RNA–Protein interactions for RNA: ENST00000461674.5

LRCH3-210, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 537 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-210ENST00000461674 HIGD2AQ9BW72 106 aa4.32□□□□□ -1.72
LRCH3-210ENST00000461674 SOX21Q9Y651 276 aaPredicted RBP4.32□□□□□ -1.72
LRCH3-210ENST00000461674 R4GN34 69 aa4.32□□□□□ -1.72
LRCH3-210ENST00000461674 HSPE1-MOB4S4R3N1 261 aa4.32□□□□□ -1.72
LRCH3-210ENST00000461674 SDK2Q58EX2 2172 aa4.31□□□□□ -1.72
LRCH3-210ENST00000461674 FAM236AA0A1B0GUQ0 79 aa4.31□□□□□ -1.72
LRCH3-210ENST00000461674 FAM236BA0A1B0GV22 79 aa4.31□□□□□ -1.72
LRCH3-210ENST00000461674 C20orf202A1L168 122 aa4.31□□□□□ -1.72
LRCH3-210ENST00000461674 CPSF4O95639 269 aaKnown RBP4.31□□□□□ -1.72
LRCH3-210ENST00000461674 HBDP02042 147 aa4.31□□□□□ -1.72
LRCH3-210ENST00000461674 S100A8P05109 93 aa4.31□□□□□ -1.72
LRCH3-210ENST00000461674 COX6B1P14854 86 aa4.31□□□□□ -1.72
LRCH3-210ENST00000461674 LSM3P62310 102 aaKnown RBP4.31□□□□□ -1.72
LRCH3-210ENST00000461674 MRPS36P82909 103 aaKnown RBP4.31□□□□□ -1.72
LRCH3-210ENST00000461674 PLGLB1Q02325 96 aa4.31□□□□□ -1.72
LRCH3-210ENST00000461674 EIF4EBP1Q13541 118 aaPredicted RBP4.31□□□□□ -1.72
LRCH3-210ENST00000461674 Q6P435 159 aa4.31□□□□□ -1.72
LRCH3-210ENST00000461674 RPS19BP1Q86WX3 136 aaKnown RBP4.31□□□□□ -1.72
LRCH3-210ENST00000461674 DEFB106AQ8N104 65 aa4.31□□□□□ -1.72
LRCH3-210ENST00000461674 NAA38Q9BRA0 125 aaKnown RBP4.31□□□□□ -1.72
LRCH3-210ENST00000461674 SCN3BQ9NY72 215 aa4.31□□□□□ -1.72
LRCH3-210ENST00000461674 ANAPC11Q9NYG5 84 aa4.31□□□□□ -1.72
LRCH3-210ENST00000461674 MALRD1Q5VYJ5 2156 aa4.31□□□□□ -1.72
LRCH3-210ENST00000461674 ZFC3H1O60293 1989 aaKnown RBP4.31□□□□□ -1.72
LRCH3-210ENST00000461674 TP53BP1Q12888 1972 aaPredicted RBP4.31□□□□□ -1.72
LRCH3-210ENST00000461674 STAB1Q9NY15 2570 aa4.3□□□□□ -1.72
LRCH3-210ENST00000461674 SHANK1Q9Y566 2161 aa4.3□□□□□ -1.72
LRCH3-210ENST00000461674 COLCA2A8K830 154 aa4.3□□□□□ -1.72
LRCH3-210ENST00000461674 TRGC1P0CF51 173 aa4.3□□□□□ -1.72
LRCH3-210ENST00000461674 FGF7P21781 194 aa4.3□□□□□ -1.72
LRCH3-210ENST00000461674 CDK5R1Q15078 307 aa4.3□□□□□ -1.72
LRCH3-210ENST00000461674 Q6ZQT0 140 aa4.3□□□□□ -1.72
LRCH3-210ENST00000461674 WFDC11Q8NEX6 87 aa4.3□□□□□ -1.72
LRCH3-210ENST00000461674 FDCSPQ8NFU4 85 aa4.3□□□□□ -1.72
LRCH3-210ENST00000461674 CCL4L1Q8NHW4 92 aa4.3□□□□□ -1.72
LRCH3-210ENST00000461674 DEDD2Q8WXF8 326 aa4.3□□□□□ -1.72
LRCH3-210ENST00000461674 PSMG3Q9BT73 122 aaPredicted RBP4.3□□□□□ -1.72
LRCH3-210ENST00000461674 CCDC167Q9P0B6 97 aa4.3□□□□□ -1.72
LRCH3-210ENST00000461674 TANC2Q9HCD6 1990 aa4.3□□□□□ -1.72
LRCH3-210ENST00000461674 MED13LQ71F56 2210 aa4.3□□□□□ -1.72
LRCH3-210ENST00000461674 CSMD2Q7Z408 3487 aa4.3□□□□□ -1.72
LRCH3-210ENST00000461674 AKAP9Q99996 3911 aa4.29□□□□□ -1.72
LRCH3-210ENST00000461674 IGHV3-64A0A075B6Q5 118 aa4.29□□□□□ -1.72
LRCH3-210ENST00000461674 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.29□□□□□ -1.72
LRCH3-210ENST00000461674 SYNGR2O43760 224 aa4.29□□□□□ -1.72
LRCH3-210ENST00000461674 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.29□□□□□ -1.72
LRCH3-210ENST00000461674 OR5D14Q8NGL3 314 aa4.29□□□□□ -1.72
LRCH3-210ENST00000461674 CHCHD1Q96BP2 118 aaKnown RBP4.29□□□□□ -1.72
LRCH3-210ENST00000461674 OR4C12Q96R67 309 aa4.29□□□□□ -1.72
LRCH3-210ENST00000461674 KRTAP4-9Q9BYQ8 210 aa4.29□□□□□ -1.72
LRCH3-210ENST00000461674 COMMD3Q9UBI1 195 aa4.29□□□□□ -1.72
LRCH3-210ENST00000461674 PKDREJQ9NTG1 2253 aa4.28□□□□□ -1.72
LRCH3-210ENST00000461674 TACC2O95359 2948 aa4.28□□□□□ -1.72
LRCH3-210ENST00000461674 A0A0J9YX75 114 aa4.28□□□□□ -1.72
LRCH3-210ENST00000461674 LOC100130705A0A1B0GUX0 176 aa4.28□□□□□ -1.72
LRCH3-210ENST00000461674 CDC42EP2O14613 210 aa4.28□□□□□ -1.72
LRCH3-210ENST00000461674 SHBGP04278 402 aa4.28□□□□□ -1.72
LRCH3-210ENST00000461674 TPT1P13693 172 aaKnown RBP4.28□□□□□ -1.72
LRCH3-210ENST00000461674 CCSMST1Q4G0I0 132 aa4.28□□□□□ -1.72
LRCH3-210ENST00000461674 LINC00311Q8N616 119 aa4.28□□□□□ -1.72
LRCH3-210ENST00000461674 CSPG4Q6UVK1 2322 aa4.28□□□□□ -1.72
LRCH3-210ENST00000461674 NCKAP5O14513 1909 aa4.27□□□□□ -1.73
LRCH3-210ENST00000461674 JMJD1CQ15652 2540 aa4.27□□□□□ -1.73
LRCH3-210ENST00000461674 OR51F1A6NGY5 319 aa4.27□□□□□ -1.73
LRCH3-210ENST00000461674 KRTAP1-4P0C5Y4 121 aa4.27□□□□□ -1.73
LRCH3-210ENST00000461674 HIST1H1BP16401 226 aaKnown RBP4.27□□□□□ -1.73
LRCH3-210ENST00000461674 RELAQ04206 551 aa4.27□□□□□ -1.73
LRCH3-210ENST00000461674 IZUMO2Q6UXV1 221 aa4.27□□□□□ -1.73
LRCH3-210ENST00000461674 AAED1Q7RTV5 226 aa4.27□□□□□ -1.73
LRCH3-210ENST00000461674 PATE1Q8WXA2 126 aa4.27□□□□□ -1.73
LRCH3-210ENST00000461674 PP6455Q8WZ26 134 aa4.27□□□□□ -1.73
LRCH3-210ENST00000461674 COX14Q96I36 57 aa4.27□□□□□ -1.73
LRCH3-210ENST00000461674 CST9LQ9H4G1 147 aa4.27□□□□□ -1.73
LRCH3-210ENST00000461674 DNAJC15Q9Y5T4 150 aa4.27□□□□□ -1.73
LRCH3-210ENST00000461674 DIDO1Q9BTC0 2240 aaKnown RBP4.27□□□□□ -1.73
LRCH3-210ENST00000461674 NBEAL1Q6ZS30 2694 aa4.27□□□□□ -1.73
LRCH3-210ENST00000461674 IGLV4-60A0A075B6I1 120 aa4.26□□□□□ -1.73
LRCH3-210ENST00000461674 CTSDP07339 412 aaPredicted RBP4.26□□□□□ -1.73
LRCH3-210ENST00000461674 NNATQ16517 81 aa4.26□□□□□ -1.73
LRCH3-210ENST00000461674 ESRGQ1W209 222 aa4.26□□□□□ -1.73
LRCH3-210ENST00000461674 SCIMPQ6UWF3 145 aa4.26□□□□□ -1.73
LRCH3-210ENST00000461674 KLK12Q9UKR0 248 aa4.26□□□□□ -1.73
LRCH3-210ENST00000461674 COL6A5A8TX70 2615 aa4.26□□□□□ -1.73
LRCH3-210ENST00000461674 FN1P02751 2386 aaKnown RBP4.25□□□□□ -1.73
LRCH3-210ENST00000461674 A0A1B0GVG6 124 aa4.25□□□□□ -1.73
LRCH3-210ENST00000461674 BBIP1A8MTZ0 92 aa4.25□□□□□ -1.73
LRCH3-210ENST00000461674 LYRM1O43325 122 aa4.25□□□□□ -1.73
LRCH3-210ENST00000461674 OR1I1O60431 355 aa4.25□□□□□ -1.73
LRCH3-210ENST00000461674 KLF7O75840 302 aaPredicted RBP4.25□□□□□ -1.73
LRCH3-210ENST00000461674 AKAIN1P0CW23 69 aa4.25□□□□□ -1.73
LRCH3-210ENST00000461674 SNRPD3P62318 126 aaKnown RBP4.25□□□□□ -1.73
LRCH3-210ENST00000461674 MEIG1Q5JSS6 88 aa4.25□□□□□ -1.73
LRCH3-210ENST00000461674 Q8IYB0 196 aa4.25□□□□□ -1.73
LRCH3-210ENST00000461674 TAS2R4Q9NYW5 299 aa4.25□□□□□ -1.73
LRCH3-210ENST00000461674 ABCA4P78363 2273 aa4.25□□□□□ -1.73
LRCH3-210ENST00000461674 ATRQ13535 2644 aa4.25□□□□□ -1.73
LRCH3-210ENST00000461674 CPAMD8Q8IZJ3 1885 aa4.24□□□□□ -1.73
LRCH3-210ENST00000461674 A0A0G2JMM0 328 aa4.24□□□□□ -1.73
LRCH3-210ENST00000461674 A0A1W2PPB8 328 aa4.24□□□□□ -1.73
LRCH3-210ENST00000461674 KIR3DP1A8MWS1 328 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms