBP8.1□□□□□ -1.11
TRAF3IP1-204ENST00000462122 FAM74A4Q5TZK3 123 aa8.1□□□□□ -1.11
TRAF3IP1-204ENST00000462122 WDR73Q6P4I2 378 aa8.1□□□□□ -1.11
TRAF3IP1-204ENST00000462122 LYZL1Q6UWQ5 148 aa8.1□□□□□ -1.11
TRAF3IP1-204ENST00000462122 SH2D6Q7Z4S9 175 aa8.1□□□□□ -1.11
TRAF3IP1-204ENST00000462122 SLC25A29Q8N8R3 303 aa8.1□□□□□ -1.11
TRAF3IP1-204ENST00000462122 CNFNQ9BYD5 112 aa8.1□□□□□ -1.11
TRAF3IP1-204ENST00000462122 SAMD10Q9BYL1 202 aa8.1□□□□□ -1.11
TRAF3IP1-204ENST00000462122 A0A087WWL8 130 aa8.09□□□□□ -1.11
TRAF3IP1-204ENST00000462122 MUC21A0A0G2JKD1 596 aa8.09□□□□□ -1.11
TRAF3IP1-204ENST00000462122 MUC21A0A140T8X8 626 aa8.09□□□□□ -1.11
TRAF3IP1-204ENST00000462122 FAM231BA6NCW3 169 aa8.09□□□□□ -1.11
TRAF3IP1-204ENST00000462122 SMIM17P0DL12 118 aa8.09□□□□□ -1.11
TRAF3IP1-204ENST00000462122 NEGR1Q7Z3B1 354 aa8.09□□□□□ -1.11
TRAF3IP1-204ENST00000462122 TSKUQ8WUA8 353 aa8.09□□□□□ -1.11
TRAF3IP1-204ENST00000462122 GTSF1Q8WW33 167 aa8.09□□□□□ -1.11
TRAF3IP1-204ENST00000462122 GFRA4Q9GZZ7 299 aa8.09□□□□□ -1.11
TRAF3IP1-204ENST00000462122 TRGC1P0CF51 173 aa8.08□□□□□ -1.12
TRAF3IP1-204ENST00000462122 FOXA3P55318 350 aaPredicted RBP8.08□□□□□ -1.12
TRAF3IP1-204ENST00000462122 SSTP61278 116 aa8.08□□□□□ -1.12
TRAF3IP1-204ENST00000462122 PNRC1Q12796 327 aaPredicted RBP8.08□□□□□ -1.12
TRAF3IP1-204ENST00000462122 OR10G8Q8NGN5 311 aa8.08□□□□□ -1.12
TRAF3IP1-204ENST00000462122 LINC00588Q9Y4M8 146 aa8.08□□□□□ -1.12
TRAF3IP1-204ENST00000462122 V9GYV3 84 aa8.08□□□□□ -1.12
TRAF3IP1-204ENST00000462122 NACAE9PAV3 2078 aa8.07□□□□□ -1.12
TRAF3IP1-204ENST00000462122 NTF3P20783 257 aa8.07□□□□□ -1.12
TRAF3IP1-204ENST00000462122 RAB4BP61018 213 aa8.07□□□□□ -1.12
TRAF3IP1-204ENST00000462122 ZNF56Q15929 161 aa8.07□□□□□ -1.12
TRAF3IP1-204ENST00000462122 C14orf178Q8N769 122 aaPredicted RBP8.07□□□□□ -1.12
TRAF3IP1-204ENST00000462122 BORCS7Q96B45 105 aa8.07□□□□□ -1.12
TRAF3IP1-204ENST00000462122 TRBV10-1A0A0K0K1A3 114 aa8.06□□□□□ -1.12
TRAF3IP1-204ENST00000462122 LOC100131303A0A0U1RQF7 123 aa8.06□□□□□ -1.12
TRAF3IP1-204ENST00000462122 LINC00862A6NCI5 91 aa8.06□□□□□ -1.12
TRAF3IP1-204ENST00000462122 HIGD1CA8MV81 97 aa8.06□□□□□ -1.12
TRAF3IP1-204ENST00000462122 TWIST1Q15672 202 aa8.06□□□□□ -1.12
TRAF3IP1-204ENST00000462122 ESRGQ1W209 222 aa8.06□□□□□ -1.12
TRAF3IP1-204ENST00000462122 Q6ZSN1 163 aa8.06□□□□□ -1.12
TRAF3IP1-204ENST00000462122 COMMD7Q86VX2 200 aa8.06□□□□□ -1.12
TRAF3IP1-204ENST00000462122 UPK3BQ9BT76 320 aa8.06□□□□□ -1.12
TRAF3IP1-204ENST00000462122 MSRB1Q9NZV6 116 aa8.06□□□□□ -1.12
TRAF3IP1-204ENST00000462122 MRPS16Q9Y3D3 137 aaKnown RBP8.06□□□□□ -1.12
TRAF3IP1-204ENST00000462122 KIF25-AS1Q9Y6Z4 181 aa8.06□□□□□ -1.12
TRAF3IP1-204ENST00000462122 TMEM218A2RU14 115 aa8.05□□□□□ -1.12
TRAF3IP1-204ENST00000462122 PPP1R2P9O14990 202 aa8.05□□□□□ -1.12
TRAF3IP1-204ENST00000462122 LYPD5Q6UWN5 251 aa8.05□□□□□ -1.12
TRAF3IP1-204ENST00000462122 SMIM15Q7Z3B0 74 aa8.05□□□□□ -1.12
TRAF3IP1-204ENST00000462122 ZNRF2Q8NHG8 242 aa8.05□□□□□ -1.12
TRAF3IP1-204ENST00000462122 PGLYRP4Q96LB8 373 aa8.05□□□□□ -1.12
TRAF3IP1-204ENST00000462122 DPH3P1Q9H4G8 78 aa8.05□□□□□ -1.12
TRAF3IP1-204ENST00000462122 NAT8BQ9UHF3 227 aa8.05□□□□□ -1.12
TRAF3IP1-204ENST00000462122 DNAH2Q9P225 4427 aa8.04□□□□□ -1.12
TRAF3IP1-204ENST00000462122 A0A1B0GUT8 65 aa8.04□□□□□ -1.12
TRAF3IP1-204ENST00000462122 GAGE12JA6NER3 117 aa8.04□□□□□ -1.12
TRAF3IP1-204ENST00000462122 F5H697 171 aa8.04□□□□□ -1.12
TRAF3IP1-204ENST00000462122 F8W036 122 aa8.04□□□□□ -1.12
TRAF3IP1-204ENST00000462122 LINC00694P0DN24 101 aa8.04□□□□□ -1.12
TRAF3IP1-204ENST00000462122 EVI2AP22794 236 aa8.04□□□□□ -1.12
TRAF3IP1-204ENST00000462122 TIRAPP58753 221 aa8.04□□□□□ -1.12
TRAF3IP1-204ENST00000462122 LINC00315P59091 139 aa8.04□□□□□ -1.12
TRAF3IP1-204ENST00000462122 GAGE1Q13065 139 aa8.04□□□□□ -1.12
TRAF3IP1-204ENST00000462122 GAGE4Q13068 117 aa8.04□□□□□ -1.12
TRAF3IP1-204ENST00000462122 GAGE5Q13069 117 aa8.04□□□□□ -1.12
TRAF3IP1-204ENST00000462122 GAGE13Q4V321 117 aa8.04□□□□□ -1.12
TRAF3IP1-204ENST00000462122 SMIM27A0A1W2PRY6 76 aa8.03□□□□□ -1.12
TRAF3IP1-204ENST00000462122 H7C1H1 209 aa8.03□□□□□ -1.12
TRAF3IP1-204ENST00000462122 MGPP08493 103 aa8.03□□□□□ -1.12
TRAF3IP1-204ENST00000462122 RPL36AP83881 106 aaKnown RBP8.03□□□□□ -1.12
TRAF3IP1-204ENST00000462122 NUP35Q8NFH5 326 aa8.03□□□□□ -1.12
TRAF3IP1-204ENST00000462122 ATP6V0E2Q8NHE4 81 aa8.03□□□□□ -1.12
TRAF3IP1-204ENST00000462122 RPL36ALQ969Q0 106 aaKnown RBP8.03□□□□□ -1.12
TRAF3IP1-204ENST00000462122 SEC11CQ9BY50 192 aa8.03□□□□□ -1.12
TRAF3IP1-204ENST00000462122 TRBV7-3A0A075B6L6 115 aa8.02□□□□□ -1.13
TRAF3IP1-204ENST00000462122 MT-ND4LP03901 98 aa8.02□□□□□ -1.13
TRAF3IP1-204ENST00000462122 ADCYAP1P18509 176 aa8.02□□□□□ -1.13
TRAF3IP1-204ENST00000462122 RIGQ13278 110 aa8.02□□□□□ -1.13
TRAF3IP1-204ENST00000462122 ANAPC16Q96DE5 110 aa8.02□□□□□ -1.13
TRAF3IP1-204ENST00000462122 GTSF1LQ9H1H1 148 aa8.02□□□□□ -1.13
TRAF3IP1-204ENST00000462122 Q9H8V8 135 aa8.02□□□□□ -1.13
TRAF3IP1-204ENST00000462122 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.01□□□□□ -1.13
TRAF3IP1-204ENST00000462122 Q9UF83 564 aa8.01□□□□□ -1.13
TRAF3IP1-204ENST00000462122 DNAH10Q8IVF4 4471 aa8.01□□□□□ -1.13
TRAF3IP1-204ENST00000462122 IGLV2-18A0A075B6J9 118 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms