RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 TIRAPP58753 221 aa6.05□□□□□ -1.44
LDB1-203ENST00000461873 MEF2BQ02080 365 aaPredicted RBP6.05□□□□□ -1.44
LDB1-203ENST00000461873 ZNF674Q2M3X9 581 aa6.05□□□□□ -1.44
LDB1-203ENST00000461873 PTH2Q96A98 100 aa6.05□□□□□ -1.44
LDB1-203ENST00000461873 LINC00479Q96M42 142 aa6.05□□□□□ -1.44
LDB1-203ENST00000461873 DERL1Q9BUN8 251 aa6.05□□□□□ -1.44
LDB1-203ENST00000461873 A0A087WWC5 75 aa6.04□□□□□ -1.44
LDB1-203ENST00000461873 LOC100131303A0A0U1RQF7 123 aa6.04□□□□□ -1.44
LDB1-203ENST00000461873 PGPEP1LA6NFU8 196 aa6.04□□□□□ -1.44
LDB1-203ENST00000461873 F8W036 122 aa6.04□□□□□ -1.44
LDB1-203ENST00000461873 M0R036 132 aa6.04□□□□□ -1.44
LDB1-203ENST00000461873 IGHV3-30P01768 117 aa6.04□□□□□ -1.44
LDB1-203ENST00000461873 IGHV3-33P01772 117 aa6.04□□□□□ -1.44
LDB1-203ENST00000461873 S100A9P06702 114 aaKnown RBP6.04□□□□□ -1.44
LDB1-203ENST00000461873 IGHV3-30-3P0DP02 117 aa6.04□□□□□ -1.44
LDB1-203ENST00000461873 IGHV3-30-5P0DP03 117 aa6.04□□□□□ -1.44
LDB1-203ENST00000461873 LELP1Q5T871 98 aa6.04□□□□□ -1.44
LDB1-203ENST00000461873 FAM74A4Q5TZK3 123 aa6.04□□□□□ -1.44
LDB1-203ENST00000461873 ZFP2Q6ZN57 461 aa6.04□□□□□ -1.44
LDB1-203ENST00000461873 Q86TA4 180 aa6.04□□□□□ -1.44
LDB1-203ENST00000461873 C9orf85Q96MD7 179 aa6.04□□□□□ -1.44
LDB1-203ENST00000461873 TM2D2Q9BX73 214 aa6.04□□□□□ -1.44
LDB1-203ENST00000461873 GTSF1LQ9H1H1 148 aa6.04□□□□□ -1.44
LDB1-203ENST00000461873 Q9HAA7 133 aa6.04□□□□□ -1.44
LDB1-203ENST00000461873 SCRT2Q9NQ03 307 aa6.04□□□□□ -1.44
LDB1-203ENST00000461873 IL36BQ9NZH7 164 aa6.04□□□□□ -1.44
LDB1-203ENST00000461873 GAGE12JA6NER3 117 aa6.03□□□□□ -1.44
LDB1-203ENST00000461873 H3BVH4 76 aa6.03□□□□□ -1.44
LDB1-203ENST00000461873 M0R381 172 aa6.03□□□□□ -1.44
LDB1-203ENST00000461873 IGLV2-11P01706 119 aa6.03□□□□□ -1.44
LDB1-203ENST00000461873 ADCYAP1P18509 176 aa6.03□□□□□ -1.44
LDB1-203ENST00000461873 GAGE1Q13065 139 aa6.03□□□□□ -1.44
LDB1-203ENST00000461873 GAGE4Q13068 117 aa6.03□□□□□ -1.44
LDB1-203ENST00000461873 GAGE5Q13069 117 aa6.03□□□□□ -1.44
LDB1-203ENST00000461873 GAGE13Q4V321 117 aa6.03□□□□□ -1.44
LDB1-203ENST00000461873 LINC01556Q5JQF7 62 aa6.03□□□□□ -1.44
LDB1-203ENST00000461873 PIK3CD-AS1Q5SR53 167 aa6.03□□□□□ -1.44
LDB1-203ENST00000461873 UQCC3Q6UW78 93 aa6.03□□□□□ -1.44
LDB1-203ENST00000461873 ZFP82Q8N141 532 aa6.03□□□□□ -1.44
LDB1-203ENST00000461873 TNFRSF18Q9Y5U5 241 aa6.03□□□□□ -1.44
LDB1-203ENST00000461873 RYR1P21817 5038 aa6.03□□□□□ -1.44
LDB1-203ENST00000461873 PCLOQ9Y6V0 5065 aa6.02□□□□□ -1.45
LDB1-203ENST00000461873 A0A087WTM6 91 aa6.02□□□□□ -1.45
LDB1-203ENST00000461873 TMSB15BA0A087X1C1 80 aa6.02□□□□□ -1.45
LDB1-203ENST00000461873 IGLV5-52A0A0A0MRZ9 124 aa6.02□□□□□ -1.45
LDB1-203ENST00000461873 IGKV3D-20A0A0C4DH25 116 aa6.02□□□□□ -1.45
LDB1-203ENST00000461873 GRIFINA4D1Z8 144 aa6.02□□□□□ -1.45
LDB1-203ENST00000461873 SH2D1AO60880 128 aa6.02□□□□□ -1.45
LDB1-203ENST00000461873 ARMS2P0C7Q2 107 aa6.02□□□□□ -1.45
LDB1-203ENST00000461873 RNASE3P12724 160 aaKnown RBP6.02□□□□□ -1.45
LDB1-203ENST00000461873 KRTAP10-2P60368 255 aa6.02□□□□□ -1.45
LDB1-203ENST00000461873 RMI2Q96E14 147 aa6.02□□□□□ -1.45
LDB1-203ENST00000461873 PARLQ9H300 379 aa6.02□□□□□ -1.45
LDB1-203ENST00000461873 C11orf21Q9P2W6 132 aa6.02□□□□□ -1.45
LDB1-203ENST00000461873 A0A087WX48 190 aa6.01□□□□□ -1.45
LDB1-203ENST00000461873 TRAV8-3A0A0A6YYJ7 113 aa6.01□□□□□ -1.45
LDB1-203ENST00000461873 ZNF727A8MUV8 499 aa6.01□□□□□ -1.45
LDB1-203ENST00000461873 PDE6DO43924 150 aa6.01□□□□□ -1.45
LDB1-203ENST00000461873 APOC3P02656 99 aa6.01□□□□□ -1.45
LDB1-203ENST00000461873 SMIM17P0DL12 118 aa6.01□□□□□ -1.45
LDB1-203ENST00000461873 GCSHP23434 173 aa6.01□□□□□ -1.45
LDB1-203ENST00000461873 TAGLN2P37802 199 aaKnown RBP6.01□□□□□ -1.45
LDB1-203ENST00000461873 RPL36AP83881 106 aaKnown RBP6.01□□□□□ -1.45
LDB1-203ENST00000461873 FRZBQ92765 325 aa6.01□□□□□ -1.45
LDB1-203ENST00000461873 RPL36ALQ969Q0 106 aaKnown RBP6.01□□□□□ -1.45
LDB1-203ENST00000461873 DAZAP1Q96EP5 407 aaKnown RBP6.01□□□□□ -1.45
LDB1-203ENST00000461873 ZC2HC1AQ96GY0 325 aa6.01□□□□□ -1.45
LDB1-203ENST00000461873 SMIM7Q9BQ49 75 aa6.01□□□□□ -1.45
LDB1-203ENST00000461873 KRTAP17-1Q9BYP8 105 aa6.01□□□□□ -1.45
LDB1-203ENST00000461873 COX11Q9Y6N1 276 aa6.01□□□□□ -1.45
LDB1-203ENST00000461873 IBA57-AS1B1ANH7 110 aa6□□□□□ -1.45
LDB1-203ENST00000461873 EPM2AB3EWF7 344 aa6□□□□□ -1.45
LDB1-203ENST00000461873 KRBOX1C9JBD0 128 aa6□□□□□ -1.45
LDB1-203ENST00000461873 F5H697 171 aa6□□□□□ -1.45
LDB1-203ENST00000461873 RPL35P42766 123 aaKnown RBP6□□□□□ -1.45
LDB1-203ENST00000461873 LAGE3Q14657 143 aa6□□□□□ -1.45
LDB1-203ENST00000461873 ELOBQ15370 118 aa6□□□□□ -1.45
LDB1-203ENST00000461873 SPANXN1Q5VSR9 72 aa6□□□□□ -1.45
LDB1-203ENST00000461873 ATRAIDQ6UW56 229 aa6□□□□□ -1.45
LDB1-203ENST00000461873 Q6ZRN7 208 aaPredicted RBP6□□□□□ -1.45
LDB1-203ENST00000461873 BAGE2Q86Y30 109 aa6□□□□□ -1.45
LDB1-203ENST00000461873 Q8N1X5 172 aa6□□□□□ -1.45
LDB1-203ENST00000461873 NTN5Q8WTR8 489 aaPredicted RBP6□□□□□ -1.45
LDB1-203ENST00000461873 SEC11CQ9BY50 192 aa6□□□□□ -1.45
LDB1-203ENST00000461873 SMDT1Q9H4I9 107 aa6□□□□□ -1.45
LDB1-203ENST00000461873 TRBV20OR9-2A0A075B6H5 130 aa5.99□□□□□ -1.45
LDB1-203ENST00000461873 A0A087WWL8 130 aa5.99□□□□□ -1.45
LDB1-203ENST00000461873 TRBV6-1A0A0K0K1D8 114 aa5.99□□□□□ -1.45
LDB1-203ENST00000461873 A6NJY4 79 aa5.99□□□□□ -1.45
LDB1-203ENST00000461873 TMEM262E9PQX1 116 aa5.99□□□□□ -1.45
LDB1-203ENST00000461873 TMEM250H0YL14 139 aa5.99□□□□□ -1.45
LDB1-203ENST00000461873 SCO1O75880 301 aa5.99□□□□□ -1.45
LDB1-203ENST00000461873 LTAP01374 205 aa5.99□□□□□ -1.45
LDB1-203ENST00000461873 S100A1P23297 94 aa5.99□□□□□ -1.45
LDB1-203ENST00000461873 ZNF56Q15929 161 aa5.99□□□□□ -1.45
LDB1-203ENST00000461873 TMEM241Q24JQ0 296 aa5.99□□□□□ -1.45
LDB1-203ENST00000461873 C10orf91Q5T1B1 145 aa5.99□□□□□ -1.45
LDB1-203ENST00000461873 PRR27Q6MZM9 219 aa5.99□□□□□ -1.45
LDB1-203ENST00000461873 OCC1Q8TAD7 63 aa5.99□□□□□ -1.45
LDB1-203ENST00000461873 C11orf52Q96A22 123 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms